CSPI06G27310.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G27310.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Stress enhanced protein 2
Location	Chr6 : 24018552 .. 24019790 (-)
Sequence length	693

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTGCAAAATTATGTAATTATTATTAGTAACTTAGATTACAAAAATGTGTATGAAATAAAGTAAAAGAAAGAAATAAAAATTGAAAAGAGCGTTAGCGTACAAAAAATAGGCCACGTAACATGCTTCAATCACCTCTTACGTGTACGCAATTCTTTCTCATTTCTTCTATTTCACTGTTCATATTCTTCCAAAGAAATTCTCTCCAATCTTCTTCCATGGCTGCGTCGCCACGCTCCCTTCGCTACCAATTCCGCTCCTCCTTGCCCGACGTTCCCCCGCGATCGCCGTCTCTTTCCGTTTCTTTTCCCAAACTTAAGCCTGCGGATTCGGAAACTACCTCGAAGATTGTTCTACAGCCTCGTTTATGCACTCTCAGATCCTTCGGATCCGATCCGCTCGTTCCTATCAAGTCTAAGAGAGTATCCACTCGAGACGATGCTACAAACGACGACGTTTCTCCGTTCTTTGCGACTCTGTCGGAGTACATAGAGAGTTCGAAGGACAGCCATGAATTCGAGATCATTTCCGGCCGCCTCGCTATGGTGAGTTTCATGTTTCGAGTCTTGATCTACCTAATGAAACTTTGATTTTCGTATAATTCGAGAAATTAGGGTTTAGAAATAGCTGAATTGATTGAACTCGAAAAAGATAGTTGAAACTACTGTTGCGAGGCGATTTCTTCCTTTATTATAGTCCAATTCTTTGTAGATTGTGTTTGCGGCGACTGTAGCAATGGAGGTAGTCACCGGAAATTCAGTATTCAGAAAGATGGATCTGGAAGGGATTGAGGAAGGATTAGGAGTATGTTTGGGCGCCGTTACTCTGGCGACCATTTTTGCGTTCTCCTCCAACGCTCGAAACAGAGTAGGTCGAATCTTCAGCATCAGCTGCACTACCTTCATCGATTCGCTTATTGACCAGATCGTCGACGGTCTTTTCTACGAAAACGACACCGGCGATTGGTCCGACGACATTTGAATGCGGAGCGTTGGAAACAGAGGTACGTAAGTAATGTGTATATATAAATTATTAAATTCGAGTGGAATTGAAACACATTCAATTCAACAGTGTAAGTAATTTATGCATACACATATATAGAAGAACTTCATCTGAATTGAGAAAGAATCTGAAATAGTTAAAGGGTTGAGTAATTTTGATTTTGTTTAGTTATTCTAAGCCCAACTATTTCATGATTGAAGAAGTTCCACTTATTTTTAGGTAAAATTTAGAGAAGAT

mRNA sequence

ATGCTTCAATCACCTCTTACGTGTACGCAATTCTTTCTCATTTCTTCTATTTCACTGTTCATATTCTTCCAAAGAAATTCTCTCCAATCTTCTTCCATGGCTGCGTCGCCACGCTCCCTTCGCTACCAATTCCGCTCCTCCTTGCCCGACGTTCCCCCGCGATCGCCGTCTCTTTCCGTTTCTTTTCCCAAACTTAAGCCTGCGGATTCGGAAACTACCTCGAAGATTGTTCTACAGCCTCGTTTATGCACTCTCAGATCCTTCGGATCCGATCCGCTCGTTCCTATCAAGTCTAAGAGAGTATCCACTCGAGACGATGCTACAAACGACGACGTTTCTCCGTTCTTTGCGACTCTGTCGGAGTACATAGAGAGTTCGAAGGACAGCCATGAATTCGAGATCATTTCCGGCCGCCTCGCTATGATTGTGTTTGCGGCGACTGTAGCAATGGAGGTAGTCACCGGAAATTCAGTATTCAGAAAGATGGATCTGGAAGGGATTGAGGAAGGATTAGGAGTATGTTTGGGCGCCGTTACTCTGGCGACCATTTTTGCGTTCTCCTCCAACGCTCGAAACAGAGTAGGTCGAATCTTCAGCATCAGCTGCACTACCTTCATCGATTCGCTTATTGACCAGATCGTCGACGGTCTTTTCTACGAAAACGACACCGGCGATTGGTCCGACGACATTTGA

Coding sequence (CDS)

ATGCTTCAATCACCTCTTACGTGTACGCAATTCTTTCTCATTTCTTCTATTTCACTGTTCATATTCTTCCAAAGAAATTCTCTCCAATCTTCTTCCATGGCTGCGTCGCCACGCTCCCTTCGCTACCAATTCCGCTCCTCCTTGCCCGACGTTCCCCCGCGATCGCCGTCTCTTTCCGTTTCTTTTCCCAAACTTAAGCCTGCGGATTCGGAAACTACCTCGAAGATTGTTCTACAGCCTCGTTTATGCACTCTCAGATCCTTCGGATCCGATCCGCTCGTTCCTATCAAGTCTAAGAGAGTATCCACTCGAGACGATGCTACAAACGACGACGTTTCTCCGTTCTTTGCGACTCTGTCGGAGTACATAGAGAGTTCGAAGGACAGCCATGAATTCGAGATCATTTCCGGCCGCCTCGCTATGATTGTGTTTGCGGCGACTGTAGCAATGGAGGTAGTCACCGGAAATTCAGTATTCAGAAAGATGGATCTGGAAGGGATTGAGGAAGGATTAGGAGTATGTTTGGGCGCCGTTACTCTGGCGACCATTTTTGCGTTCTCCTCCAACGCTCGAAACAGAGTAGGTCGAATCTTCAGCATCAGCTGCACTACCTTCATCGATTCGCTTATTGACCAGATCGTCGACGGTCTTTTCTACGAAAACGACACCGGCGATTGGTCCGACGACATTTGA

Homology

[Close]

BLAST of CSPI06G27310.1 vs. Swiss-Prot
Match: STEP2_ARATH (Stress enhanced protein 2, chloroplastic OS=Arabidopsis thaliana GN=SEP2 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-46
Identity = 105/206 (50.97%), Postives = 137/206 (66.50%), Query Frame = 1


Query: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFP--------KLKPADSETTSKIVLQPRLCT 92
           MA + R++RYQ    LP    R+P    S P        + +  D     KIVLQPRLCT
Sbjct: 1   MAMATRAIRYQ----LPSPRFRAPRCESSEPIKQIQIQQRPRGGDLAENGKIVLQPRLCT 60

Query: 93  LRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVF 152
           LRS+GSD ++  K         +  +  SPFF TL++YIESSK S +FE ISGRLAMIVF
Sbjct: 61  LRSYGSDMVIAKKDGGDGGGGGSDVELASPFFETLTDYIESSKKSQDFETISGRLAMIVF 120

Query: 153 AATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTT 212
           A TV  E+VTGNS+F+K+D+EG+ E +G  L A+  A +FA+ + +RNRVGRIF++SC +
Sbjct: 121 AVTVTEEIVTGNSLFKKLDVEGLSEAIGAGLAAMGCAAMFAWLTISRNRVGRIFTVSCNS 180

Query: 213 FIDSLIDQIVDGLFYENDTGDWSDDI 231
           FIDSL+DQIVDGLFY+    DWSDD+
Sbjct: 181 FIDSLVDQIVDGLFYDTKPSDWSDDL 202

[Close]

BLAST of CSPI06G27310.1 vs. TrEMBL
Match: A0A0A0KI08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487600 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 5.6e-120
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 1   MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV 60
           MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV
Sbjct: 1   MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV 60

Query: 61  SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS 120
           SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS
Sbjct: 61  SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS 120

Query: 121 EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL 180
           EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL
Sbjct: 121 EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL 180

Query: 181 ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI 231
           ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI
Sbjct: 181 ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI 230

[Close]

BLAST of CSPI06G27310.1 vs. TrEMBL
Match: A0A151QWU1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_044293 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 8.8e-57
Identity = 130/200 (65.00%), Postives = 149/200 (74.50%), Query Frame = 1


Query: 33  MAASPRSLRYQFRSSLPDVPPRSPS--LSVSFPKLKPADSE-TTSKIVLQPRLCTLRSFG 92
           MA+  R  R + R     V PR P   + VS PK K A++E T + IVLQPRLCTLRS+G
Sbjct: 1   MASVTRVARCELRPGRAAVRPREPGGPVPVSIPKPKAAEAEGTNANIVLQPRLCTLRSYG 60

Query: 93  SDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVA 152
           SD    IKS+          DDVSPFFATLSEYIESSK SH+FEIISGRLAM+VFAATV 
Sbjct: 61  SDRGGVIKSR----------DDVSPFFATLSEYIESSKKSHDFEIISGRLAMMVFAATVT 120

Query: 153 MEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSL 212
           ME+VTGNSVFRKMD+EGI E  GVCLGAVT A +FA+ S+ARNRVGRIF++SC  FIDS+
Sbjct: 121 MEMVTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFSSARNRVGRIFTVSCNAFIDSV 180

Query: 213 IDQIVDGLFYENDTGDWSDD 230
           IDQIVDGLFYE D   WSD+
Sbjct: 181 IDQIVDGLFYEGDPTHWSDE 190

[Close]

BLAST of CSPI06G27310.1 vs. TrEMBL
Match: I1KT92_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G141300 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.5e-56
Identity = 124/200 (62.00%), Postives = 151/200 (75.50%), Query Frame = 1


Query: 33  MAASPRSLRYQFRSSLPDVPPRSPS--LSVSFPKLKPADSETT-SKIVLQPRLCTLRSFG 92
           MA++ R +  + RS+ P V PR P+  + V+ PK KP  +E   + IVLQPRLCTLRS+G
Sbjct: 1   MASATRLVHCELRSARPAVRPREPAGPVQVTIPKPKPKAAEAEGANIVLQPRLCTLRSYG 60

Query: 93  SDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVA 152
           SD    +    + TR +  +DDVSPFFA LS+YIESSK S +FEIISGRLAM+VFAATV 
Sbjct: 61  SDRAGVL----IKTRKEGDHDDVSPFFAALSDYIESSKKSQDFEIISGRLAMMVFAATVT 120

Query: 153 MEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSL 212
           MEVVTGNSVFRKMD+EGI E  GVCLGAVT A +FA+  +ARNRVGRIF++SC  FIDS+
Sbjct: 121 MEVVTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFCSARNRVGRIFTVSCNAFIDSV 180

Query: 213 IDQIVDGLFYENDTGDWSDD 230
           IDQI+DGLFYE D  DW D+
Sbjct: 181 IDQIIDGLFYEGDPTDWPDE 196

[Close]

BLAST of CSPI06G27310.1 vs. TrEMBL
Match: A0A0B2RAE6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_008444 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.5e-56
Identity = 124/200 (62.00%), Postives = 151/200 (75.50%), Query Frame = 1


Query: 33  MAASPRSLRYQFRSSLPDVPPRSPS--LSVSFPKLKPADSETT-SKIVLQPRLCTLRSFG 92
           MA++ R +  + RS+ P V PR P+  + V+ PK KP  +E   + IVLQPRLCTLRS+G
Sbjct: 1   MASATRLVHCELRSARPAVRPREPAGPVQVTIPKPKPKAAEAEGANIVLQPRLCTLRSYG 60

Query: 93  SDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVA 152
           SD    +    + TR +  +DDVSPFFA LS+YIESSK S +FEIISGRLAM+VFAATV 
Sbjct: 61  SDRAGVL----IKTRKEGDHDDVSPFFAALSDYIESSKKSQDFEIISGRLAMMVFAATVT 120

Query: 153 MEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSL 212
           MEVVTGNSVFRKMD+EGI E  GVCLGAVT A +FA+  +ARNRVGRIF++SC  FIDS+
Sbjct: 121 MEVVTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFCSARNRVGRIFTVSCNAFIDSV 180

Query: 213 IDQIVDGLFYENDTGDWSDD 230
           IDQI+DGLFYE D  DW D+
Sbjct: 181 IDQIIDGLFYEGDPTDWPDE 196

[Close]

BLAST of CSPI06G27310.1 vs. TrEMBL
Match: A0A067KTV2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09398 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.4e-56
Identity = 126/200 (63.00%), Postives = 148/200 (74.00%), Query Frame = 1


Query: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFP--KLKPADSETTSKIVLQPRLCTLRSFGS 92
           MA   R++  Q     P V  R  ++SV  P  K+K  ++E T KI+LQPRLCTLRS+G 
Sbjct: 1   MARVARAIHCQLNVEKPAVLRRDSAVSVQAPAPKIKQGETENT-KIMLQPRLCTLRSYGE 60

Query: 93  DPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVAM 152
           D    +K KR         D+VSPFF TLS+YIESSK SH+FEIISGRLAMIVFA TVA 
Sbjct: 61  DRFGVVKMKRDG------GDEVSPFFDTLSDYIESSKKSHDFEIISGRLAMIVFAVTVAT 120

Query: 153 EVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSLI 212
           EVVTGNSVFRKMDL+GI E  G+CLGAVT A +FA+ S+ARNRVGRIF+ SC TFIDSLI
Sbjct: 121 EVVTGNSVFRKMDLQGIAEAAGICLGAVTSAAVFAWFSSARNRVGRIFTSSCNTFIDSLI 180

Query: 213 DQIVDGLFYENDTGDWSDDI 231
           D+IVDGLFYE++  DWSDDI
Sbjct: 181 DEIVDGLFYESELSDWSDDI 193

[Close]

BLAST of CSPI06G27310.1 vs. TAIR10
Match: AT2G21970.1 (AT2G21970.1 stress enhanced protein 2)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-47
Identity = 105/206 (50.97%), Postives = 137/206 (66.50%), Query Frame = 1


Query: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFP--------KLKPADSETTSKIVLQPRLCT 92
           MA + R++RYQ    LP    R+P    S P        + +  D     KIVLQPRLCT
Sbjct: 1   MAMATRAIRYQ----LPSPRFRAPRCESSEPIKQIQIQQRPRGGDLAENGKIVLQPRLCT 60

Query: 93  LRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVF 152
           LRS+GSD ++  K         +  +  SPFF TL++YIESSK S +FE ISGRLAMIVF
Sbjct: 61  LRSYGSDMVIAKKDGGDGGGGGSDVELASPFFETLTDYIESSKKSQDFETISGRLAMIVF 120

Query: 153 AATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTT 212
           A TV  E+VTGNS+F+K+D+EG+ E +G  L A+  A +FA+ + +RNRVGRIF++SC +
Sbjct: 121 AVTVTEEIVTGNSLFKKLDVEGLSEAIGAGLAAMGCAAMFAWLTISRNRVGRIFTVSCNS 180

Query: 213 FIDSLIDQIVDGLFYENDTGDWSDDI 231
           FIDSL+DQIVDGLFY+    DWSDD+
Sbjct: 181 FIDSLVDQIVDGLFYDTKPSDWSDDL 202

[Close]

BLAST of CSPI06G27310.1 vs. NCBI nr
Match: gi|449448410|ref|XP_004141959.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 438.3 bits (1126), Expect = 8.1e-120
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 1   MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV 60
           MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV
Sbjct: 1   MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV 60

Query: 61  SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS 120
           SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS
Sbjct: 61  SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS 120

Query: 121 EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL 180
           EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL
Sbjct: 121 EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL 180

Query: 181 ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI 231
           ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI
Sbjct: 181 ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI 230

[Close]

BLAST of CSPI06G27310.1 vs. NCBI nr
Match: gi|659079234|ref|XP_008440147.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 357.8 bits (917), Expect = 1.4e-95
Identity = 184/197 (93.40%), Postives = 188/197 (95.43%), Query Frame = 1


Query: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFPKLKPADSETTSKIVLQPRLCTLRSFGSDP 92
           MAA PRS+ YQFRSSLPDVPPRSPSLSVS PKLKPADSETT KIVLQPRLCTLRSFGSDP
Sbjct: 1   MAAPPRSVHYQFRSSLPDVPPRSPSLSVSLPKLKPADSETTPKIVLQPRLCTLRSFGSDP 60

Query: 93  LVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVAMEV 152
           LVPIK+KRVSTRDDA+ND+VSPFF TLSEYIESSKDSHEFEIISGRLAMIVFAATV MEV
Sbjct: 61  LVPIKTKRVSTRDDASNDEVSPFFVTLSEYIESSKDSHEFEIISGRLAMIVFAATVTMEV 120

Query: 153 VTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSLIDQ 212
           VTGNSVFRKMDLEGIEE LGVCLGAVTLA IFAFSSNARNRVGRIFSISC TFIDSLIDQ
Sbjct: 121 VTGNSVFRKMDLEGIEEALGVCLGAVTLAAIFAFSSNARNRVGRIFSISCNTFIDSLIDQ 180

Query: 213 IVDGLFYENDTGDWSDD 230
           IVDGLFYENDTGDWSDD
Sbjct: 181 IVDGLFYENDTGDWSDD 197

[Close]

BLAST of CSPI06G27310.1 vs. NCBI nr
Match: gi|1012322405|gb|KYP34719.1| (hypothetical protein KK1_044293 [Cajanus cajan])

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-56
Identity = 130/200 (65.00%), Postives = 149/200 (74.50%), Query Frame = 1


Query: 33  MAASPRSLRYQFRSSLPDVPPRSPS--LSVSFPKLKPADSE-TTSKIVLQPRLCTLRSFG 92
           MA+  R  R + R     V PR P   + VS PK K A++E T + IVLQPRLCTLRS+G
Sbjct: 1   MASVTRVARCELRPGRAAVRPREPGGPVPVSIPKPKAAEAEGTNANIVLQPRLCTLRSYG 60

Query: 93  SDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVA 152
           SD    IKS+          DDVSPFFATLSEYIESSK SH+FEIISGRLAM+VFAATV 
Sbjct: 61  SDRGGVIKSR----------DDVSPFFATLSEYIESSKKSHDFEIISGRLAMMVFAATVT 120

Query: 153 MEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSL 212
           ME+VTGNSVFRKMD+EGI E  GVCLGAVT A +FA+ S+ARNRVGRIF++SC  FIDS+
Sbjct: 121 MEMVTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFSSARNRVGRIFTVSCNAFIDSV 180

Query: 213 IDQIVDGLFYENDTGDWSDD 230
           IDQIVDGLFYE D   WSD+
Sbjct: 181 IDQIVDGLFYEGDPTHWSDE 190

[Close]

BLAST of CSPI06G27310.1 vs. NCBI nr
Match: gi|356525533|ref|XP_003531379.1| (PREDICTED: stress enhanced protein 2, chloroplastic-like [Glycine max])

HSP 1 Score: 227.6 bits (579), Expect = 2.2e-56
Identity = 124/200 (62.00%), Postives = 151/200 (75.50%), Query Frame = 1


Query: 33  MAASPRSLRYQFRSSLPDVPPRSPS--LSVSFPKLKPADSETT-SKIVLQPRLCTLRSFG 92
           MA++ R +  + RS+ P V PR P+  + V+ PK KP  +E   + IVLQPRLCTLRS+G
Sbjct: 1   MASATRLVHCELRSARPAVRPREPAGPVQVTIPKPKPKAAEAEGANIVLQPRLCTLRSYG 60

Query: 93  SDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVA 152
           SD    +    + TR +  +DDVSPFFA LS+YIESSK S +FEIISGRLAM+VFAATV 
Sbjct: 61  SDRAGVL----IKTRKEGDHDDVSPFFAALSDYIESSKKSQDFEIISGRLAMMVFAATVT 120

Query: 153 MEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSL 212
           MEVVTGNSVFRKMD+EGI E  GVCLGAVT A +FA+  +ARNRVGRIF++SC  FIDS+
Sbjct: 121 MEVVTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFCSARNRVGRIFTVSCNAFIDSV 180

Query: 213 IDQIVDGLFYENDTGDWSDD 230
           IDQI+DGLFYE D  DW D+
Sbjct: 181 IDQIIDGLFYEGDPTDWPDE 196

[Close]

BLAST of CSPI06G27310.1 vs. NCBI nr
Match: gi|802615505|ref|XP_012075221.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Jatropha curcas])

HSP 1 Score: 226.1 bits (575), Expect = 6.3e-56
Identity = 126/200 (63.00%), Postives = 148/200 (74.00%), Query Frame = 1


Query: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFP--KLKPADSETTSKIVLQPRLCTLRSFGS 92
           MA   R++  Q     P V  R  ++SV  P  K+K  ++E T KI+LQPRLCTLRS+G 
Sbjct: 1   MARVARAIHCQLNVEKPAVLRRDSAVSVQAPAPKIKQGETENT-KIMLQPRLCTLRSYGE 60

Query: 93  DPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVAM 152
           D    +K KR         D+VSPFF TLS+YIESSK SH+FEIISGRLAMIVFA TVA 
Sbjct: 61  DRFGVVKMKRDG------GDEVSPFFDTLSDYIESSKKSHDFEIISGRLAMIVFAVTVAT 120

Query: 153 EVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSLI 212
           EVVTGNSVFRKMDL+GI E  G+CLGAVT A +FA+ S+ARNRVGRIF+ SC TFIDSLI
Sbjct: 121 EVVTGNSVFRKMDLQGIAEAAGICLGAVTSAAVFAWFSSARNRVGRIFTSSCNTFIDSLI 180

Query: 213 DQIVDGLFYENDTGDWSDDI 231
           D+IVDGLFYE++  DWSDDI
Sbjct: 181 DEIVDGLFYESELSDWSDDI 193

The following BLAST results are available for this feature:

BLAST of CSPI06G27310.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
STEP2_ARATH	2.0e-46	50.97	Stress enhanced protein 2, chloroplastic OS=Arabidopsis thaliana GN=SEP2 PE=2 SV...	[more]

BLAST of CSPI06G27310.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI08_CUCSA	5.6e-120	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487600 PE=4 SV=1	[more]
A0A151QWU1_CAJCA	8.8e-57	65.00	Uncharacterized protein OS=Cajanus cajan GN=KK1_044293 PE=4 SV=1	[more]
I1KT92_SOYBN	1.5e-56	62.00	Uncharacterized protein OS=Glycine max GN=GLYMA_08G141300 PE=4 SV=1	[more]
A0A0B2RAE6_GLYSO	1.5e-56	62.00	Uncharacterized protein OS=Glycine soja GN=glysoja_008444 PE=4 SV=1	[more]
A0A067KTV2_JATCU	4.4e-56	63.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09398 PE=4 SV=1	[more]

BLAST of CSPI06G27310.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21970.1	1.1e-47	50.97	stress enhanced protein 2	[more]

BLAST of CSPI06G27310.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448410\|ref\|XP_004141959.1\|	8.1e-120	100.00	PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis sativus]	[more]
gi\|659079234\|ref\|XP_008440147.1\|	1.4e-95	93.40	PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis melo]	[more]
gi\|1012322405\|gb\|KYP34719.1\|	1.3e-56	65.00	hypothetical protein KK1_044293 [Cajanus cajan]	[more]
gi\|356525533\|ref\|XP_003531379.1\|	2.2e-56	62.00	PREDICTED: stress enhanced protein 2, chloroplastic-like [Glycine max]	[more]
gi\|802615505\|ref\|XP_012075221.1\|	6.3e-56	63.00	PREDICTED: stress enhanced protein 2, chloroplastic [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G27310	CSPI06G27310	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G27310.1	CSPI06G27310.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G27310.1.utr3p1	CSPI06G27310.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G27310.1.cds2	CSPI06G27310.1.cds2	CDS
CSPI06G27310.1.cds1	CSPI06G27310.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G27310.1.utr5p1	CSPI06G27310.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 118..160 score: 1.9
None	No IPR available	PANTHER	PTHR36490	FAMILY NOT NAMED	coord: 33..230 score: 1.1