Cucsa.154500 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAATATAATCAGCAAACTTCGGAACTTGGATGCTTACCCTAAAATTAATGAGGATTTCTACAGCCGCACGCTTTCCGGTGGCGTTATCACGCTTTCCTCATCCATTCTTATGCTCTTGCTATTCATATCTGAGCTACGTAGGTTTCTTCCTCCCTGCCTTTTTTCTTCTCTTCCCTACATCCATTATTGAATCTACGTCTTAGTCTTACCCCAATGTGTGTTACAATTCAATTTTATGTTTTTCTCTATGTAGAATCTTTATTTTTCTTTTTTCTTTTTTAATGTTTTCAAGCTTTGATTGGTGTTTACCACTTCCCAGTTGTTGTTCAATGTGGTACATTATTGAGTCATACGTTTACTTTTGTTGGCGCCATTAGTTTTCTCTTTGTCAGATTGCATTGGGGTTATGTATTATCGACAGAGTTTAGTTTATATGTTTATCATCAGAGTTTAACTCATATGTTTACTAATATATCATGCACTCATTAATCTACACTCCAAGTAACTTCCTCCTGCTTCAGAACGGTACTGGTATACTATGGAAAGTGTTAAGGTCCTTGGGGGCTCTGTATTTTGGTATCAGTGCAATTGATTTTTtGTTTtCTTGCTGTTCTTGCCTGAGCATATGCTCTCTAATGCTTGAAAATCTCATTGGTTGCAGGGTTATATCTCCATGCTGTAACAGAAACCAAGCTCGTAGTTGATACATCAAGGGGAGAAACCCTTCGTATCAATGTAATCCCACATTGTTTCTGGATATTTCTAATATTATGCATCAAAATCTGTTTTtCTTTtCTCTCTTGGAAATTATACATCTTCTTTTTTATTTTCAGTTTGATGTTACCTTTCCTGCCCTTCCTTGTTCTTTATTAAGTCTTGATGCAATGGACATCAGTGGAGAGCAACACCTGGATGTGGTGCGTATGATGATTGCATAGTCTTTTCTCTCCTTGTCTAAAATATGTAAATTATTTGAAATTGAGTTGTTAAGTGCATGCCATGAATGTATGGTGCAAGATTTACATATTGTTTTCCCCTGTATGCAGAAACATGACATAATCAAAAAAAGGTTGGACTCTCATGGCAATGCTATCGAAGCTAGACCAGATGGGATTGGTGCACCTAAGGTTCGTAATGTTCCAACAATTTAAATTCCTATTACTTCCTTTCTCTTTTTCCATTTGTTGAACCATATGGAACTAATCCAATCTATGCTCAATAGGAAACTCTCTCATCTAGTCACCATTGATTCGGCTTTGGATTATATATATTTTTAGATTGCCATAACTTTTGAAAAATGATTTATTGATAGTTGTTGATTTTATTTAGTATTACTGTATTAGACCAATCCAAAACCAACCAACAAATGATTTATTCGCAGCTCCCTTAGACTAGAACTCTGTTATTCTTCTTTCAGAATAGATTTGTATATGCAGTGTATCTTTGTGAGAATGTAATTGGGGAAAACACATGCAGCTAGATAATGAAGTATTTTATCAGAAATACAAAAATTGGTGTAGTGGGTTTAGTTTCCTAAGTTGAAGATTAGGGATGCTCATCTGCGGACATTTTAAGATTGGTGTAGTGGGTTTGGTTTAAGTTGAAGATTAATGATTTAGAGTTAAAGCTTTGCTGCATTGATGTGAAGAAAATGATATTGTGTTTAATCTACTACCCAAGTGAACCAAAGGATGAGGCACGGTGTAGGATAGAATGGATGCAATATGATAAATGATGGTTTAAATGCATTGGGACTCTAACGCACCAGAACAAGTTGAAGAACTCGAGAGGCCGTTTACTGAATCAGAGATTTGGAGGGCCATGTCCAACCTTCACCGTACTAGACAGGCCCACCAGGGAATTCTTTAGAAAGCTTTAGAACATTCTTAAGGCAGATAATACAAGGGTGTTCAAAGACTTTTTGATAACTTCATTACTAGCGTCAACCCTAACGAGATTTATAAGTTATATCTCCCCCATCCCCAAAAAATCAGATGAGAGAATGGTGGGAGACTATAAACCCTTGATAATGTATTGACAATTAAAGGACTTGGAGTCAACTGGAGGAAATGGATTAAAGGTTGTATTTCCACACCATTGCTTATTAATCATGGACAAAAGAGGGGGTGATCACTAAACTTGTCATCAAAAAGGCTTTCAACATTGTCGATTGGGACTTCCTTGACAATATATTGACAGTTAAAGGATTTGGGACCAAATGGAGGAAATGGGTCAAAGGTTGTATTTCCACAACATTGTGGATGTTTGGATTAAACTCCTCATCTCCGAAGGTGGCCTTGGGTTTAATGACATTAAAATTAAAAATCAAAGCCTCCTTGCCAAGTGGATTTGGAGATACCGTGGGGAAATTTTGACCCTTTAGAGATGTACGTACCTTTAGGTGTTGGGTTTCCTCTATTACTTTCATTTGGTGAAATGGTTCTTTATCCTAAAAaTAAAAaGTATTATTGATGCGAAGTATATCTCTTCTCTCCAACCGAGCCAACCTACTCTCAAACTGTTCAGGAGGCCACGAAAATTTATCATCCAGCAAAAGGATTTGATTCTCTACAACATTATGTGCAATATTGGAAATGGGGCACTTTTCTTCCCTTAAGCATGCTTTTCCAGATTATATGCTCTTACCTTCACAAAAAATCCAACACTACATCTTGAGATTTACATTTGAGAAGACATCTCACCGGAAACGAAATCATCGAATGGTCCCACCTATCTACTATTATTTCCCCCCTCCCCATCCCCTGATGGAGGATGGATGAAAATGGCCCATGGATTCAAAAGGATCATTCACAGACTCACAGTTAGGTCTGTATCCTATATAAACTTTTTCTAGTGAAATCACCCATCTAAAAGATCTATACCCTACTATCATCTGGAAAGGACTCATCCCACCCCTAAGTAGTGTACCTTTTGTCACAAGAACAATCAAACTATTATGCCCCCCTTCGTCAACTGTGAATCTGCTCATGGCTTTTGGTCCAAGTTATTGGGGGCTCTCAACTACCCCATGGTTTTTCGTGATAACACACTGATCCTCCTAGTGGCACTCCTCATTAGTCACCTTTTCAAAAAGGAAAAAGAGGTCATTTGGAATTGCTTTGTTAAAACCTTTTTTTGGCTTATCTGGTTTGAACGAGACTGGAGAATCTTTGATGTCAAAGCTATGGATTTCTCTTTTTTTTTTttAACATCTCATATACATAACTTTCTCTTGGTGTAAATTTACCACATTCTTTTGTGATTACAGTCTACTCCTATTATATCCCAGTGAAACTGTCTCATGTAATCATCATTTACCCTTTTGTTAATTCATTTGATCAAATTAAATCACCATTGACGTTTCTCATAAAAAATAATGCCTTTTCTCAATCTGGCATTACTGCTGTTATTTAATTTCCCTTTTTTGGCTATTCTTCATTTGACGTTGCACAGATTGAAAAGCCCTTACAGAGACATGGTGGTAGGCTTGAGCACAATGAGACATATTGTGGTTCCTGCTTTGGAGCTGAATCAGTAAGAACTTTTCTTTCCTTTTTCTTATtCTTTTTTTtCCTTTTAGTTTTATATTTATTTATTTATTTTTATGAATACCTGAAATTTCTGTCAAAAAATTGAAGAAATACAAGGGGATACAAAAATAAAAaCCCATAAAAATATGAACGTTTTTGTCATATTAGTAATTGTTGAATGTAGTTTCTTGGTTGCATGACTTGCCTCTAAATAATTGATATGTTAGAAATTCTTATAGAAGCTGATGAGGCTGTTTTGGTGTTAGGTTGACTGTGCAATCCTATAAGTGATATCATATAACCATGTCCAGTTATTTTGATACATTTAATTAGTGTAATTGGACTGAATGAATTAAACCGTTGGCAGTGGTTATGTCATTTCGAGTTGtACTTTTtTTTTTtCTTTTCTTCTTGTATTCCTTTCTGTTCTCTCTTCTTCCTTTTAAGAGGTGGCTCATTGTGGATTAACATATTTGGTTCTACATCCTTCCTCCTGCTCTCTCACAGTCACTTAACCCTTTTTTtATGAAAAAAAAAAaaTCTCTAATATTTGCAGGCAGATGATGATTGTTGCAATTCGTGTGAGGAAGTTCGTGAGGCTTATCGAAAGAAAGGATGGGCTTTGTCAAACCCAGATTTGATTGACCAGGTTTGTCAGGACAAGGCTCCTATTTTACAGATTCCTTTTATCCATACAATTTTCAAGTTGGCTTCCAACCAAGTTTGTTTATCTGGAATTAATTGTACAAATGTATTCATATGGAACCTCTGCGTGTTTTTTtAATTCGGAACTTGAATTTTATTAAAACATAAATATCTTATGTTTAACTTATCTACTAATTGACATGGGTGATACCTTCCATCTTTTGGCCATCCTGGCCATGATGATGTTTTCTGCTCTGCGTTTTGTGATATAACTTCTTGACATACATGTGAACTATTGCAGCTGATCTTGAAAGCATAATAATCCCATAGTTCAAAGATTTTTTGATGATGCTCATTGATTGTGACCTATATCTGGGATACAATGTTGATCTCAGATTTCATTGAACTATAGCTTACCCCAGCTTTTTtATGTACAATCCAGTTGTCTTGAGCAATCTTTAGAGAATTTTCTATCAATGCATCTGCTATTTATCATTGGGCTTTTTAGGCTTTCTATTTATTAATTCTTTTATATGAAACTTTATTGTTATCATTATTAAACTGGGTTTTATGAACATTGTTTTTCCTTCCATTATTATGTAGTCTTTATTTTATGCAAGGAGCATCAGTTAGAGAATATAGTTTTTCTAGGGATACCTTGCTGACCCTTAAATTTTCTCTAAATGTCATCTGGAATAATATTAGTTACCTGATACTATAGGGATTACAGTTTTCTGTTAATGGGATTATTTTAAGTATGATCTTGTCTTATTCATTATCGTACCAAATCTTTATGACGTTCAGTGCAAAAGAGAAGGGTTTCTTCAACGGATCAAAGATGAGGATGGTGAAGGATGCAATATATACGGATTTTTGGAGGTTAATAAGGTTGCTGGAAATTTCCATTTCGCACCTGGGAAAAGTTTTCAACAGTCGAATGTTCATGTTCACGATCTGTTGGCTTTCCAAAAGGATAGCTTCAAT ATGGATAATATAATCAGCAAACTTCGGAACTTGGATGCTTACCCTAAAATTAATGAGGATTTCTACAGCCGCACGCTTTCCGGTGGCGTTATCACGCTTTCCTCATCCATTCTTATGCTCTTGCTATTCATATCTGAGCTACagggggtgatcactaaacttgtcatcaaaaaggctttcaacattgtcgattgggacttccttgacaatatattgacagttaaaggatttgggaccaaatggaGGAAATGGGTCAAAGGTTGTATTTCCACAACATTGTGGATGTTTGGATTAAACTCCTCATCTCCGAAGTGCAAAAGAGAAGGGTTTCTTCAACGGATCAAAGATGAGGATGGTGAAGGATGCAATATATACGGATTTTTGGAGGTTAATAAGGTTGCTGGAAATTTCCATTTCGCACCTGGGAAAAGTTTTCAACAGTCGAATGTTCATGTTCACGATCTGTTGGCTTTCCAAAAGGATAGCTTCAAT ATGGATAATATAATCAGCAAACTTCGGAACTTGGATGCTTACCCTAAAATTAATGAGGATTTCTACAGCCGCACGCTTTCCGGTGGCGTTATCACGCTTTCCTCATCCATTCTTATGCTCTTGCTATTCATATCTGAGCTACAGGGGGTGATCACTAAACTTGTCATCAAAAAGGCTTTCAACATTGTCGATTGGGACTTCCTTGACAATATATTGACAGTTAAAGGATTTGGGACCAAATGGAGGAAATGGGTCAAAGGTTGTATTTCCACAACATTGTGGATGTTTGGATTAAACTCCTCATCTCCGAAGTGCAAAAGAGAAGGGTTTCTTCAACGGATCAAAGATGAGGATGGTGAAGGATGCAATATATACGGATTTTTGGAGGTTAATAAGGTTGCTGGAAATTTCCATTTCGCACCTGGGAAAAGTTTTCAACAGTCGAATGTTCATGTTCACGATCTGTTGGCTTTCCAAAAGGATAGCTTCAAT MDNIISKLRNLDAYPKINEDFYSRTLSGGVITLSSSILMLLLFISELQGVITKLVIKKAFNIVDWDFLDNILTVKGFGTKWRKWVKGCISTTLWMFGLNSSSPKCKREGFLQRIKDEDGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLAFQKDSFN
BLAST of Cucsa.154500 vs. Swiss-Prot
Match: ERGI3_XENTR (Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 9.4e-22 Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = 1
HSP 2 Score: 54.3 bits (129), Expect = 1.5e-06 Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 1
BLAST of Cucsa.154500 vs. Swiss-Prot
Match: ERGI3_DANRE (Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.1e-21 Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = 1
HSP 2 Score: 54.7 bits (130), Expect = 1.1e-06 Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 1
BLAST of Cucsa.154500 vs. Swiss-Prot
Match: ERGI3_PONAB (Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Pongo abelii GN=ERGIC3 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 8.0e-21 Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 1
HSP 2 Score: 53.5 bits (127), Expect = 2.5e-06 Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 1
BLAST of Cucsa.154500 vs. Swiss-Prot
Match: ERGI3_MOUSE (Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus GN=Ergic3 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 8.0e-21 Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 1
HSP 2 Score: 53.5 bits (127), Expect = 2.5e-06 Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 1
BLAST of Cucsa.154500 vs. Swiss-Prot
Match: ERGI3_BOVIN (Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Bos taurus GN=ERGIC3 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 8.0e-21 Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 1
HSP 2 Score: 53.5 bits (127), Expect = 2.5e-06 Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 1
BLAST of Cucsa.154500 vs. TrEMBL
Match: A0A0A0LJU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G307840 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.4e-27 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.154500 vs. TrEMBL
Match: A0A0A0LJU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G307840 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.2e-16 Identity = 51/61 (83.61%), Postives = 54/61 (88.52%), Query Frame = 1
HSP 2 Score: 129.4 bits (324), Expect = 4.0e-27 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.154500 vs. TrEMBL
Match: M5XT11_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007001mg PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 8.6e-14 Identity = 44/61 (72.13%), Postives = 54/61 (88.52%), Query Frame = 1
HSP 2 Score: 129.4 bits (324), Expect = 4.0e-27 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.154500 vs. TrEMBL
Match: B9RJH7_RICCO (Endoplasmic reticulum-Golgi intermediate compartment protein, putative OS=Ricinus communis GN=RCOM_1034540 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 8.6e-14 Identity = 42/48 (87.50%), Postives = 47/48 (97.92%), Query Frame = 1
HSP 2 Score: 129.4 bits (324), Expect = 4.0e-27 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.154500 vs. TrEMBL
Match: A0A067LB71_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15766 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.1e-12 Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 1
HSP 2 Score: 129.0 bits (323), Expect = 5.2e-27 Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.154500 vs. TAIR10
Match: AT1G36050.1 (AT1G36050.1 Endoplasmic reticulum vesicle transporter protein) HSP 1 Score: 124.8 bits (312), Expect = 5.0e-29 Identity = 56/61 (91.80%), Postives = 59/61 (96.72%), Query Frame = 1
HSP 2 Score: 78.6 bits (192), Expect = 4.1e-15 Identity = 41/61 (67.21%), Postives = 49/61 (80.33%), Query Frame = 1
BLAST of Cucsa.154500 vs. TAIR10
Match: AT1G22200.1 (AT1G22200.1 Endoplasmic reticulum vesicle transporter protein) HSP 1 Score: 102.4 bits (254), Expect = 2.6e-22 Identity = 43/71 (60.56%), Postives = 55/71 (77.46%), Query Frame = 1
HSP 2 Score: 77.8 bits (190), Expect = 6.9e-15 Identity = 37/48 (77.08%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of Cucsa.154500 vs. TAIR10
Match: AT3G22290.1 (AT3G22290.1 Endoplasmic reticulum vesicle transporter protein) HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06 Identity = 44/193 (22.80%), Postives = 75/193 (38.86%), Query Frame = 1
BLAST of Cucsa.154500 vs. NCBI nr
Match: gi|449465886|ref|XP_004150658.1| (PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Cucumis sativus]) HSP 1 Score: 131.0 bits (328), Expect = 2.0e-27 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.154500 vs. NCBI nr
Match: gi|449465886|ref|XP_004150658.1| (PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Cucumis sativus]) HSP 1 Score: 93.2 bits (230), Expect = 4.5e-16 Identity = 51/61 (83.61%), Postives = 54/61 (88.52%), Query Frame = 1
HSP 2 Score: 131.0 bits (328), Expect = 2.0e-27 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.154500 vs. NCBI nr
Match: gi|659089137|ref|XP_008445347.1| (PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Cucumis melo]) HSP 1 Score: 90.5 bits (223), Expect = 2.9e-15 Identity = 49/61 (80.33%), Postives = 53/61 (86.89%), Query Frame = 1
HSP 2 Score: 129.8 bits (325), Expect = 4.4e-27 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.154500 vs. NCBI nr
Match: gi|720016797|ref|XP_010261264.1| (PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Nelumbo nucifera]) HSP 1 Score: 80.5 bits (197), Expect = 3.0e-12 Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 1
HSP 2 Score: 129.4 bits (324), Expect = 5.7e-27 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.154500 vs. NCBI nr
Match: gi|255545672|ref|XP_002513896.1| (PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Ricinus communis]) HSP 1 Score: 85.1 bits (209), Expect = 1.2e-13 Identity = 42/48 (87.50%), Postives = 47/48 (97.92%), Query Frame = 1
HSP 2 Score: 129.4 bits (324), Expect = 5.7e-27 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |