Cucsa.152680 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGGGGTCCGTCTAGAGTGTTGGCTTATAGTGGTAAGCGTTGAGTTGGGTTGGTTTGTTACCTTGATCACACTTGTTTAACTTGATTTTATCTTTTAACAAAAAAAaTGAAGGTAGAAGAGGTTTTTGTTTGGTTTTACAATATGATTGAGACCTAGTCTCAAACTAAAATCCGCATTCTTCACTCTGATAATAGTACTGAATATTTTAACAAACAATTAACTTATTTTTTGCAAGATAAGGGTATTTTTCCATCAAGCTACATGTCAAGATACTCTTTAGCAAAATGACGTCGTTGAGCGAAAAAATAGATATTTACTTGAAGTTGCTTGTGCCCTTATGCTTTCTATGCATGTACCAAAATATTTGTGTGGTGATGCAGTCCTTACTGCTGCATACCTCATAAATCAAATGCCAACCAAGATTTTGAATTTTAAAACTCCTTTGAGTCGCTTCAAAACGGGTTTTTTCCTACTGTTAGATTGTTTTCTGACTTAACAATAAAAGTATTTGGGTGTATTGTTTATGTTCATATTCTTTACCCTATACTAACTAAACTTGATCCTTGAGCCGTTAAATACATTTCTGTATGCTATGTCTCCCATAAGAAGGCTTTCAAATGTTTTGACCCTTCAACCAAAAAGTTTTTGGAGAGTATGGACGTGCCTTTCTGTCTTCAAAGGGAGACATCTAACCTCGAAGATAATTTCTAGGACACTTCACTTACCCCAGACATCATTGGTCCTGAAATTATGAGTTATAATCCCTTGATGCCAAGTGTGGAAAGTTCTTCTTTAGGGAAGAAACACTACAAAAACCTGAACTTCAGATTTATACTAGAAAAACCTTGCCTCAAAGTAATTGAGAATAAACAGTTGATCTATCATAGGACCAATCTAATTCTTCGATGAATGATTCTGCAGATCTAGGTAACATACATCTCCTTCTCATAATTCTCCCAGTACTTCTCATAATTTTCCTAGTTCTCCTTACCCGATGTCTCTAATCTTGACATTCCAATTGCCCATAGGAAAATCACCCGTAAAGGTGCCAAATATCCCATTGCAAACTATCTTTCTTTATCACAGATTATCTAACAGTCATAAAGCCTTCACATCCAAAATAAACCACCTATTTGTTAGAAGGAATACACAGGAGGCCCTAAATGATTTGAATTGGAAAGTGGCAGTAATGGAAGAGATGAATGCACTGAAACAAAACTGCACATGGGACATAGTTGAACTACCTAAAAACAAGAAAACGGTTGGATGTAAGCGAGTGTTCACTGTATAATGTAAAGCTGATGGTAGTATTGAAAGGTACGAGGTCAGATTGGTTGCTAAGAAATTTACTCTGACCTATGGAGTTGATTATCAAGAAATATTTGCTCCAGTTGCTGAAATTAATTCCATAAGAATTTTGCTACATGTTGCAGTTAATTTTGATTGCCACTTTATCAACTGGATGTTAAGAATGACTTTCTCAATTGGATCATGAAGAAGAGGTATTTATACGTTTGCTACCTGGTTTTGAGGTGATCTCAGGATTAACAAAGTGTGAGTTAAAGTAATCATTATATGAGTCTCCTAGAGTCTGGTTTGAACGTTTTAAAAAAGCAGTCACAAGCTATGGATCTAGTCAAAGTCAAGTCAATCGTACTATGCTCTATAAACATACAGGAAATGACAAGGTTATGTTTTTGATAGTTTATGTTCATGATATCATTTTTGATGAGACATGACTTTCTTGAAGAAAAAGTTAGTTGATGATTTTCAAATCAGACACCTAGGAACTATGAAATATTAACCAGGCATGGAGTTTACTAGGTCCAGAAGTGGCATTCTTGTCAACCGAAGGAAGTATATTTTTTATCTACGGAAAGAAATAGGTTTACTTGGCTGTAGGGTGGTTGAAACTCCTATTAAGCAGAACTTGAAATTAGAAGTTGTTGAAAAAGAAATAAAAGAAAAAGAGAAGTATCAGAGATTTGTGGGGAGACTTACATATCTCGATCACACACGTCCTGACATCGCTTTCGCAGTGAATACTTAGTATGGGAAGTCAGTTCATGCATGCTCCTGGACCAGCTCACTTTGATGTTCACAGAATTCTAATATATTTGAAAAGTACTCTAGGAAAAGGCATATTGTTTTAAAAACATGACCACTAAATGTCGAAGTGTACACTGATACAGATTGGTTAGGTAGTACAACTGATAAAAGAGCCACTTCTGGTTATTGCTTTTGTTGGAGGAAATTTAGTTACTTGATGAAGCAAAAAATAGAGCATGGTTGCGAGTAGCGCAGAAGCAGAATTTAAAGCATCAACCCATGGTATTTGTAAGGGCATATGGATAAGAAGACTATTGGAAGAATTGAGATTCTCCCAGAAAATGCCTATGCTCATTTATTGTGATAACAAGGCAACAATTTCCATTGCCCACAGTCCAGTCCTTCATGATAGGACGGAACATAGTGAAGGTGATAAACACTTTATGAAGGAAAAGATTGTTCAAGGGATAATATGCATCCCTTATCTTTTGAGAACAAAACAAATCGCAAATGTGTTAACTAAAG ATGTGTGGGGTCCGTCTAGAGTGTTGGCTTATAGTGGTAAGCGTTGAGTTGGGTTGGTTTcaaaatgacgtcgttgagcgaaaaaatagatatttacttgaagttgcttgtgcccttatgctttctatgcatgtaccaaaatatttgtgtggtgatgcagtccttactgctgcatacctcataaatcaaatgccaaccaagattttgaattttaaaactcctttgagtcgcttcaaaacgggaaaatcacccgtaaaggtgccaaatatcccattgcaaactatctttctttatcacagattatctaacagtcataaagccttcacatccaaaataaaccacctatttgttagaaggaatacacaggaggccctaaatgatttgaattggaaagtggcagtaatggaagagatgaatgcactgaaacaaaactgcacatgggacatagttgaactacctaaaaacaagaaaacggttggatctgatggtagtattgaaaggtacgaggtcagattggttgctaagaaatttactctgacctatggagttgattatcaagaaatatttgctccagttgctgaaattaattccataagaattttgctacatgttgcacagtcacaagctatggatctagtcaaagtcaagtcaatcgtactatgctctataaacatacaggaaatgacaaggttatgcatggagtttactaggtccagaagtggcattcttgtcaaccgaaggaagtatattttttatctacggaaagaaataggtttacttggctgtagggtggttgaaactcctattaagcagaacttgaaattagaagttgttgaaaaagaaataaaagaaaaagagaagtatcagagatttgtggggagacttacatatctcgatcacacacgtcctgacatcgctttcgcaagcatggttgcgagtagcgcagaagcagaatttaaagcatcaacccatggtatttgtaagggcatatggataagaagactattggaagaattgagattctcccagaaaatgcctatgctcatttattgtgataacaaggcaacaatttccattgcccacagtccagtccttcatgataggacggaacatagtgaaggtgataaacactttatgaaggaaaagattgttcaagggataatatgcatcccttatcttttgagaacaaaacaaatcgcaaatgtgttaactaaag ATGTGTGGGGTCCGTCTAGAGTGTTGGCTTATAGTGGTAAGCGTTGAGTTGGGTTGGTTTCAAAATGACGTCGTTGAGCGAAAAAATAGATATTTACTTGAAGTTGCTTGTGCCCTTATGCTTTCTATGCATGTACCAAAATATTTGTGTGGTGATGCAGTCCTTACTGCTGCATACCTCATAAATCAAATGCCAACCAAGATTTTGAATTTTAAAACTCCTTTGAGTCGCTTCAAAACGGGAAAATCACCCGTAAAGGTGCCAAATATCCCATTGCAAACTATCTTTCTTTATCACAGATTATCTAACAGTCATAAAGCCTTCACATCCAAAATAAACCACCTATTTGTTAGAAGGAATACACAGGAGGCCCTAAATGATTTGAATTGGAAAGTGGCAGTAATGGAAGAGATGAATGCACTGAAACAAAACTGCACATGGGACATAGTTGAACTACCTAAAAACAAGAAAACGGTTGGATCTGATGGTAGTATTGAAAGGTACGAGGTCAGATTGGTTGCTAAGAAATTTACTCTGACCTATGGAGTTGATTATCAAGAAATATTTGCTCCAGTTGCTGAAATTAATTCCATAAGAATTTTGCTACATGTTGCACAGTCACAAGCTATGGATCTAGTCAAAGTCAAGTCAATCGTACTATGCTCTATAAACATACAGGAAATGACAAGGTTATGCATGGAGTTTACTAGGTCCAGAAGTGGCATTCTTGTCAACCGAAGGAAGTATATTTTTTATCTACGGAAAGAAATAGGTTTACTTGGCTGTAGGGTGGTTGAAACTCCTATTAAGCAGAACTTGAAATTAGAAGTTGTTGAAAAAGAAATAAAAGAAAAAGAGAAGTATCAGAGATTTGTGGGGAGACTTACATATCTCGATCACACACGTCCTGACATCGCTTTCGCAAGCATGGTTGCGAGTAGCGCAGAAGCAGAATTTAAAGCATCAACCCATGGTATTTGTAAGGGCATATGGATAAGAAGACTATTGGAAGAATTGAGATTCTCCCAGAAAATGCCTATGCTCATTTATTGTGATAACAAGGCAACAATTTCCATTGCCCACAGTCCAGTCCTTCATGATAGGACGGAACATAGTGAAGGTGATAAACACTTTATGAAGGAAAAGATTGTTCAAGGGATAATATGCATCCCTTATCTTTTGAGAACAAAACAAATCGCAAATGTGTTAACTAAAG MCGVRLECWLIVVSVELGWFQNDVVERKNRYLLEVACALMLSMHVPKYLCGDAVLTAAYLINQMPTKILNFKTPLSRFKTGKSPVKVPNIPLQTIFLYHRLSNSHKAFTSKINHLFVRRNTQEALNDLNWKVAVMEEMNALKQNCTWDIVELPKNKKTVGSDGSIERYEVRLVAKKFTLTYGVDYQEIFAPVAEINSIRILLHVAQSQAMDLVKVKSIVLCSINIQEMTRLCMEFTRSRSGILVNRRKYIFYLRKEIGLLGCRVVETPIKQNLKLEVVEKEIKEKEKYQRFVGRLTYLDHTRPDIAFASMVASSAEAEFKASTHGICKGIWIRRLLEELRFSQKMPMLIYCDNKATISIAHSPVLHDRTEHSEGDKHFMKEKIVQGIICIPYLLRTKQIANVLTKX
BLAST of Cucsa.152680 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 75.1 bits (183), Expect = 2.0e-12 Identity = 34/97 (35.05%), Postives = 58/97 (59.79%), Query Frame = 1
HSP 2 Score: 68.2 bits (165), Expect = 2.4e-10 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1
HSP 3 Score: 41.6 bits (96), Expect = 2.4e-02 Identity = 29/92 (31.52%), Postives = 47/92 (51.09%), Query Frame = 1
BLAST of Cucsa.152680 vs. Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.7e-09 Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 1
BLAST of Cucsa.152680 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 6.0e-09 Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 1
HSP 2 Score: 54.3 bits (129), Expect = 3.6e-06 Identity = 28/93 (30.11%), Postives = 56/93 (60.22%), Query Frame = 1
HSP 3 Score: 43.5 bits (101), Expect = 6.4e-03 Identity = 22/53 (41.51%), Postives = 32/53 (60.38%), Query Frame = 1
BLAST of Cucsa.152680 vs. TrEMBL
Match: W9RJF7_9ROSA (E3 ubiquitin-protein ligase listerin OS=Morus notabilis GN=L484_003308 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.2e-55 Identity = 135/292 (46.23%), Postives = 178/292 (60.96%), Query Frame = 1
BLAST of Cucsa.152680 vs. TrEMBL
Match: A5B0T2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018707 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 8.5e-55 Identity = 148/366 (40.44%), Postives = 211/366 (57.65%), Query Frame = 1
BLAST of Cucsa.152680 vs. TrEMBL
Match: A5C243_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019561 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.4e-52 Identity = 141/378 (37.30%), Postives = 195/378 (51.59%), Query Frame = 1
BLAST of Cucsa.152680 vs. TrEMBL
Match: A5C243_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019561 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 7.6e-11 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 1
HSP 2 Score: 201.1 bits (510), Expect = 2.7e-48 Identity = 119/282 (42.20%), Postives = 170/282 (60.28%), Query Frame = 1
BLAST of Cucsa.152680 vs. TrEMBL
Match: A0A151RBW0_CAJCA (Copia protein (Fragment) OS=Cajanus cajan GN=KK1_038711 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.5e-48 Identity = 124/306 (40.52%), Postives = 172/306 (56.21%), Query Frame = 1
BLAST of Cucsa.152680 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8) HSP 1 Score: 73.6 bits (179), Expect = 3.2e-13 Identity = 41/118 (34.75%), Postives = 66/118 (55.93%), Query Frame = 1
HSP 2 Score: 63.2 bits (152), Expect = 4.4e-10 Identity = 29/72 (40.28%), Postives = 45/72 (62.50%), Query Frame = 1
HSP 3 Score: 54.7 bits (130), Expect = 1.6e-07 Identity = 41/139 (29.50%), Postives = 65/139 (46.76%), Query Frame = 1
BLAST of Cucsa.152680 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)) HSP 1 Score: 64.7 bits (156), Expect = 1.5e-10 Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 1
BLAST of Cucsa.152680 vs. NCBI nr
Match: gi|703092620|ref|XP_010094679.1| (E3 ubiquitin-protein ligase listerin [Morus notabilis]) HSP 1 Score: 224.6 bits (571), Expect = 3.2e-55 Identity = 135/292 (46.23%), Postives = 178/292 (60.96%), Query Frame = 1
BLAST of Cucsa.152680 vs. NCBI nr
Match: gi|147777967|emb|CAN65132.1| (hypothetical protein VITISV_018707 [Vitis vinifera]) HSP 1 Score: 222.6 bits (566), Expect = 1.2e-54 Identity = 148/366 (40.44%), Postives = 211/366 (57.65%), Query Frame = 1
BLAST of Cucsa.152680 vs. NCBI nr
Match: gi|147782985|emb|CAN62019.1| (hypothetical protein VITISV_019561 [Vitis vinifera]) HSP 1 Score: 215.3 bits (547), Expect = 2.0e-52 Identity = 141/378 (37.30%), Postives = 195/378 (51.59%), Query Frame = 1
BLAST of Cucsa.152680 vs. NCBI nr
Match: gi|147782985|emb|CAN62019.1| (hypothetical protein VITISV_019561 [Vitis vinifera]) HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 1
HSP 2 Score: 201.1 bits (510), Expect = 3.8e-48 Identity = 119/282 (42.20%), Postives = 170/282 (60.28%), Query Frame = 1
BLAST of Cucsa.152680 vs. NCBI nr
Match: gi|1012328323|gb|KYP39973.1| (Copia protein, partial [Cajanus cajan]) HSP 1 Score: 200.7 bits (509), Expect = 5.0e-48 Identity = 124/306 (40.52%), Postives = 172/306 (56.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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