CSPI07G13140.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI07G13140.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionPlasma membrane ATPase
LocationChr7 : 11542575 .. 11543145 (-)
Sequence length201
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAACAAAGATGAAGTCTTGGAAGTTGTTGTGAAGGAAGCTCTTGATTTGGTACCTTTAATTTGTTGCTATATGGTTTTTTTCCTTCTATATTTGTCCTGTTTTTTATTGGGCTTCTTAAATTTTTAGGAGAATGTTCCACTTGAAGAGGTTTTTGAAACGTTGAGATGTAATAGAAATCAGAGGAAGGTATACCATTGCCCTCGTTACTTTTATTACAATGTAGCATTTCTTGTAGATTTGCTTCACTTTTATTTTTCTGAAGTGTAAAAATGAATGTGTTCTTCTCTTTGACTTTTTAGAATTGTAGTTGGAAGAGTGTAATGTATTCAGCCGTTGGGACCATGTTGTGATTGTGCATATTCCTTTGATGAAAAACCTATCTTTACATTCTGATTTGAACTATTGTGCACTGATGTTTCTTGTTGTTTAAATTTGATTGTTTATGGTGGATCTCAACTTATTTCGATGTCTTTCACAGGAAGCAATCATTAGACAAATGATTGCAATAGAAGAAATGGCTGCTAGTACAATTAGTCAAGCCCTCATCTTTATGACAAGATCTTGA

mRNA sequence

ATGGCGAACAAAGATGAAGTCTTGGAAGTTGTTGTGAAGGAAGCTCTTGATTTGGAGAATGTTCCACTTGAAGAGGTTTTTGAAACGTTGAGATGTAATAGAAATCAGAGGAAGGAAGCAATCATTAGACAAATGATTGCAATAGAAGAAATGGCTGCTAGTACAATTAGTCAAGCCCTCATCTTTATGACAAGATCTTGA

Coding sequence (CDS)

ATGGCGAACAAAGATGAAGTCTTGGAAGTTGTTGTGAAGGAAGCTCTTGATTTGGAGAATGTTCCACTTGAAGAGGTTTTTGAAACGTTGAGATGTAATAGAAATCAGAGGAAGGAAGCAATCATTAGACAAATGATTGCAATAGAAGAAATGGCTGCTAGTACAATTAGTCAAGCCCTCATCTTTATGACAAGATCTTGA
Homology
[Close]
BLAST of CSPI07G13140.1 vs. Swiss-Prot
Match: PMA11_ARATH (ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.7e-06
Identity = 24/34 (70.59%), Postives = 31/34 (91.18%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNR 35
          M +K+EVLE V+KE +DLENVP+EEVFE+LRC+R
Sbjct: 1  MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSR 34

[Close]
BLAST of CSPI07G13140.1 vs. TrEMBL
Match: A0A0A0K4Z8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G321560 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-24
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNRNQRKEAIIRQMIAIEEMAASTISQAL 60
          MANKDEVLEVVVKEALDLENVP EEVFETLRCNRNQRKEAIIRQMIAIEEMAASTISQAL
Sbjct: 1  MANKDEVLEVVVKEALDLENVPPEEVFETLRCNRNQRKEAIIRQMIAIEEMAASTISQAL 60

Query: 61 IFMTRS 67
          IFMTRS
Sbjct: 61 IFMTRS 66

[Close]
BLAST of CSPI07G13140.1 vs. TrEMBL
Match: A0A0A0KVH3_CUCSA (Plasma membrane ATPase OS=Cucumis sativus GN=Csa_5G635370 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.1e-07
Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNRNQRKEAIIRQMIAI------EEMAAS 60
          M +KDEVLE VVKEA+DLENVPLEEVF+TLRCN+N        + +AI      EE   S
Sbjct: 1  MGDKDEVLEAVVKEAVDLENVPLEEVFQTLRCNKNGLTTEAAHERLAIFGHNKLEEKKES 60

Query: 61 TISQALIFM 64
           + + L FM
Sbjct: 61 KLLKFLGFM 69

[Close]
BLAST of CSPI07G13140.1 vs. TrEMBL
Match: A0A0D2RP75_GOSRA (Plasma membrane ATPase OS=Gossypium raimondii GN=B456_006G023600 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.0e-06
Identity = 35/69 (50.72%), Postives = 44/69 (63.77%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNRNQRKEAIIRQMIAI------EEMAAS 60
          M NKDE ++ V+KEA+DLENVPLEEVF+TLRCNR+        Q ++I      EE   S
Sbjct: 1  MENKDETMDAVLKEAVDLENVPLEEVFQTLRCNRDGLTTEAAEQRLSIFGYNKLEEKQES 60

Query: 61 TISQALIFM 64
           I + L FM
Sbjct: 61 KILKFLGFM 69

[Close]
BLAST of CSPI07G13140.1 vs. TrEMBL
Match: A0A0D2RVZ5_GOSRA (Plasma membrane ATPase OS=Gossypium raimondii GN=B456_006G023600 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.0e-06
Identity = 35/69 (50.72%), Postives = 44/69 (63.77%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNRNQRKEAIIRQMIAI------EEMAAS 60
          M NKDE ++ V+KEA+DLENVPLEEVF+TLRCNR+        Q ++I      EE   S
Sbjct: 1  MENKDETMDAVLKEAVDLENVPLEEVFQTLRCNRDGLTTEAAEQRLSIFGYNKLEEKQES 60

Query: 61 TISQALIFM 64
           I + L FM
Sbjct: 61 KILKFLGFM 69

[Close]
BLAST of CSPI07G13140.1 vs. TrEMBL
Match: A0A0D2NKP5_GOSRA (Plasma membrane ATPase OS=Gossypium raimondii GN=B456_006G023600 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.0e-06
Identity = 35/69 (50.72%), Postives = 44/69 (63.77%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNRNQRKEAIIRQMIAI------EEMAAS 60
          M NKDE ++ V+KEA+DLENVPLEEVF+TLRCNR+        Q ++I      EE   S
Sbjct: 1  MENKDETMDAVLKEAVDLENVPLEEVFQTLRCNRDGLTTEAAEQRLSIFGYNKLEEKQES 60

Query: 61 TISQALIFM 64
           I + L FM
Sbjct: 61 KILKFLGFM 69

[Close]
BLAST of CSPI07G13140.1 vs. TAIR10
Match: AT5G62670.1 (AT5G62670.1 H(+)-ATPase 11)

HSP 1 Score: 52.8 bits (125), Expect = 9.8e-08
Identity = 24/34 (70.59%), Postives = 31/34 (91.18%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNR 35
          M +K+EVLE V+KE +DLENVP+EEVFE+LRC+R
Sbjct: 1  MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSR 34

[Close]
BLAST of CSPI07G13140.1 vs. TAIR10
Match: AT3G47950.1 (AT3G47950.1 H(+)-ATPase 4)

HSP 1 Score: 47.4 bits (111), Expect = 4.1e-06
Identity = 22/29 (75.86%), Postives = 27/29 (93.10%), Query Frame = 1 

Query: 6  EVLEVVVKEALDLENVPLEEVFETLRCNR 35
          EVLE V+KEA+DLENVP+EEVFE LRC++
Sbjct: 10 EVLEAVLKEAVDLENVPIEEVFENLRCSK 38

[Close]
BLAST of CSPI07G13140.1 vs. NCBI nr
Match: gi|700189275|gb|KGN44508.1| (hypothetical protein Csa_7G321560 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 3.1e-24
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNRNQRKEAIIRQMIAIEEMAASTISQAL 60
          MANKDEVLEVVVKEALDLENVP EEVFETLRCNRNQRKEAIIRQMIAIEEMAASTISQAL
Sbjct: 1  MANKDEVLEVVVKEALDLENVPPEEVFETLRCNRNQRKEAIIRQMIAIEEMAASTISQAL 60

Query: 61 IFMTRS 67
          IFMTRS
Sbjct: 61 IFMTRS 66

[Close]
BLAST of CSPI07G13140.1 vs. NCBI nr
Match: gi|659118766|ref|XP_008459294.1| (PREDICTED: ATPase 11, plasma membrane-type-like [Cucumis melo])

HSP 1 Score: 61.2 bits (147), Expect = 7.8e-07
Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNRNQRKEAIIRQMIAI------EEMAAS 60
          M +KDEVLE VVKEA+DLENVPLEEVF+TLRCN+N        + +AI      EE   S
Sbjct: 1  MGDKDEVLEAVVKEAVDLENVPLEEVFQTLRCNKNGLTTEAAHERLAIFGQNKLEEKKES 60

Query: 61 TISQALIFM 64
           + + L FM
Sbjct: 61 KVLKFLGFM 69

[Close]
BLAST of CSPI07G13140.1 vs. NCBI nr
Match: gi|449461911|ref|XP_004148685.1| (PREDICTED: ATPase 11, plasma membrane-type-like [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-06
Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNRNQRKEAIIRQMIAI------EEMAAS 60
          M +KDEVLE VVKEA+DLENVPLEEVF+TLRCN+N        + +AI      EE   S
Sbjct: 1  MGDKDEVLEAVVKEAVDLENVPLEEVFQTLRCNKNGLTTEAAHERLAIFGHNKLEEKKES 60

Query: 61 TISQALIFM 64
           + + L FM
Sbjct: 61 KLLKFLGFM 69

[Close]
BLAST of CSPI07G13140.1 vs. NCBI nr
Match: gi|700197265|gb|KGN52442.1| (hypothetical protein Csa_5G635370 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-06
Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNRNQRKEAIIRQMIAI------EEMAAS 60
          M +KDEVLE VVKEA+DLENVPLEEVF+TLRCN+N        + +AI      EE   S
Sbjct: 1  MGDKDEVLEAVVKEAVDLENVPLEEVFQTLRCNKNGLTTEAAHERLAIFGHNKLEEKKES 60

Query: 61 TISQALIFM 64
           + + L FM
Sbjct: 61 KLLKFLGFM 69

[Close]
BLAST of CSPI07G13140.1 vs. NCBI nr
Match: gi|763766428|gb|KJB33643.1| (hypothetical protein B456_006G023600 [Gossypium raimondii])

HSP 1 Score: 57.8 bits (138), Expect = 8.6e-06
Identity = 35/69 (50.72%), Postives = 44/69 (63.77%), Query Frame = 1 

Query: 1  MANKDEVLEVVVKEALDLENVPLEEVFETLRCNRNQRKEAIIRQMIAI------EEMAAS 60
          M NKDE ++ V+KEA+DLENVPLEEVF+TLRCNR+        Q ++I      EE   S
Sbjct: 1  MENKDETMDAVLKEAVDLENVPLEEVFQTLRCNRDGLTTEAAEQRLSIFGYNKLEEKQES 60

Query: 61 TISQALIFM 64
           I + L FM
Sbjct: 61 KILKFLGFM 69

The following BLAST results are available for this feature:
BLAST of CSPI07G13140.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PMA11_ARATH1.7e-0670.59ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1[more]
BLAST of CSPI07G13140.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4Z8_CUCSA2.2e-2498.48Uncharacterized protein OS=Cucumis sativus GN=Csa_7G321560 PE=4 SV=1[more]
A0A0A0KVH3_CUCSA7.1e-0753.62Plasma membrane ATPase OS=Cucumis sativus GN=Csa_5G635370 PE=3 SV=1[more]
A0A0D2RP75_GOSRA6.0e-0650.72Plasma membrane ATPase OS=Gossypium raimondii GN=B456_006G023600 PE=3 SV=1[more]
A0A0D2RVZ5_GOSRA6.0e-0650.72Plasma membrane ATPase OS=Gossypium raimondii GN=B456_006G023600 PE=3 SV=1[more]
A0A0D2NKP5_GOSRA6.0e-0650.72Plasma membrane ATPase OS=Gossypium raimondii GN=B456_006G023600 PE=3 SV=1[more]
BLAST of CSPI07G13140.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G62670.19.8e-0870.59 H(+)-ATPase 11[more]
AT3G47950.14.1e-0675.86 H(+)-ATPase 4[more]
BLAST of CSPI07G13140.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189275|gb|KGN44508.1|3.1e-2498.48hypothetical protein Csa_7G321560 [Cucumis sativus][more]
gi|659118766|ref|XP_008459294.1|7.8e-0753.62PREDICTED: ATPase 11, plasma membrane-type-like [Cucumis melo][more]
gi|449461911|ref|XP_004148685.1|1.0e-0653.62PREDICTED: ATPase 11, plasma membrane-type-like [Cucumis sativus][more]
gi|700197265|gb|KGN52442.1|1.0e-0653.62hypothetical protein Csa_5G635370 [Cucumis sativus][more]
gi|763766428|gb|KJB33643.1|8.6e-0650.72hypothetical protein B456_006G023600 [Gossypium raimondii][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005488 binding
molecular_function GO:0016787 hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI07G13140CSPI07G13140gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI07G13140.1CSPI07G13140.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI07G13140.1.cds3CSPI07G13140.1.cds3CDS
CSPI07G13140.1.cds2CSPI07G13140.1.cds2CDS
CSPI07G13140.1.cds1CSPI07G13140.1.cds1CDS