Cucsa.067660 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAAAGAACTTTTGCCATTTTATGTCACTTACTAAGAACAAGGGCTGGTCTGACGTCGATAGAATGCATCGATGTGGAGGAGATGGTCGCGATGTTTCTACATATACTAGCGCACGATGTGAAAAATAGAGTCATTCAATGAGACTTTGTGCGGTACAGGGAGACAGTTTCTCACCATTTCAACCTATGTTGTTAGCTATGATACAACTACACGATGAGTTGCTGAAGAAACCACAGCCAGTAACAAACACTTGCACCAATCCACGATGGAGGTGCTTCGATGTTTGACTAGTCTTCTAATCCATTCTGATAAGGTATCCCGAGGTCATAGTACTTAGCTGCATTTTTTTTCAATTAAGCTGAATTGTTTCGGGGCATTGGATGAGACTTACATCAAGGTGAACGTGCCCATTTTTTATCATCCCAGGTATAGAACATGTAAGGGCGAAGTTGCCACGAACGTGCTCGACGTTTGAGGCACGAAAGGCGACTTCGTATCATGTTGGTTGGCTGGGAAGGATCGGCAGCAGATTCTTGCATACTCCGTGATGCTATATCACGACCCAACAAACTGCAAGTTCTGAAGGGTAAGTGGTGTTCGTTCTCATACTACATCAAATCTAGGGATTTACATATAGTCAAATTAAGTAATGTCGTTATCGTGACAGGGTTTTACTATCTATGCGACGCGGGGTATCCTAACGTCGAAGGATTTCTTGCTCCATACAGAGGACAAAGATACCACTTGCAAGAGTGGCAATGATCTGGTAATGCGCCAAGTAATGCGAAAGAGTACTTCAACATAAAACATTCGTCAGCACAGAATGTTATTGAGCGAGCATTTGGGTTGTTGAAGGGTCGTTGGGCAATCCTACGTGGAAAGTCGTACTATCCCGTGCAGGTTCAGTGTTGTACGATTTTGGCATGTTGCCTTCTACACAATCTCATAAATTGA atggacaaaagaacttttgccattttatgtcacttactaagaacaagggctggtctgacgtcgatagaatgcatcgatgtggaggagatggtcgcgatgtttctacatatactagcgcacgatgtgaaaaatagaggagacagtttctcaccatttcaacctatgttgttagctatgatacaactacacgatgagttgctgaagaaaccacagccactgcattttttttcaattaagctgaattgtttcggggcattggatgagacttacatcaaggtgaacgtgcccattttttatcatcccaggcacgaaaggcgacttcgtatcatgttggttggctgggaaggatcggcagcagattcttgcatactccgtgatgctatatcacgacccaacaaactgcaagttctgaaggagtacttcaacataaaacattcgtcagcacagaatgttattgagcgagcatttgggttgttgaagggtcgttgggcaatcctacgtggaaagtcgtactatcccgtgcaggttcagtgttgtacgattttggcatgttgccttctacacaatctcataaattga ATGGACAAAAGAACTTTTGCCATTTTATGTCACTTACTAAGAACAAGGGCTGGTCTGACGTCGATAGAATGCATCGATGTGGAGGAGATGGTCGCGATGTTTCTACATATACTAGCGCACGATGTGAAAAATAGAGGAGACAGTTTCTCACCATTTCAACCTATGTTGTTAGCTATGATACAACTACACGATGAGTTGCTGAAGAAACCACAGCCACTGCATTTTTTTTCAATTAAGCTGAATTGTTTCGGGGCATTGGATGAGACTTACATCAAGGTGAACGTGCCCATTTTTTATCATCCCAGGCACGAAAGGCGACTTCGTATCATGTTGGTTGGCTGGGAAGGATCGGCAGCAGATTCTTGCATACTCCGTGATGCTATATCACGACCCAACAAACTGCAAGTTCTGAAGGAGTACTTCAACATAAAACATTCGTCAGCACAGAATGTTATTGAGCGAGCATTTGGGTTGTTGAAGGGTCGTTGGGCAATCCTACGTGGAAAGTCGTACTATCCCGTGCAGGTTCAGTGTTGTACGATTTTGGCATGTTGCCTTCTACACAATCTCATAAATTGA MDKRTFAILCHLLRTRAGLTSIECIDVEEMVAMFLHILAHDVKNRGDSFSPFQPMLLAMIQLHDELLKKPQPLHFFSIKLNCFGALDETYIKVNVPIFYHPRHERRLRIMLVGWEGSAADSCILRDAISRPNKLQVLKEYFNIKHSSAQNVIERAFGLLKGRWAILRGKSYYPVQVQCCTILACCLLHNLIN*
BLAST of Cucsa.067660 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 3.3e-41 Identity = 118/267 (44.19%), Postives = 141/267 (52.81%), Query Frame = 1
BLAST of Cucsa.067660 vs. TrEMBL
Match: A2ZTW0_ORYSJ (Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_02038 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 8.2e-32 Identity = 90/224 (40.18%), Postives = 126/224 (56.25%), Query Frame = 1
BLAST of Cucsa.067660 vs. TrEMBL
Match: K4BJ65_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 5.0e-29 Identity = 93/234 (39.74%), Postives = 121/234 (51.71%), Query Frame = 1
BLAST of Cucsa.067660 vs. TrEMBL
Match: A5BND9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027369 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 6.5e-29 Identity = 98/264 (37.12%), Postives = 127/264 (48.11%), Query Frame = 1
BLAST of Cucsa.067660 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27 Identity = 88/194 (45.36%), Postives = 111/194 (57.22%), Query Frame = 1
BLAST of Cucsa.067660 vs. TAIR10
Match: AT5G41980.1 (AT5G41980.1 Putative harbinger transposase-derived nuclease (InterPro:IPR006912)) HSP 1 Score: 78.6 bits (192), Expect = 4.8e-15 Identity = 71/259 (27.41%), Postives = 107/259 (41.31%), Query Frame = 1
BLAST of Cucsa.067660 vs. TAIR10
Match: AT5G35695.1 (AT5G35695.1 Putative harbinger transposase-derived nuclease (InterPro:IPR006912)) HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06 Identity = 22/53 (41.51%), Postives = 32/53 (60.38%), Query Frame = 1
BLAST of Cucsa.067660 vs. TAIR10
Match: AT5G12010.1 (AT5G12010.1 unknown protein) HSP 1 Score: 48.1 bits (113), Expect = 6.9e-06 Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 1
BLAST of Cucsa.067660 vs. NCBI nr
Match: gi|659086609|ref|XP_008444024.1| (PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo]) HSP 1 Score: 223.4 bits (568), Expect = 3.4e-55 Identity = 130/238 (54.62%), Postives = 151/238 (63.45%), Query Frame = 1
BLAST of Cucsa.067660 vs. NCBI nr
Match: gi|659082639|ref|XP_008441953.1| (PREDICTED: uncharacterized protein LOC103485952 [Cucumis melo]) HSP 1 Score: 209.5 bits (532), Expect = 5.1e-51 Identity = 122/210 (58.10%), Postives = 137/210 (65.24%), Query Frame = 1
BLAST of Cucsa.067660 vs. NCBI nr
Match: gi|659111563|ref|XP_008455792.1| (PREDICTED: putative nuclease HARBI1 [Cucumis melo]) HSP 1 Score: 184.9 bits (468), Expect = 1.3e-43 Identity = 126/269 (46.84%), Postives = 141/269 (52.42%), Query Frame = 1
BLAST of Cucsa.067660 vs. NCBI nr
Match: gi|659133321|ref|XP_008466673.1| (PREDICTED: uncharacterized protein LOC103504027 [Cucumis melo]) HSP 1 Score: 183.0 bits (463), Expect = 5.1e-43 Identity = 114/218 (52.29%), Postives = 130/218 (59.63%), Query Frame = 1
BLAST of Cucsa.067660 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 176.4 bits (446), Expect = 4.8e-41 Identity = 118/267 (44.19%), Postives = 141/267 (52.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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