Cucsa.055370 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAACATAATTCCATGCTTTCGTTGGACCAAAAATCCAAGCTTGAAATGTTATCTTTCCATGCTCCTAAGATCAGACTACTTCGCAGTTTGAATATCGAAAGTGAAACAGTGCAGGTTTTATTTTCTATTTCAACCCTCTTAGGGATAATTTTTATGCTTTAGTTCATATAATATGATTGGAAAATGAAACTTAAGAGAATTTGAGCTGTACTAGGTAAATTGTAAAGTGATTTGACAGAGAAAAAATTGGAGGAGACTCTAGTGACCACTTCCATCTTTTTCGAGAAGGGAAACAAATTCCATTGATGATTGAAACAAAATGAATAAACCCCAAAACATCTATAGGTGGATTACATGAAAATTTTCTGATTGAAAATCAGATACAAGAGACTATAATCAGAAAAGAAAGAAGTTATATTACATTGATGAATAAAATAAAATGGAAAATATTGTACTACTTTGACGGTTGCCCACAAAATTACATGATCATCGTTTCTATCTGTTTATGAAACTGTGGAGAAAAATCAAATTTTATAATGTGAGATTAAAGGTATTTCAGTAACTTCAGAAAGGTCATTCTCTCATCACCATTATTGTCATCATAATGCCCACACAAAAAAAAAGTATTAATATTCAAACTTATTAGACCACAAGAAATAACTTACCAAACTCTGTTGGGTGTTCAAAGAATAAAAGAAAAAATTCTGTAATTATAGCCTATTAACAGTTATTTTAAATTCTAAAGCTCTTGTTTTGCAGCTTTTAGGCAAGTAATTGTGCAAGACAAGATGTTTGTCACCCCTAGCCTGTGATATTCTTATTTCGTTTATTTCTTATTCATAGTTGTCATTTTTTTTTAATAACAAACAGAAAGTAATTCGTAGTTTTGATTAGTTCTCTTGCCCTTTTTGCTTGTAGCCTTCTTGATTGTTCCTTGATGAAATCCCTGCTTCCCCTCAAATTTAAAATTTGAAAATGTTAAATGAAGAACCATCCCTTGAGAAAGCCTTCCTTGGAACTCTAAACTCTAAAGTACAGAAATTTGATAGTTATCCCAAGATAGTCCTTGTACTTTGTTGATGATGAGAGAGTTAGTCTCAGTCATGGACTAAAAAGTCCTTTGGTTATGGCTATGATGGGAATATGATCCATGTGGCTAATCACTGTAGATACTCGCTGCAAGAATTAGTATCAATGATTTTGAGGTTTCTGAATTACTTGAGTCAGCTCTAAACAAATTTCTAAATTGCAGTTTCTGTAGCTAGCCCAACCGTAAATCTTATTTTTCCCTTTTGCTACTATTTACGCTTTCAAAATAGCCCTAAACTGCTGAAATTCACTCTAGAATCTGTGTGTTTGGTAACCATACTTAGCATCTATATTTATATTCAAATAACTATTTCCCTTCAATTATGGTGCAGGTTTTAGATTTTGCTGCATTCCCTGAACCAGAATTTGATATTCCCATTTTTTGCGCAAATATTTTCACTGCTGCAAATTCAAGTATAGTAGTACTGTAAGCTTCTTTGTACTTTGGAGCCTGATACCAGATACTAAATTGTAGAACAAATAGCCTTTCATCATTCATATGAGCTTCAATGTTTCAAATTCTTTGTAAACTTTTGCATCTTCTACCATGGAACCATTTGAACTACTAAAATTCGATGTTCTTAATATGAGAACCCCAATGAATCAATCTAAAAATCCATTGGTTATGTGAATGCCTTGCCTCCTGTTAACAATGATATCTGAAAAGTCAATTTAGTTCAAATCAAAGGATGGAGGTAGATGCAGATCATTGACTCTAGATCAAAACCTAGAAGAAAGAACCTGAATCTTGTGGGAAGGGGTCATATCTATTGTAGTTTTCCCAATTTCTCTCAGTTTGTTTGTTGGTTGCTGTGTTAGGGAAGGCTCAAAAGAAATAGGTGGGAGATAAGCCATTGTCTGTTTTATTTCCGTATTTATACTTTCTTTCGAAGCAGCTCTGCCTATAGTGGCCTATTCCCAAGACCATTCTTTGATTTTATTAGGTTTTAGTCATCCTAAGTTTGATAGTGAGGATTGATATGGCGGGTCTTCTTGGAGGGTTAAAATTCCAAAGAGTGTAAAGAGTATTTCATGGGAGGTTTAATACCATTGATTGTATTTAAAAAAAACACCCTTCCTTTGTTTTGTATATGCAAGGGTTTAAGAGGCACTAGGTGGATCTTAATCATTTACTAGTTTGTAGACTACCTTGAAGCTGCTTGTTGAGTTTTTTCATTCTGTGGGGTTCGCAATAGTGATGGGCTGTCTATATTGGAGAAGTTGCTTTTGATCCTCCCTAAGTAGAGGGGCAAAGTTTTGTGGCATGGCAACTTCTTTGATGTCTTGTTTTATCTATGAAATGTTAACTTCTGAATCTTTACTGTTTCGTGGGTTATTTGGCTTTGAGAACAGTAAGATTTTCTGGAAAGGTCGTGAAATCAGGTGAGGAGTTTTGGGAGGTGGAAATGTTAAATACTTATTTGTGGATGTCAATCACTTGGCCTTTTTGTAGTTATAGGGCCATACTGCCATCTTCTTGGGGCTTGTTTTTTATACGTCGTCATTTTATTCTATCATTCTTCTCAATAAAAGCTTTGTTTCGTTATCAAAAAATGTTTGATGCTCAATCAATCGTTAGTGTTCCTAAAGCATGTCATCTAATCAGTAGATCGTAAACGTACGCCTCTACACTTTTTTCGACATACATTAAGTTACATAGATAAGAGAATGTGGGTATCTTGTCTTCTGATTTAGTGAGCTTTCTCCAGTTTTTGTTGGTAGGCACTTGTTGGAAACTTAAGTTAGAGATAAATGTCAACTAAAATGACCAGAATAGTTTCCATAAGTACTTTTTTAGCAATCTCAATCACATACCTGGAGGGAGAAAGATGTTGATTTGGAGTGATATGAGTTTGGCTCATTGATGCATCTAGAGTTGGGGTTTTAAAGCAGACACCTAATCGTGCACCATATACTTCTTATTCCGAGTGTCCAAATTATATGCTAAAATATCTCTAACGAGATTACCAATTAATGTTCTTTTTCTTGCTGGAACTTACACTAAGTATAATTTGCATCCATTCATAACACCAACTCGTATTTCTTTTGTAGGGATCTCAACCCTTTGCATGATGTGATCTCCCAAAGATATTATAGAGAAAAGTACTATAAGAGCTTATTACATCTTGGAACTAAATATGCTGAGGTGAATGTCTATTTTCAAGATATTAGTCATATTACTATTTACTAACTTCTACTGGCACTCTAGAATTTTTACTTTTATCACATTTTTCATACAACTTTTTTTCCTTTTCCTAAGTCTTCTAAATTTGATGTGATGATTACTGAAAACAGACTTCCTGCAGCTCTTACCCTGGGGCGGAAAGCTTACAAGCGAGTCATTGAAATTTTTCTCTCCCATTGTGATATGGTCCAAGTTTTCATCAACTGAGTCCAAGTATGATATATTGTTTTCTGCATTCATGGATTACTACAAGGTAGTTGAAATTAACTATGCTTCTACTACGATAAAGATTTTTTTTTCTTTTTTTTCTTTTTTTGCATTTTCTTGTGTGATTTCTTGCTTTGTATTTTTGAAGTATTTTAGTTATATAGATTGGATCTTATTTTGATTATGTTACTGAAAGTTTCAATTTACTGCTAGGCATGGCTTGAGCTCATGAACAATACTGGGGAGGAAACTATCCCGCCTCAACTTATGGTTAATCGAGAAGCGCAACACAGATACCTGTCGTGGAGGGCAGAAAAGGTCATTAACATTAGTTTCATATCATAGATCTCTTCTTCTTTCCTTATATGTTTTGTTTTATGAAAATTTCTGACTTAGCTCTAGCGCAAAGACGTGCTGGTTGTATATGGATGGATTTTACCAACACTTAGCTAGATAATTGCTCACAGTTAACTTTGGTTATATATTCAAATGTAAACCAGAAAGAACATTTAGGAGTCTACTAAATTGGTTTTCATTATACCACTGAAATAAAACTTAATCCCGACTATAAAGTTTCATGAAAACTTTCTCTTTTGTTAAAATGTCTGGGCCTTTATTCGATGCAACATTGGCAAAACAGGATCCAGGACACCATCTTCTAAGAAAACTAATTGGAGAGACGCTTGCAAAGGTAACACACATGAAACCTGTAAATTTTCTTGCATCGTTTGAAAAATCTTCATTCTCTCACTTTGCATCTAACCGTTAGGATGTGGTGAGAAATTTCCTGTTCCATGGCGTCGACGAGCTTGGAAGCAAAAAGTTTCTAGATTACTTTCCAGAGTATTGCTGCGAAGATGGTACAATCAACACGAAACGCAGTATGGCAGGAAAGTCTTACGAACATCGACCTTGGGATGAAAGAGGTGAATTTATTGGAGATACTATCAAAAGCTGA GAAAAACATAATTCCATGCTTTCGTTGGACCAAAAATCCAAGCTTGAAATGTTATCTTTCCATGCTCCTAAGATCAGACTACTTCGCAGTTTGAATATCGAAAGTGAAACAGTGCAGGTTTTAGATTTTGCTGCATTCCCTGAACCAGAATTTGATATTCCCATTTTTTGCGCAAATATTTTCACTGCTGCAAATTCAAGTATAGTAGTACTGGATCTCAACCCTTTGCATGATGTGATCTCCCAAAGATATTATAGAGAAAAGTACTATAAGAGCTTATTACATCTTGGAACTAAATATGCTGAGCTCTTACCCTGGGGCGGAAAGCTTACAAGCGAGTCATTGAAATTTTTCTCTCCCATTGTGATATGGTCCAAGTTTTCATCAACTGAGTCCAAGTATGATATATTGTTTTCTGCATTCATGGATTACTACAAGGCATGGCTTGAGCTCATGAACAATACTGGGGAGGAAACTATCCCGCCTCAACTTATGGTTAATCGAGAAGCGCAACACAGATACCTGTCGTGGAGGGCAGAAAAGGATCCAGGACACCATCTTCTAAGAAAACTAATTGGAGAGACGCTTGCAAAGGATGTGGTGAGAAATTTCCTGTTCCATGGCGTCGACGAGCTTGGAAGCAAAAAGTTTCTAGATTACTTTCCAGAGTATTGCTGCGAAGATGGTACAATCAACACGAAACGCAGTATGGCAGGAAAGTCTTACGAACATCGACCTTGGGATGAAAGAGGTGAATTTATTGGAGATACTATCAAAAGCTGA ATGCTTTCGTTGGACCAAAAATCCAAGCTTGAAATGTTATCTTTCCATGCTCCTAAGATCAGACTACTTCGCAGTTTGAATATCGAAAGTGAAACAGTGCAGGTTTTAGATTTTGCTGCATTCCCTGAACCAGAATTTGATATTCCCATTTTTTGCGCAAATATTTTCACTGCTGCAAATTCAAGTATAGTAGTACTGGATCTCAACCCTTTGCATGATGTGATCTCCCAAAGATATTATAGAGAAAAGTACTATAAGAGCTTATTACATCTTGGAACTAAATATGCTGAGCTCTTACCCTGGGGCGGAAAGCTTACAAGCGAGTCATTGAAATTTTTCTCTCCCATTGTGATATGGTCCAAGTTTTCATCAACTGAGTCCAAGTATGATATATTGTTTTCTGCATTCATGGATTACTACAAGGCATGGCTTGAGCTCATGAACAATACTGGGGAGGAAACTATCCCGCCTCAACTTATGGTTAATCGAGAAGCGCAACACAGATACCTGTCGTGGAGGGCAGAAAAGGATCCAGGACACCATCTTCTAAGAAAACTAATTGGAGAGACGCTTGCAAAGGATGTGGTGAGAAATTTCCTGTTCCATGGCGTCGACGAGCTTGGAAGCAAAAAGTTTCTAGATTACTTTCCAGAGTATTGCTGCGAAGATGGTACAATCAACACGAAACGCAGTATGGCAGGAAAGTCTTACGAACATCGACCTTGGGATGAAAGAGGTGAATTTATTGGAGATACTATCAAAAGCTGA MLSLDQKSKLEMLSFHAPKIRLLRSLNIESETVQVLDFAAFPEPEFDIPIFCANIFTAANSSIVVLDLNPLHDVISQRYYREKYYKSLLHLGTKYAELLPWGGKLTSESLKFFSPIVIWSKFSSTESKYDILFSAFMDYYKAWLELMNNTGEETIPPQLMVNREAQHRYLSWRAEKDPGHHLLRKLIGETLAKDVVRNFLFHGVDELGSKKFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDERGEFIGDTIKS*
BLAST of Cucsa.055370 vs. Swiss-Prot
Match: PFBS_ARATH (Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thaliana GN=HY2 PE=2 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 1.6e-89 Identity = 151/250 (60.40%), Postives = 198/250 (79.20%), Query Frame = 1
BLAST of Cucsa.055370 vs. Swiss-Prot
Match: PEBB_TRIEI (Phycoerythrobilin:ferredoxin oxidoreductase OS=Trichodesmium erythraeum (strain IMS101) GN=pebB PE=3 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.6e-26 Identity = 63/186 (33.87%), Postives = 103/186 (55.38%), Query Frame = 1
BLAST of Cucsa.055370 vs. Swiss-Prot
Match: PEBB_NOSP7 (Phycoerythrobilin:ferredoxin oxidoreductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pebB PE=3 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.4e-24 Identity = 60/189 (31.75%), Postives = 102/189 (53.97%), Query Frame = 1
BLAST of Cucsa.055370 vs. Swiss-Prot
Match: PEBB_GLOVI (Phycoerythrobilin:ferredoxin oxidoreductase OS=Gloeobacter violaceus (strain PCC 7421) GN=pebB PE=3 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 4.1e-24 Identity = 60/189 (31.75%), Postives = 100/189 (52.91%), Query Frame = 1
BLAST of Cucsa.055370 vs. Swiss-Prot
Match: PEBB_PROMM (Phycoerythrobilin:ferredoxin oxidoreductase OS=Prochlorococcus marinus (strain MIT 9313) GN=pebB PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.3e-17 Identity = 56/188 (29.79%), Postives = 96/188 (51.06%), Query Frame = 1
BLAST of Cucsa.055370 vs. TrEMBL
Match: A0A0A0LXG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G616870 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 1.5e-145 Identity = 254/255 (99.61%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of Cucsa.055370 vs. TrEMBL
Match: M5WHM5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008498mg PE=4 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 3.2e-108 Identity = 187/254 (73.62%), Postives = 223/254 (87.80%), Query Frame = 1
BLAST of Cucsa.055370 vs. TrEMBL
Match: A0A067E118_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0199442mg PE=4 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 1.5e-105 Identity = 177/254 (69.69%), Postives = 222/254 (87.40%), Query Frame = 1
BLAST of Cucsa.055370 vs. TrEMBL
Match: A0A0D2VIH4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G252400 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 9.7e-105 Identity = 179/255 (70.20%), Postives = 219/255 (85.88%), Query Frame = 1
BLAST of Cucsa.055370 vs. TrEMBL
Match: A0A0D2W9D9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G252400 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 9.7e-105 Identity = 179/255 (70.20%), Postives = 219/255 (85.88%), Query Frame = 1
BLAST of Cucsa.055370 vs. TAIR10
Match: AT3G09150.2 (AT3G09150.2 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)) HSP 1 Score: 330.5 bits (846), Expect = 9.3e-91 Identity = 151/250 (60.40%), Postives = 198/250 (79.20%), Query Frame = 1
BLAST of Cucsa.055370 vs. NCBI nr
Match: gi|449442567|ref|XP_004139053.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis sativus]) HSP 1 Score: 523.5 bits (1347), Expect = 2.1e-145 Identity = 254/255 (99.61%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of Cucsa.055370 vs. NCBI nr
Match: gi|659098972|ref|XP_008450371.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis melo]) HSP 1 Score: 501.1 bits (1289), Expect = 1.1e-138 Identity = 244/255 (95.69%), Postives = 250/255 (98.04%), Query Frame = 1
BLAST of Cucsa.055370 vs. NCBI nr
Match: gi|595863411|ref|XP_007211577.1| (hypothetical protein PRUPE_ppa008498mg [Prunus persica]) HSP 1 Score: 399.4 bits (1025), Expect = 4.6e-108 Identity = 187/254 (73.62%), Postives = 223/254 (87.80%), Query Frame = 1
BLAST of Cucsa.055370 vs. NCBI nr
Match: gi|645241793|ref|XP_008227246.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Prunus mume]) HSP 1 Score: 398.3 bits (1022), Expect = 1.0e-107 Identity = 185/254 (72.83%), Postives = 222/254 (87.40%), Query Frame = 1
BLAST of Cucsa.055370 vs. NCBI nr
Match: gi|568833045|ref|XP_006470728.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic isoform X1 [Citrus sinensis]) HSP 1 Score: 395.2 bits (1014), Expect = 8.7e-107 Identity = 179/254 (70.47%), Postives = 224/254 (88.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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