CSPI07G04670.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTACCAAAATCAAAGCAAAGCAAAGCAAAGCGAATACATTCCAAATTGTGGCGCCATAGCCTTCGCGCCAAAACCTTCACTTCCCGCCATTCCTCTTTCTCTCTATATAAACCCTATACCTTCTCTTCCATTTTTCATCCGATACCAATACCAATACCAATTCCATTCGAAGATTTCCCTTTTCCCTTACCCTAAATTCTCTGTCCAGTTCCATCCTCACCATGGTGGTTCCTCTCGGCCCCGGAAAGTTCTACGGCAGCAGCCTCCCTCGTCCCCGCTACTACTCCGACGTTAAGTTCAATGATGAGCGTGTCGATCCACCGACTCCAGTCCTCGATCCACTCCTTTCATGGGCTAACGAGGCTCATTGGTCAATGGGTGGTCTTAGCTTCAATCGCCTCAGGCTTCAAGGTCGGATCGAAGGCAATGTTCACAAACTTCGAACCGAGCGCGAGAAGGTTGCCAAGAAGAAGCTTAAAGCACAAAAACTTGACTCTGCGCCAAAGAGATCTGACCCAGATGCCGGAGCCGATGCCCATCGCCAATTGAAGAAGGCGAGATCTGTAACTCCACCACCGGCACCGATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGACGATATTGGCATGGAAAAGGAAGAGATTGGGGTTGTGAAGAGGAGATTGGTGAAGAAACTGGGAGATGATTTTGATCGGGTGGCTGCAGAGAGTAAGAGGAGTCAATTGAAGGGTTTGAAGGACAGAAGCTCAGAGATCAATGGGGTTAATGAATCTGTAATGAAGATCGTTGAGGAGATTAATAATGAAAATACTAAAGTAAAAAAGACCAACATTGAAAGAAAGGGAAAAACTGGTGGAAATGTCGAGTCTGTATCTGTTTCTGGGTCAAGATCTTCTCCCAGATTGGCTAATAAGCGTGCCTTAAATTGATTTCAGTATATGAGTATAGTGTAGTTTTTTTTAATCTTTTGGTCTCCGATTTTCAAACCTGAGCCAACTCTTGTAATGTTCATTTCTTTCTGTGGAAATATGAAAATGGAATGTATGTCCTTCAATTATCTGATCTTTCTGATGACATTATTAGAAGATTTGTGTTCTGGGTTTTGTTCAATTCATGGGGGGAAACCCAAAGATCTAGCCCCTTTATTAGGATCGGGGAAAAACTCACTTTCTTGGGG ATGGTGGTTCCTCTCGGCCCCGGAAAGTTCTACGGCAGCAGCCTCCCTCGTCCCCGCTACTACTCCGACGTTAAGTTCAATGATGAGCGTGTCGATCCACCGACTCCAGTCCTCGATCCACTCCTTTCATGGGCTAACGAGGCTCATTGGTCAATGGGTGGTCTTAGCTTCAATCGCCTCAGGCTTCAAGGTCGGATCGAAGGCAATGTTCACAAACTTCGAACCGAGCGCGAGAAGGTTGCCAAGAAGAAGCTTAAAGCACAAAAACTTGACTCTGCGCCAAAGAGATCTGACCCAGATGCCGGAGCCGATGCCCATCGCCAATTGAAGAAGGCGAGATCTGTAACTCCACCACCGGCACCGATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGACGATATTGGCATGGAAAAGGAAGAGATTGGGGTTGTGAAGAGGAGATTGGTGAAGAAACTGGGAGATGATTTTGATCGGGTGGCTGCAGAGAGTAAGAGGAGTCAATTGAAGGGTTTGAAGGACAGAAGCTCAGAGATCAATGGGGTTAATGAATCTGTAATGAAGATCGTTGAGGAGATTAATAATGAAAATACTAAAGTAAAAAAGACCAACATTGAAAGAAAGGGAAAAACTGGTGGAAATGTCGAGTCTGTATCTGTTTCTGGGTCAAGATCTTCTCCCAGATTGGCTAATAAGCGTGCCTTAAATTGA ATGGTGGTTCCTCTCGGCCCCGGAAAGTTCTACGGCAGCAGCCTCCCTCGTCCCCGCTACTACTCCGACGTTAAGTTCAATGATGAGCGTGTCGATCCACCGACTCCAGTCCTCGATCCACTCCTTTCATGGGCTAACGAGGCTCATTGGTCAATGGGTGGTCTTAGCTTCAATCGCCTCAGGCTTCAAGGTCGGATCGAAGGCAATGTTCACAAACTTCGAACCGAGCGCGAGAAGGTTGCCAAGAAGAAGCTTAAAGCACAAAAACTTGACTCTGCGCCAAAGAGATCTGACCCAGATGCCGGAGCCGATGCCCATCGCCAATTGAAGAAGGCGAGATCTGTAACTCCACCACCGGCACCGATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGACGATATTGGCATGGAAAAGGAAGAGATTGGGGTTGTGAAGAGGAGATTGGTGAAGAAACTGGGAGATGATTTTGATCGGGTGGCTGCAGAGAGTAAGAGGAGTCAATTGAAGGGTTTGAAGGACAGAAGCTCAGAGATCAATGGGGTTAATGAATCTGTAATGAAGATCGTTGAGGAGATTAATAATGAAAATACTAAAGTAAAAAAGACCAACATTGAAAGAAAGGGAAAAACTGGTGGAAATGTCGAGTCTGTATCTGTTTCTGGGTCAAGATCTTCTCCCAGATTGGCTAATAAGCGTGCCTTAAATTGA
BLAST of CSPI07G04670.1 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 3.8e-127 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1
BLAST of CSPI07G04670.1 vs. TrEMBL
Match: W9R4I2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 5.1e-55 Identity = 140/253 (55.34%), Postives = 170/253 (67.19%), Query Frame = 1
BLAST of CSPI07G04670.1 vs. TrEMBL
Match: B9RVZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.2e-51 Identity = 123/239 (51.46%), Postives = 162/239 (67.78%), Query Frame = 1
BLAST of CSPI07G04670.1 vs. TrEMBL
Match: A0A061EAW7_THECC (Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 2.0e-51 Identity = 131/250 (52.40%), Postives = 162/250 (64.80%), Query Frame = 1
BLAST of CSPI07G04670.1 vs. TrEMBL
Match: A0A0D2SKK6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G201200 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 3.8e-50 Identity = 124/247 (50.20%), Postives = 162/247 (65.59%), Query Frame = 1
BLAST of CSPI07G04670.1 vs. TAIR10
Match: AT4G28310.1 (AT4G28310.1 unknown protein) HSP 1 Score: 159.1 bits (401), Expect = 3.5e-39 Identity = 106/238 (44.54%), Postives = 135/238 (56.72%), Query Frame = 1
BLAST of CSPI07G04670.1 vs. TAIR10
Match: AT1G52270.1 (AT1G52270.1 unknown protein) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07 Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 1
BLAST of CSPI07G04670.1 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus]) HSP 1 Score: 462.2 bits (1188), Expect = 5.5e-127 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1
BLAST of CSPI07G04670.1 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo]) HSP 1 Score: 432.6 bits (1111), Expect = 4.6e-118 Identity = 222/238 (93.28%), Postives = 232/238 (97.48%), Query Frame = 1
BLAST of CSPI07G04670.1 vs. NCBI nr
Match: gi|1009165334|ref|XP_015900977.1| (PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba]) HSP 1 Score: 223.4 bits (568), Expect = 4.3e-55 Identity = 141/265 (53.21%), Postives = 172/265 (64.91%), Query Frame = 1
BLAST of CSPI07G04670.1 vs. NCBI nr
Match: gi|1009129728|ref|XP_015881923.1| (PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba]) HSP 1 Score: 223.4 bits (568), Expect = 4.3e-55 Identity = 142/265 (53.58%), Postives = 171/265 (64.53%), Query Frame = 1
BLAST of CSPI07G04670.1 vs. NCBI nr
Match: gi|703073457|ref|XP_010089552.1| (hypothetical protein L484_004788 [Morus notabilis]) HSP 1 Score: 222.6 bits (566), Expect = 7.3e-55 Identity = 140/253 (55.34%), Postives = 170/253 (67.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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