Cucsa.036070 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AATGGACAGACGAACTTTTTCCATTCTATGTCACTTACTAAGGACGATTGTTGGTCTGATGTCGACCGAAATCGTCGATGTCAAGGAGATGGTCGCCATGTTTCTGCATGTATTGGCACATGATGTCAAGAATAGAATCATCCAACGGGATTTCGTGCGATCAGGAGAGACTGTTTTCCGTCACTTTAACCTCGTACTACTGGCGGTGTTGCGATTGCACGATGAGTTGTTGAAGAAACCCCAGCCAGTGACTAACACACGCACTGATTCAAGATGGAGTTGCTTCGAGGTCCGCATATTACTATATCCCGTTACTTATCAATCACCACGTCCAGTGACTAACTGGGTGGTATTTCATTCTGCAGAACTACCTTGGGGCATTGGATGACACGTACATCAAGGTGAACGTGCCGCAAACCGATAGGCTTAGGTATAGAACACGTAAGGGAGAAGTTGCCACAAACGTCCTCGGTGTGTGTGATATGAAAGGCGACTTCATCTTCGTATTGGCTGGTTGGAAAGGATCTGCAGCAGATTCACGCATTCTTCGAGATGCTATTGCACAACCAAATGGACTGCATGTTCCTCAAGATAATCAAATGTTTTATGCCTCGAACATATACTTCCTACAACGTCAAGCAAATTAGTTCAATCTGACGCATTCATAACAGGTCATTACTATCTATGCGACGCCAGATATCCCAATGCAGAGGGATTTCTAGCTCCCTATAGAGGACAAAGATACCACTTGCAAGAGTGGCGAGGAGCGGGAAATGCCCCTGCCACCGCGAAAGAGTACTTCAACATGAAACATTCTACCGCTAGGAATGTTATTGAACGAGCGTTCGAGTTGTTGAAGGGTCGATGGACAATCCTTCCTGGCAAGTCGTACTATCCCGTGCAAATTCAATGTCGAACAATTCTAGCGTGTTGCCCACTACACAATCTCATCAACCACGAGATGACGAATGTCAATTTCGTTGATGAAGGAGACTCCACCTACGCCACGATTGGAGGTGATGACATTCAGTTCGTTGAGAACTCAAATGAATGGACGCAGTGGAGGGATGATTTGGCCGCAGAGATGTTCAATGAATGGCAGTTTCGTAACGAATAGGCTTTCGTGTCGATTTCGTATTCCTGTACTTGTATTTAGTTAGTATTGGGTGTGTCTTCCTGTACGCTTGAATGTATGCATGCAGTATGAAAAACGAATTTGAGAATTTTGCCTTCTTGTGTATTTTAATAATTATTCCTTCTTGTTTATTGAAGGTACTTAAACAAATGCATGGTTGTATGATTGTCAGTATGGCAAGTTCATCACGTGCTTCTAAGTATGTATGGATGAAGGAGGAGGAGGCAACCCTCGTCGCGTGTATGGTCGAGTTGGTGTCTGCTGATGGATCGAAGTCAGACAATGGCACAACTTCTACGAATGATGGCCGCGAAGTTGCCGGGATGCAATGTACATGCGACCACAGTGATCGACTGTCGCATAAAGACGTTGAAGCGCTCATAACAGGCAATCACAGAAATGCGCGGCCCGTCATGCAGTGGGTTTGGTTGGAATGACGATGCGAAGTGCATCGTTGCTGAGAACGAGTTATTTGACAACTGGGTCATGGTATGTGAAAAGTCTAATATTTGATTTTTCTTTCCTATGCAGAGTCATCCTACAGCGAAGGGGCTGCTAAATAACCCTTTCCCATATTACGACGAGTTGGCGTATGTATTCGGGAAAGATCGTGCAACGGGCGCCCATGTAGAGACCTTTGCCGATGTCGGATCCAACGTTCCTCCTGGGTTTGAGGAATTTCCTCACGTGGATCTCAATGATATGGAAATTCCTTCCATGTCCAGCCATAGGTTTAACATGTCACAAGACGACATCGCACGACCAGGTCGAGGAACCGATAATAGGACGACTTCAAGCGGCTCGAAGCGTAGGCGGGGAGGGCAGACTTCGAAAACAGCTGATGTCATTAAGGATGTCATGGCTCTTCAAACTGACCAAATGAGACTCATTGTAGAGTGGTCGCGCGATTGGCACTGGAGGATGAAAGCAGGGTCCGTAGAGAGGTGGTTCGCGCATTGCGTGTCATACATCAGCTCAGTATGTTGGACATGGCACAATGTAATCAAATACTAA aatggacagacgaactttttccattctatgtcacttactaaggacgattgttggtctgatgtcgaccgaaatcgtcgatgtcaaggagatggtcgccatgtttctgcatgtattggcacatgatgtcaagaatagaatcatccaacgggatttcgtgcgatcaggagagactgttttccgtcactttaacctcgtactactggcggtgttgcgattgcacgatgagttgttgaagaaaccccagccagtgactaacacacgcactgattcaagatggagttgcttcgagaactaccttggggcattggatgacacgtacatcaaggtgaacgtgccgcaaaccgataggcttaggtatagaacacgtaagggagaagttgccacaaacgtcctcggtgtgtgtgatatgaaaggcgacttcatcttcgtattggctggttggaaaggatctgcagcagattcacgcattcttcgagatgctattgcacaaccaaatggactgcatgttcctcaagataatcaaatcaaattagttcaatctgacgcattcataacaggtcattactatctatgcgacgccagatatcccaatgcagagggatttctagctccctatagaggacaaagataccacttgcaagagtggcgaggagcgggaaatgcccctgccaccgcgaaagagtacttcaacatgaaacattctaccgctaggaatgttattgaacgagcgttcgatgggtttggttggaatgacgatgcgaagtgcatcgttgctgagaacgagttatttgacaactgggtcatgagtcatcctacagcgaaggggctgctaaataaccctttcccatattacgacgagttggcgtatgtattcgggaaagatcgtgcaacgggcgcccatgtagagacctttgccgatgtcggatccaacgttcctcctgggtttgaggaatttcctcacgtggatctcaatgatatggaaattccttccatgtccagccataggtttaacatgtcacaagacgacatcgcacgaccaggtcgaggaaccgataataggacgacttcaagcggctcgaagcgtaggcggggagggcagacttcgaaaacagctgatgtcattaaggatgtcatggctcttcaaactgaccaaatgagactcattgtagagtggtcgcgcgattggcactggaggatgaaagcagggtccgtagagaggtggttcgcgcattgcgtgtcatacatcagctcagtatgttggacatggcacaatgtaatcaaatactaa AATGGACAGACGAACTTTTTCCATTCTATGTCACTTACTAAGGACGATTGTTGGTCTGATGTCGACCGAAATCGTCGATGTCAAGGAGATGGTCGCCATGTTTCTGCATGTATTGGCACATGATGTCAAGAATAGAATCATCCAACGGGATTTCGTGCGATCAGGAGAGACTGTTTTCCGTCACTTTAACCTCGTACTACTGGCGGTGTTGCGATTGCACGATGAGTTGTTGAAGAAACCCCAGCCAGTGACTAACACACGCACTGATTCAAGATGGAGTTGCTTCGAGAACTACCTTGGGGCATTGGATGACACGTACATCAAGGTGAACGTGCCGCAAACCGATAGGCTTAGGTATAGAACACGTAAGGGAGAAGTTGCCACAAACGTCCTCGGTGTGTGTGATATGAAAGGCGACTTCATCTTCGTATTGGCTGGTTGGAAAGGATCTGCAGCAGATTCACGCATTCTTCGAGATGCTATTGCACAACCAAATGGACTGCATGTTCCTCAAGATAATCAAATCAAATTAGTTCAATCTGACGCATTCATAACAGGTCATTACTATCTATGCGACGCCAGATATCCCAATGCAGAGGGATTTCTAGCTCCCTATAGAGGACAAAGATACCACTTGCAAGAGTGGCGAGGAGCGGGAAATGCCCCTGCCACCGCGAAAGAGTACTTCAACATGAAACATTCTACCGCTAGGAATGTTATTGAACGAGCGTTCGATGGGTTTGGTTGGAATGACGATGCGAAGTGCATCGTTGCTGAGAACGAGTTATTTGACAACTGGGTCATGAGTCATCCTACAGCGAAGGGGCTGCTAAATAACCCTTTCCCATATTACGACGAGTTGGCGTATGTATTCGGGAAAGATCGTGCAACGGGCGCCCATGTAGAGACCTTTGCCGATGTCGGATCCAACGTTCCTCCTGGGTTTGAGGAATTTCCTCACGTGGATCTCAATGATATGGAAATTCCTTCCATGTCCAGCCATAGGTTTAACATGTCACAAGACGACATCGCACGACCAGGTCGAGGAACCGATAATAGGACGACTTCAAGCGGCTCGAAGCGTAGGCGGGGAGGGCAGACTTCGAAAACAGCTGATGTCATTAAGGATGTCATGGCTCTTCAAACTGACCAAATGAGACTCATTGTAGAGTGGTCGCGCGATTGGCACTGGAGGATGAAAGCAGGGTCCGTAGAGAGGTGGTTCGCGCATTGCGTGTCATACATCAGCTCAGTATGTTGGACATGGCACAATGTAATCAAATACTAA MDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQSDAFITGHYYLCDARYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFDGFGWNDDAKCIVAENELFDNWVMSHPTAKGLLNNPFPYYDELAYVFGKDRATGAHVETFADVGSNVPPGFEEFPHVDLNDMEIPSMSSHRFNMSQDDIARPGRGTDNRTTSSGSKRRRGGQTSKTADVIKDVMALQTDQMRLIVEWSRDWHWRMKAGSVERWFAHCVSYISSVCWTWHNVIKY*
BLAST of Cucsa.036070 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 4.0e-103 Identity = 186/244 (76.23%), Postives = 208/244 (85.25%), Query Frame = 1
BLAST of Cucsa.036070 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 2.2e-37 Identity = 84/152 (55.26%), Postives = 103/152 (67.76%), Query Frame = 1
HSP 2 Score: 348.2 bits (892), Expect = 1.4e-92 Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 1
BLAST of Cucsa.036070 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 1.0e-34 Identity = 75/148 (50.68%), Postives = 98/148 (66.22%), Query Frame = 1
HSP 2 Score: 293.5 bits (750), Expect = 4.2e-76 Identity = 146/244 (59.84%), Postives = 178/244 (72.95%), Query Frame = 1
BLAST of Cucsa.036070 vs. TrEMBL
Match: A5BND9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027369 PE=4 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 1.5e-01 Identity = 30/101 (29.70%), Postives = 47/101 (46.53%), Query Frame = 1
HSP 2 Score: 272.3 bits (695), Expect = 9.9e-70 Identity = 136/244 (55.74%), Postives = 172/244 (70.49%), Query Frame = 1
BLAST of Cucsa.036070 vs. TrEMBL
Match: A0A061FY73_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014176 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06 Identity = 37/127 (29.13%), Postives = 63/127 (49.61%), Query Frame = 1
HSP 2 Score: 254.6 bits (649), Expect = 2.1e-64 Identity = 133/276 (48.19%), Postives = 171/276 (61.96%), Query Frame = 1
BLAST of Cucsa.036070 vs. TAIR10
Match: AT5G41980.1 (AT5G41980.1 Putative harbinger transposase-derived nuclease (InterPro:IPR006912)) HSP 1 Score: 134.8 bits (338), Expect = 1.3e-31 Identity = 84/245 (34.29%), Postives = 127/245 (51.84%), Query Frame = 1
BLAST of Cucsa.036070 vs. TAIR10
Match: AT1G43722.1 (AT1G43722.1 unknown protein) HSP 1 Score: 120.9 bits (302), Expect = 1.9e-27 Identity = 83/251 (33.07%), Postives = 125/251 (49.80%), Query Frame = 1
BLAST of Cucsa.036070 vs. TAIR10
Match: AT5G35695.1 (AT5G35695.1 Putative harbinger transposase-derived nuclease (InterPro:IPR006912)) HSP 1 Score: 85.1 bits (209), Expect = 1.1e-16 Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 1
BLAST of Cucsa.036070 vs. TAIR10
Match: AT5G28730.1 (AT5G28730.1 unknown protein) HSP 1 Score: 84.0 bits (206), Expect = 2.5e-16 Identity = 66/215 (30.70%), Postives = 96/215 (44.65%), Query Frame = 1
BLAST of Cucsa.036070 vs. TAIR10
Match: AT5G28950.1 (AT5G28950.1 unknown protein) HSP 1 Score: 73.2 bits (178), Expect = 4.5e-13 Identity = 33/81 (40.74%), Postives = 57/81 (70.37%), Query Frame = 1
BLAST of Cucsa.036070 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 383.3 bits (983), Expect = 5.7e-103 Identity = 186/244 (76.23%), Postives = 208/244 (85.25%), Query Frame = 1
BLAST of Cucsa.036070 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 164.9 bits (416), Expect = 3.2e-37 Identity = 84/152 (55.26%), Postives = 103/152 (67.76%), Query Frame = 1
HSP 2 Score: 375.9 bits (964), Expect = 9.1e-101 Identity = 184/244 (75.41%), Postives = 204/244 (83.61%), Query Frame = 1
BLAST of Cucsa.036070 vs. NCBI nr
Match: gi|659118458|ref|XP_008459130.1| (PREDICTED: putative nuclease HARBI1 [Cucumis melo]) HSP 1 Score: 374.8 bits (961), Expect = 2.0e-100 Identity = 183/244 (75.00%), Postives = 207/244 (84.84%), Query Frame = 1
BLAST of Cucsa.036070 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92 Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 1
BLAST of Cucsa.036070 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 156.0 bits (393), Expect = 1.5e-34 Identity = 75/148 (50.68%), Postives = 98/148 (66.22%), Query Frame = 1
HSP 2 Score: 337.8 bits (865), Expect = 2.8e-89 Identity = 165/226 (73.01%), Postives = 190/226 (84.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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