CSPI07G14280.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCCACTATCTCGTGTCTCCACGAGAGCCCGAGAGTCCGAGACACTTCCAGAGACCATTAGGAAGCAAATTCAACACATTCCGTCGCCAGCGCTTTACAAAACAATATGATAATACCCATTTAGAGCTTCAGATTGCGATGGAGAAGACACTTCAGAAACTCACAACAATTCATTTATTTTGCCCTTCACTCTCCACCTTTGCTCCATTCCTAGCTTCCCAAGACAATCCCATCGATATCGGCTCCATAGCCGCCATTTTTGGCCTTGACCCTTCATCGCTGAAGCTCAATGGTCACTTCCTCAGCCGTGGCCGCGATCTCATTTCCTCTGTTACTTGGAACTCTCTTCTCTCTTTCTTCTCTACTAAACGCCTCCCAATTGGCAGCTCCCAGCATGAGGCTCTTCTCGTTGATGGAAAGCTCTCTAAAATTGGCGCCAAGAGTGAGTTCTCTTTATTCTCTTCTTCCTCTGGCTTTTGTTTTGTTCCAGGACTCTGTTTCTACGGACTAGGGTATCTGTTCTTTTACTGAGAAAGCTGAAACTCGAAATTAGTTATCTTTTTGTTTTTTTTAATGATAAACTGTTTATTAGGTTGTAATTTTCTTTTTCTTTTTTTGTTTCTCTTTTTAGGGGTTCATGGTTTTCATGAATTTGTAAGTGGAGATCATTATGAGGCTGATGAAGAATATGGTGATGTTAATGTTGGGAGGATAAAACCAGAAGGCAACTTGGTCAAGAGCAAAAAGATGAAGTTTATGGACTTAGGTAAAATCTTTAAATACTGTATGAAAGAAGCTTAAAATTGGGATGATCTTCAGTTGGCTTATTTTCTGACTTGAATTATTGTTAAATGAGTAGTAGGCACTAAACAAGAAGTTCAAGAACTAAATTTACTTTACACTGTAAACAAATTAAGGAAGGAAAAAAAAGGCAACCTTTGGAGATCTTATGAGTTTGAAGAACTGATTACATTGATCTGGAACTTATTTGTGTTTGATCTAATACAGGAACCAAACATATGGATTCTCCATCATCCGAATTTAGTCCAAATAGTTGTAAAAGAAAACAACAAATGGAAGAAGTCATCTTACTCAAGAAATTGAAGTTAAACGAAACCAAATCAGGTACATAGTCAAGACTTAAGACTAGTTTTGTGGTGGCTTTTCCATATATAATCAGTTTGCCAAGTGTTGTTACTTGTATTCTTTTGTGTCCTTGACACTCGAATGATCATATTATTCAGGTTTCGATGGATTATCGGACGGAGGAGTGAGCGACACACCCAATGTTGGCCAACGGATGATTTATTCGTGTAGCTTCAACAGTAATATGAAAAGAATGAGAGAAGAAGAAACACTTGTTTCTGTTTTATGCAAGAGAAGTAGATGAGCACATGGTTTCCCCAAGCCAGTCCACCCTATTTCTAACTTTTTCTTCGTTGAGGTTTGTAAATATGAAAAAGGTCACTGTGTTCTACGGTGATTCTCAATATGTAAATCTACTGGTTGGTATAGAATTGTAGTTTTGTAGTTTTGTAATTTTGTTCAACAATCTTATATCTCATTTACCCCAATTAAAAGGGGTGTCTTGGGGATGGAAAGGAATAAAGGCGGAAAGGATTATGCAAAGGAGAATATTATTATCATTTTTGTTTGGGGAAATACTAGGAGGA ATGGAGAAGACACTTCAGAAACTCACAACAATTCATTTATTTTGCCCTTCACTCTCCACCTTTGCTCCATTCCTAGCTTCCCAAGACAATCCCATCGATATCGGCTCCATAGCCGCCATTTTTGGCCTTGACCCTTCATCGCTGAAGCTCAATGGTCACTTCCTCAGCCGTGGCCGCGATCTCATTTCCTCTGTTACTTGGAACTCTCTTCTCTCTTTCTTCTCTACTAAACGCCTCCCAATTGGCAGCTCCCAGCATGAGGCTCTTCTCGTTGATGGAAAGCTCTCTAAAATTGGCGCCAAGAGGGTTCATGGTTTTCATGAATTTGTAAGTGGAGATCATTATGAGGCTGATGAAGAATATGGTGATGTTAATGTTGGGAGGATAAAACCAGAAGGCAACTTGGTCAAGAGCAAAAAGATGAAGTTTATGGACTTAGGAACCAAACATATGGATTCTCCATCATCCGAATTTAGTCCAAATAGTTGTAAAAGAAAACAACAAATGGAAGAAGTCATCTTACTCAAGAAATTGAAGTTAAACGAAACCAAATCAGGTTTCGATGGATTATCGGACGGAGGAGTGAGCGACACACCCAATGTTGGCCAACGGATGATTTATTCGTGTAGCTTCAACAGTAATATGAAAAGAATGAGAGAAGAAGAAACACTTGTTTCTGTTTTATGCAAGAGAAGTAGATGA ATGGAGAAGACACTTCAGAAACTCACAACAATTCATTTATTTTGCCCTTCACTCTCCACCTTTGCTCCATTCCTAGCTTCCCAAGACAATCCCATCGATATCGGCTCCATAGCCGCCATTTTTGGCCTTGACCCTTCATCGCTGAAGCTCAATGGTCACTTCCTCAGCCGTGGCCGCGATCTCATTTCCTCTGTTACTTGGAACTCTCTTCTCTCTTTCTTCTCTACTAAACGCCTCCCAATTGGCAGCTCCCAGCATGAGGCTCTTCTCGTTGATGGAAAGCTCTCTAAAATTGGCGCCAAGAGGGTTCATGGTTTTCATGAATTTGTAAGTGGAGATCATTATGAGGCTGATGAAGAATATGGTGATGTTAATGTTGGGAGGATAAAACCAGAAGGCAACTTGGTCAAGAGCAAAAAGATGAAGTTTATGGACTTAGGAACCAAACATATGGATTCTCCATCATCCGAATTTAGTCCAAATAGTTGTAAAAGAAAACAACAAATGGAAGAAGTCATCTTACTCAAGAAATTGAAGTTAAACGAAACCAAATCAGGTTTCGATGGATTATCGGACGGAGGAGTGAGCGACACACCCAATGTTGGCCAACGGATGATTTATTCGTGTAGCTTCAACAGTAATATGAAAAGAATGAGAGAAGAAGAAACACTTGTTTCTGTTTTATGCAAGAGAAGTAGATGA
BLAST of CSPI07G14280.1 vs. TrEMBL
Match: A0A0A0K4J5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G341200 PE=4 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 5.9e-125 Identity = 229/233 (98.28%), Postives = 230/233 (98.71%), Query Frame = 1
BLAST of CSPI07G14280.1 vs. TrEMBL
Match: A0A061DN85_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002896 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.7e-37 Identity = 105/231 (45.45%), Postives = 141/231 (61.04%), Query Frame = 1
BLAST of CSPI07G14280.1 vs. TrEMBL
Match: V7APH4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G020400g PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.8e-36 Identity = 105/226 (46.46%), Postives = 136/226 (60.18%), Query Frame = 1
BLAST of CSPI07G14280.1 vs. TrEMBL
Match: W9RYP4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007036 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 6.3e-34 Identity = 95/225 (42.22%), Postives = 132/225 (58.67%), Query Frame = 1
BLAST of CSPI07G14280.1 vs. TrEMBL
Match: F6HRF0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0185g00040 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.4e-33 Identity = 97/241 (40.25%), Postives = 137/241 (56.85%), Query Frame = 1
BLAST of CSPI07G14280.1 vs. TAIR10
Match: AT3G07150.1 (AT3G07150.1 unknown protein) HSP 1 Score: 122.9 bits (307), Expect = 2.7e-28 Identity = 88/226 (38.94%), Postives = 120/226 (53.10%), Query Frame = 1
BLAST of CSPI07G14280.1 vs. NCBI nr
Match: gi|449443734|ref|XP_004139632.1| (PREDICTED: uncharacterized protein LOC101203142 [Cucumis sativus]) HSP 1 Score: 454.9 bits (1169), Expect = 8.5e-125 Identity = 229/233 (98.28%), Postives = 230/233 (98.71%), Query Frame = 1
BLAST of CSPI07G14280.1 vs. NCBI nr
Match: gi|659116331|ref|XP_008458021.1| (PREDICTED: uncharacterized protein LOC103497564 [Cucumis melo]) HSP 1 Score: 405.6 bits (1041), Expect = 5.9e-110 Identity = 207/233 (88.84%), Postives = 214/233 (91.85%), Query Frame = 1
BLAST of CSPI07G14280.1 vs. NCBI nr
Match: gi|951034658|ref|XP_014516088.1| (PREDICTED: uncharacterized protein LOC106773845 [Vigna radiata var. radiata]) HSP 1 Score: 166.0 bits (419), Expect = 7.8e-38 Identity = 108/228 (47.37%), Postives = 140/228 (61.40%), Query Frame = 1
BLAST of CSPI07G14280.1 vs. NCBI nr
Match: gi|590713793|ref|XP_007049735.1| (Uncharacterized protein TCM_002896 [Theobroma cacao]) HSP 1 Score: 163.7 bits (413), Expect = 3.9e-37 Identity = 105/231 (45.45%), Postives = 141/231 (61.04%), Query Frame = 1
BLAST of CSPI07G14280.1 vs. NCBI nr
Match: gi|1009149224|ref|XP_015892368.1| (PREDICTED: uncharacterized protein LOC107426645 [Ziziphus jujuba]) HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36 Identity = 105/230 (45.65%), Postives = 137/230 (59.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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