CSPI07G12110.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGAACTGCAAATTCCACACACAAATTCAGCATTACCAAATCCAAAATTCTTCTCTCAAATTAATTTCAAATTTCCCAAAATCAAAATTCTCAATTCCATCCAAAAAAAATCCATGGCGGTTGAAGAAGATTTCAGTTTCCCCACCGCCTTGGAGCCTTTCAACCGCTGCGGCATCGATTCGCCGCCTCTCTGGCATCTATCTCCGTCCGCATCTCCGATTTCCTACCCTCAACAAACATCTTGCGATTGGAATTTCAGAGATACGGCGTCGGACGGTGAGATTAGTAATCGGTTCCCATCGGCGTCGTTGCAGAGGAGGAGGAGGTTTTTGAGCGATGCGGCAGTGAACTGCGAGGAGGAGGAGGAGGCGGAGGCGGCGGAGAAGATGGACGTGCTTTGGGAGAATTTCAATGAGGAGTTGTCGAGGAGTCGGAGATCTAGGTTGATGAAAACGGCAGAAACGGAGGAGAATGAGACCGTGAAGGCGCGACGGCGGATGGCGGAATTTAACCTATCGGAGACTTCCGGCGCGATGGCGACGAGGAGGAAGACGATGGGGAAGACGGCGTTTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCATAATAATTCCCGCCGGAATCTGCAAACTCGATCACGGTGATAAATACAGAGGATTTTTTTTTGGAGGGGGAAAATAAACTGAGAAAATGAAAATGTATAAATTAAAAAGAG ATGGCGGTTGAAGAAGATTTCAGTTTCCCCACCGCCTTGGAGCCTTTCAACCGCTGCGGCATCGATTCGCCGCCTCTCTGGCATCTATCTCCGTCCGCATCTCCGATTTCCTACCCTCAACAAACATCTTGCGATTGGAATTTCAGAGATACGGCGTCGGACGGTGAGATTAGTAATCGGTTCCCATCGGCGTCGTTGCAGAGGAGGAGGAGGTTTTTGAGCGATGCGGCAGTGAACTGCGAGGAGGAGGAGGAGGCGGAGGCGGCGGAGAAGATGGACGTGCTTTGGGAGAATTTCAATGAGGAGTTGTCGAGGAGTCGGAGATCTAGGTTGATGAAAACGGCAGAAACGGAGGAGAATGAGACCGTGAAGGCGCGACGGCGGATGGCGGAATTTAACCTATCGGAGACTTCCGGCGCGATGGCGACGAGGAGGAAGACGATGGGGAAGACGGCGTTTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCATAATAATTCCCGCCGGAATCTGCAAACTCGATCACGGTGA ATGGCGGTTGAAGAAGATTTCAGTTTCCCCACCGCCTTGGAGCCTTTCAACCGCTGCGGCATCGATTCGCCGCCTCTCTGGCATCTATCTCCGTCCGCATCTCCGATTTCCTACCCTCAACAAACATCTTGCGATTGGAATTTCAGAGATACGGCGTCGGACGGTGAGATTAGTAATCGGTTCCCATCGGCGTCGTTGCAGAGGAGGAGGAGGTTTTTGAGCGATGCGGCAGTGAACTGCGAGGAGGAGGAGGAGGCGGAGGCGGCGGAGAAGATGGACGTGCTTTGGGAGAATTTCAATGAGGAGTTGTCGAGGAGTCGGAGATCTAGGTTGATGAAAACGGCAGAAACGGAGGAGAATGAGACCGTGAAGGCGCGACGGCGGATGGCGGAATTTAACCTATCGGAGACTTCCGGCGCGATGGCGACGAGGAGGAAGACGATGGGGAAGACGGCGTTTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCATAATAATTCCCGCCGGAATCTGCAAACTCGATCACGGTGA
BLAST of CSPI07G12110.1 vs. TrEMBL
Match: A0A0A0K672_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G283910 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 2.5e-91 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1
BLAST of CSPI07G12110.1 vs. TrEMBL
Match: B9SLG7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0686540 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 9.3e-14 Identity = 65/191 (34.03%), Postives = 105/191 (54.97%), Query Frame = 1
BLAST of CSPI07G12110.1 vs. TrEMBL
Match: A0A061FJY8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_036336 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 7.8e-13 Identity = 69/176 (39.20%), Postives = 95/176 (53.98%), Query Frame = 1
BLAST of CSPI07G12110.1 vs. TrEMBL
Match: U5FEQ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s11420g PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.5e-11 Identity = 66/184 (35.87%), Postives = 93/184 (50.54%), Query Frame = 1
BLAST of CSPI07G12110.1 vs. TrEMBL
Match: A0A0L9TCQ6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan518s000100 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.1e-09 Identity = 57/166 (34.34%), Postives = 83/166 (50.00%), Query Frame = 1
BLAST of CSPI07G12110.1 vs. NCBI nr
Match: gi|778730295|ref|XP_011659753.1| (PREDICTED: uncharacterized protein LOC105436259 [Cucumis sativus]) HSP 1 Score: 342.8 bits (878), Expect = 3.5e-91 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1
BLAST of CSPI07G12110.1 vs. NCBI nr
Match: gi|659123054|ref|XP_008461465.1| (PREDICTED: uncharacterized protein LOC103500054 isoform X1 [Cucumis melo]) HSP 1 Score: 291.2 bits (744), Expect = 1.2e-75 Identity = 156/178 (87.64%), Postives = 161/178 (90.45%), Query Frame = 1
BLAST of CSPI07G12110.1 vs. NCBI nr
Match: gi|255571786|ref|XP_002526836.1| (PREDICTED: uncharacterized protein LOC8262733 [Ricinus communis]) HSP 1 Score: 85.1 bits (209), Expect = 1.3e-13 Identity = 65/191 (34.03%), Postives = 105/191 (54.97%), Query Frame = 1
BLAST of CSPI07G12110.1 vs. NCBI nr
Match: gi|590603254|ref|XP_007019958.1| (Uncharacterized protein TCM_036336 [Theobroma cacao]) HSP 1 Score: 82.0 bits (201), Expect = 1.1e-12 Identity = 69/176 (39.20%), Postives = 95/176 (53.98%), Query Frame = 1
BLAST of CSPI07G12110.1 vs. NCBI nr
Match: gi|566240759|ref|XP_006371471.1| (hypothetical protein POPTR_0019s11420g [Populus trichocarpa]) HSP 1 Score: 77.0 bits (188), Expect = 3.6e-11 Identity = 66/184 (35.87%), Postives = 93/184 (50.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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