CSPI07G05800.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCCCCACTTCTTCAATAGTATTAAGGTTTTAGTTTTACTTCTTTCTGTGATCATCTTTAGATATCATCAGTATAACTTTGAGAGGTCGTCTCTGTGTTCAGACATGTCGTCCAAGTTTGGTCATTGGAGAACCTTGCTTCTTCAACTCTTTCGTAAGACAGACGACTCTTCCTCGACATATCGTCGTCGTCGGGTATCCGAACCTCTGCAGGCCTCCTCCTCCTCCTCCTCCTCGGTCGCCATGGTCCCATTTGGATCCACAACTTATATGTCATCCCTACTCAGATCCTACTGTTGTCGTCCCAGCTGGTTAGTATTTTAGATGTGATAATATTTTGCAAAATATTTGATCTTTGAAGAGTCTAATATAATCCTTCCTTTTGGTTTTGAATTTGAATAATGGATATAGGATGAGACGAGAGAAAGAGGAAAGTAAAGATGAAGATCGGCCATCAATATCAACTTTTTTCTTCTTCGTCCCTCCTAATTGGTAATTAACTCAAAAACAATATATATTCAAAATTCTAATCTTCAATTATTTTTTATTTTTATATTTTATCACAATTTTAGTCATTATTTATTCTTCATTGATTGAATGAATTCAGGGCAAAGTGGATTTTTGGAGCCCTATTGTCCCTATTGGTACCCAATTGGAATAAATTGCAAAGAATTGAAGGTATATTATTTGAGCAATTGTAAAAAAAAATTAGTAAATTTGACAAAAAATTTATCGGCTAAATTTTCAAATTCTATCAATATTTATCCGTAACATTAATAGAATCCTATCCGTTTTGATCGTTATTGAATCTAAAATTTTATTATTGCTTATAAATATTTTAATTTATTTTGTTATTTTTAAAAATATTGTTATGTATTTTCTAATTATTTTTTGTTTTATTATTATTATTATTTCAATTTAAATAATAGATTTGGGATATGGTTGTTTTTCAATTTTGAAATTACCTTTTTTTAATTTTAAAAAAAATTATTAGAAATTGGGTGAAAGTAATGTTTGGACAAAGAAAATTTAAAAAACTAAATCCAATTTTGGTAACTATTTTATTTTTAAAAATTGTAATTGTTATATTCCAATATAAACATTTGAAATTTTAGTCGATTTCTAAAAATTAAAACAAGTTTTTCTAAAACTCCTCGTTCTTTTTTTCGTTTATGGTTTTGATTTTGAAAAACACTTCTAAAATCTAACAACAAAACATATAAATCAACACGTGAATGTGATATTTATTGATTTAAACTTTTAAAAATAGGATATTAAAATTTCTTAATAATCAATAGTCACCTGTCTTGAAAAAAAAAGTTATATTTATCGATTATAGTCGATAGGTTAGTGTAGAATTAAAGAAACAGAAAACTCAACTGCTAAATTGTAAAAATATATTTTTACGATTAATACTTTTGTCGACATGAAACTAATAAGTTGATATGTGATTGACATCGAATGTTTAGATGAAGCGGAAATGGTGATCGAAGAGGCGGAAAATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAACTAACAGAGAAAGTATCAACAAAAATTTGTGAGAAACTTCCTGAGAAGAGTAAGCTGAAAGAGGCAGCTGAAGTTGTAGAAAGTTATTCTAAGGAAATTGCCCATGATGCTCACCTAACACAAGATATCCTCCACAAGGTTTGTATATATCTCTCTATCTAATTTCATTTCTTTTTTCGTGTTTCATCCACGAGGTTTCACCAACCGAGTCATCTTTCATCGCTGAAAATTTATTGAAAATTGTCAAATTTCGAATTTTAGAAACAAACTTATGTGTTCTTGTCTCTTTTTTATCGTAGGTGGAAGAGTGGAAGCTAAAAGTAGATAAGTCGAAGATAGATACGAACGAACCGAATAAAGAAGAAATAAGGCAGATTAGAGCAAACAAGTGACAAAGCATTCAAATGTCGGATCAATATATATATATATATATTATTAAATATAATACCTATTTTCAAATGTCCAATATATATCTACTAAAAGTGTGAATGGTAGATAAAGACACGCTACAATTAGTAGATATTAAATCTTAGATAGGTGATCATCACGGATAGGGAAATATGGATTTCAGTATATGATGGCCAACTACTATATAAAGATTATTTTAATATTGAACGGGTTTTCTT ATGTCGTCCAAGTTTGGTCATTGGAGAACCTTGCTTCTTCAACTCTTTCGTAAGACAGACGACTCTTCCTCGACATATCGTCGTCGTCGGGTATCCGAACCTCTGCAGGCCTCCTCCTCCTCCTCCTCCTCGGTCGCCATGGTCCCATTTGGATCCACAACTTATATGTCATCCCTACTCAGATCCTACTGTTGTCGTCCCAGCTGGATGAGACGAGAGAAAGAGGAAAGTAAAGATGAAGATCGGCCATCAATATCAACTTTTTTCTTCTTCGTCCCTCCTAATTGGGCAAAGTGGATTTTTGGAGCCCTATTGTCCCTATTGGTACCCAATTGGAATAAATTGCAAAGAATTGAAGATGAAGCGGAAATGGTGATCGAAGAGGCGGAAAATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAACTAACAGAGAAAGTATCAACAAAAATTTGTGAGAAACTTCCTGAGAAGAGTAAGCTGAAAGAGGCAGCTGAAGTTGTAGAAAGTTATTCTAAGGAAATTGCCCATGATGCTCACCTAACACAAGATATCCTCCACAAGGTGGAAGAGTGGAAGCTAAAAGTAGATAAGTCGAAGATAGATACGAACGAACCGAATAAAGAAGAAATAAGGCAGATTAGAGCAAACAAGTGA ATGTCGTCCAAGTTTGGTCATTGGAGAACCTTGCTTCTTCAACTCTTTCGTAAGACAGACGACTCTTCCTCGACATATCGTCGTCGTCGGGTATCCGAACCTCTGCAGGCCTCCTCCTCCTCCTCCTCCTCGGTCGCCATGGTCCCATTTGGATCCACAACTTATATGTCATCCCTACTCAGATCCTACTGTTGTCGTCCCAGCTGGATGAGACGAGAGAAAGAGGAAAGTAAAGATGAAGATCGGCCATCAATATCAACTTTTTTCTTCTTCGTCCCTCCTAATTGGGCAAAGTGGATTTTTGGAGCCCTATTGTCCCTATTGGTACCCAATTGGAATAAATTGCAAAGAATTGAAGATGAAGCGGAAATGGTGATCGAAGAGGCGGAAAATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAACTAACAGAGAAAGTATCAACAAAAATTTGTGAGAAACTTCCTGAGAAGAGTAAGCTGAAAGAGGCAGCTGAAGTTGTAGAAAGTTATTCTAAGGAAATTGCCCATGATGCTCACCTAACACAAGATATCCTCCACAAGGTGGAAGAGTGGAAGCTAAAAGTAGATAAGTCGAAGATAGATACGAACGAACCGAATAAAGAAGAAATAAGGCAGATTAGAGCAAACAAGTGA
BLAST of CSPI07G05800.1 vs. TrEMBL
Match: A0A0A0K622_CUCSA (Alkyl transferase OS=Cucumis sativus GN=Csa_7G064570 PE=3 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 4.1e-112 Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 1
BLAST of CSPI07G05800.1 vs. TrEMBL
Match: A0A059ATI9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02631 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22 Identity = 71/151 (47.02%), Postives = 95/151 (62.91%), Query Frame = 1
BLAST of CSPI07G05800.1 vs. TrEMBL
Match: A0A0B2P142_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_047136 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 8.7e-22 Identity = 65/118 (55.08%), Postives = 82/118 (69.49%), Query Frame = 1
BLAST of CSPI07G05800.1 vs. TrEMBL
Match: I1LX64_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G042400 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 8.7e-22 Identity = 65/118 (55.08%), Postives = 82/118 (69.49%), Query Frame = 1
BLAST of CSPI07G05800.1 vs. TrEMBL
Match: C6T1F0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.3e-20 Identity = 75/182 (41.21%), Postives = 102/182 (56.04%), Query Frame = 1
BLAST of CSPI07G05800.1 vs. TAIR10
Match: AT2G14095.1 (AT2G14095.1 unknown protein) HSP 1 Score: 102.8 bits (255), Expect = 2.7e-22 Identity = 65/150 (43.33%), Postives = 93/150 (62.00%), Query Frame = 1
BLAST of CSPI07G05800.1 vs. NCBI nr
Match: gi|778724472|ref|XP_011658811.1| (PREDICTED: uncharacterized protein LOC105436091 [Cucumis sativus]) HSP 1 Score: 412.1 bits (1058), Expect = 5.9e-112 Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 1
BLAST of CSPI07G05800.1 vs. NCBI nr
Match: gi|700188514|gb|KGN43747.1| (hypothetical protein Csa_7G064570 [Cucumis sativus]) HSP 1 Score: 412.1 bits (1058), Expect = 5.9e-112 Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 1
BLAST of CSPI07G05800.1 vs. NCBI nr
Match: gi|659110320|ref|XP_008455165.1| (PREDICTED: uncharacterized protein LOC103495399 [Cucumis melo]) HSP 1 Score: 295.0 bits (754), Expect = 1.0e-76 Identity = 173/214 (80.84%), Postives = 184/214 (85.98%), Query Frame = 1
BLAST of CSPI07G05800.1 vs. NCBI nr
Match: gi|629090703|gb|KCW56956.1| (hypothetical protein EUGRSUZ_I02631 [Eucalyptus grandis]) HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22 Identity = 71/151 (47.02%), Postives = 95/151 (62.91%), Query Frame = 1
BLAST of CSPI07G05800.1 vs. NCBI nr
Match: gi|702468548|ref|XP_010030017.1| (PREDICTED: uncharacterized protein LOC104419888 [Eucalyptus grandis]) HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22 Identity = 71/151 (47.02%), Postives = 95/151 (62.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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