Cucsa.142500 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTATCCATCCTTCGCCATTTTGTAGAAAACACAAATAAATTTTCTTCTTCTTCTTTCTTTTCTTTTCACATCGCCACTTTTTCAAAACCCTCTCCCCTTTCCATTCTCCTTCCTACTTTTCCCTTCCCCCGACTATGGCCGAGCAGCTCACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGCCTCTTCGACAAGGACGGCGATGGTATCTTTTCTCAGATCTCTCTTCTTTTTTTTTTTTTCTTTTCCTATTATTTTTCATTTCAGATCTGGCTCTCTGTTTTTTTTGTTTTTCTGCTGTTTCCCCCCCCTTTGATCTAGGGTTTAGGTTCACTTTCAGGCTGTTATTATGTGCTTATGATGGGTTTTGTTGCTTCTATTTTATGTTTTCAGCTTTTGATTTAGATGTTTTTGTGCGGATTTTGTGATGTGGATTGGATCTGTTTTGATCTATGCTTTCTTTTGATTTGTTGACTTTATTCGTTTTGTTTTGGAGCTCTGTTTGGACAGCGATCTTGTAACTAATTGTTTTGGAAGGGTATTTTTGTGAAATGATTTGGCCTGGTGCATGGGTGATGATGTTTATGATTTCTTATTAGGTTTGCATGCGCGAGTTTTTTTTTCGTGGTAATTAAGATGTGTTTTTATGTTAATTGGATTTCTGGAATGAGAAAGAAGCGAATGTTTGTTTTTCCTTGTTGACTATGACGAGTTGATTTATTTTGCAACTTGTGTTGTTGTTGGTGGTGGTGAAACTGTTGAAAGTTTTATGGATTTGTCCTGGTTTGACTGCACGACTTGGTAGGCTAGAAATAAATGCCCATAGTTTATTTCAAGAATGAATTCCAACTGTTTGTTGAATAATGCAAATAATACATTTGATTCCATCTTTTTATAGCATGAGGAATTTCTGGCAAAGAGGAATGATGATTTTCTGTATGGTTTTGTTCTAAATTGTACAAGTTCGGTATCAGGATTTTGATCTATAAGAATCTTTTATTTTTTTCCTAGCAGATTGATGGGTTTTCCCTTTATTTGGGCTTTGACTTTAGTATGATTCATCCTCGCCAATCTCTAGAAAATCAATTTCTTATTTTCTTACAATTGACCACTTTCTCTTCTATGTTTTAAGGATTTTGTTCTTCCCCTTATATTGGCTTCTCTTTTTAGGAAATTATGATCTATATCCATGATTTATGATGATTTTATATTGGGATGCAGGCTGTATCACCACCAAGGAGCTTGGGACTGTGATGAGGTCACTTGGCCAAAATCCAACTGAAGCTGAATTGCAAGACATGATCAATGAAGTGGATGCTGACGGAAATGGAACCATCGACTTCCCAGAGTTCCTGAATCTGATGGCTAGGAAGATGAAAGACACTGATTCAGAGGAGGAACTGAAGGAAGCCTTCCGTGTGTTTGACAAGGACCAAAATGGTTTCATTTCTGCAGCTGAACTCCGCCACGTGATGACAAATCTCGGCGAGAAATTGACTGACGAAGAAGTAGATGAGATGATTCGTGAGGCTGACGTGGATGGCGATGGCCAGATTAACTACGAGGAATTCGTAAAAATCATGATGGCCAAGTGAGACAAAACCAAGCAAACACGAACAAGAACGCAACGAAAGCTAAGAAACCGAAAAAGGAGAGAGAGGATCCCTTTGTTAATGGGGCAATTCTATCTGTAGGAGAAACCCCTTCTTTTCTTTTGGGTGTTATTAGCTTTAGTTGTTGGTTCTTTCTGTTATCTTACTCTCTTTGTTTGCATAATTTATGGTACTGTATTTTCTGTTATTGGTTTGCTGTTTTTCATCTTCTCTTTTCTTCTTCTTGAGTAGATTTAGAGATAGTGGAGTCCTCCTTCTATTATCAATATTTGGTATTTTCTTTTCTCTTCTCTTTTTTGTGTTTCGCAATATCAATTTCAAGTACATTTCCAATGAATCCATTGGCCTTTTGGCTCCTCAACATCACTCATGAATGTTTTATTAATACTGCTGGAGATGGAGATTTCTTCCATTGTATTGTAATTTGTAATGCCTATGTTATTATTTCTTTTCGCTGCTGACTTTGCTTAATAAATCCATATTTCTTCACTTG CTATCCATCCTTCGCCATTTTGTAGAAAACACAAATAAATTTTCTTCTTCTTCTTTCTTTTCTTTTCACATCGCCACTTTTTCAAAACCCTCTCCCCTTTCCATTCTCCTTCCTACTTTTCCCTTCCCCCGACTATGGCCGAGCAGCTCACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGCCTCTTCGACAAGGACGGCGATGGCTGTATCACCACCAAGGAGCTTGGGACTGTGATGAGGTCACTTGGCCAAAATCCAACTGAAGCTGAATTGCAAGACATGATCAATGAAGTGGATGCTGACGGAAATGGAACCATCGACTTCCCAGAGTTCCTGAATCTGATGGCTAGGAAGATGAAAGACACTGATTCAGAGGAGGAACTGAAGGAAGCCTTCCGTGTGTTTGACAAGGACCAAAATGGTTTCATTTCTGCAGCTGAACTCCGCCACGTGATGACAAATCTCGGCGAGAAATTGACTGACGAAGAAGTAGATGAGATGATTCGTGAGGCTGACGTGGATGGCGATGGCCAGATTAACTACGAGGAATTCGTAAAAATCATGATGGCCAAGTGAGACAAAACCAAGCAAACACGAACAAGAACGCAACGAAAGCTAAGAAACCGAAAAAGGAGAGAGAGGATCCCTTTGTTAATGGGGCAATTCTATCTGTAGGAGAAACCCCTTCTTTTCTTTTGGGTGTTATTAGCTTTAGTTGTTGGTTCTTTCTGTTATCTTACTCTCTTTGTTTGCATAATTTATGGTACTGTATTTTCTGTTATTGGTTTGCTGTTTTTCATCTTCTCTTTTCTTCTTCTTGAGTAGATTTAGAGATAGTGGAGTCCTCCTTCTATTATCAATATTTGGTATTTTCTTTTCTCTTCTCTTTTTTGTGTTTCGCAATATCAATTTCAAGTACATTTCCAATGAATCCATTGGCCTTTTGGCTCCTCAACATCACTCATGAATGTTTTATTAATACTGCTGGAGATGGAGATTTCTTCCATTGTATTGTAATTTGTAATGCCTATGTTATTATTTCTTTTCGCTGCTGACTTTGCTTAATAAATCCATATTTCTTCACTTG ATGGCCGAGCAGCTCACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGCCTCTTCGACAAGGACGGCGATGGCTGTATCACCACCAAGGAGCTTGGGACTGTGATGAGGTCACTTGGCCAAAATCCAACTGAAGCTGAATTGCAAGACATGATCAATGAAGTGGATGCTGACGGAAATGGAACCATCGACTTCCCAGAGTTCCTGAATCTGATGGCTAGGAAGATGAAAGACACTGATTCAGAGGAGGAACTGAAGGAAGCCTTCCGTGTGTTTGACAAGGACCAAAATGGTTTCATTTCTGCAGCTGAACTCCGCCACGTGATGACAAATCTCGGCGAGAAATTGACTGACGAAGAAGTAGATGAGATGATTCGTGAGGCTGACGTGGATGGCGATGGCCAGATTAACTACGAGGAATTCGTAAAAATCATGATGGCCAAGTGA MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKIMMAK*
BLAST of Cucsa.142500 vs. Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4) HSP 1 Score: 296.2 bits (757), Expect = 2.0e-79 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2) HSP 1 Score: 296.2 bits (757), Expect = 2.0e-79 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2) HSP 1 Score: 296.2 bits (757), Expect = 2.0e-79 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. Swiss-Prot
Match: CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=1 SV=2) HSP 1 Score: 296.2 bits (757), Expect = 2.0e-79 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. Swiss-Prot
Match: CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2) HSP 1 Score: 296.2 bits (757), Expect = 2.0e-79 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. TrEMBL
Match: A0A0A0M2G5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600260 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 7.7e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. TrEMBL
Match: A0A103YFF4_CYNCS (Calcium-binding EF-hand OS=Cynara cardunculus var. scolymus GN=Ccrd_013528 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 1.7e-77 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. TrEMBL
Match: M0S453_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 1.7e-77 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. TrEMBL
Match: M0RE63_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 1.7e-77 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. TrEMBL
Match: G3MHB1_9ACAR (Uncharacterized protein (Fragment) OS=Amblyomma maculatum PE=2 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 2.2e-77 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. TAIR10
Match: AT3G43810.1 (AT3G43810.1 calmodulin 7) HSP 1 Score: 296.2 bits (757), Expect = 1.1e-80 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. TAIR10
Match: AT2G27030.3 (AT2G27030.3 calmodulin 5) HSP 1 Score: 295.0 bits (754), Expect = 2.5e-80 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1
HSP 2 Score: 69.3 bits (168), Expect = 2.3e-12 Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. TAIR10
Match: AT3G56800.1 (AT3G56800.1 calmodulin 3) HSP 1 Score: 295.0 bits (754), Expect = 2.5e-80 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. TAIR10
Match: AT5G21274.1 (AT5G21274.1 calmodulin 6) HSP 1 Score: 294.7 bits (753), Expect = 3.3e-80 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. TAIR10
Match: AT2G41110.2 (AT2G41110.2 calmodulin 2) HSP 1 Score: 286.2 bits (731), Expect = 1.2e-77 Identity = 146/161 (90.68%), Postives = 149/161 (92.55%), Query Frame = 1
BLAST of Cucsa.142500 vs. NCBI nr
Match: gi|449452704|ref|XP_004144099.1| (PREDICTED: calmodulin-7-like [Cucumis sativus]) HSP 1 Score: 297.7 bits (761), Expect = 1.1e-77 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. NCBI nr
Match: gi|695002524|ref|XP_009380569.1| (PREDICTED: calmodulin-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 296.6 bits (758), Expect = 2.5e-77 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. NCBI nr
Match: gi|729298752|ref|XP_010551920.1| (PREDICTED: calmodulin-7-like [Tarenaya hassleriana]) HSP 1 Score: 296.6 bits (758), Expect = 2.5e-77 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. NCBI nr
Match: gi|695062437|ref|XP_009419686.1| (PREDICTED: calmodulin-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 296.6 bits (758), Expect = 2.5e-77 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.142500 vs. NCBI nr
Match: gi|34304715|gb|AAQ63461.1| (calmodulin 4 [Daucus carota]) HSP 1 Score: 296.2 bits (757), Expect = 3.2e-77 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |