CSPI04G12510.2 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTCCTTCCTTCCTTCCTTCCTTCCTTGCTTGGAAATGCTTTCATTATTACATCTAATCCCCTTGAGTGTGAGCAGTGAAGAATTTTGATGTTCAACACCATGTCTTTAGCTCCTCCTTATCTCTATTCTTCACACTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCTACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTATGAAGAGTATGAAGTGGAGCTGGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCACCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACTGTTGGTGATAAAGTTCTTGCTACCAGGTTCCTCTCAATTCAACTTCTTCCCTCATCAATAACTATTTATTTCCTACGCTTAGCATTTTGTATTCTCAAATAAAAAACTGTAGGATGTGCTTGTGTCCATTACCTGCGACTTTTCAAAACGGTGTATGCAGGGTCAATGCATAACATTTTCTTTAAACACCGTCCCTAAATCTTTATTCGTGGCGCCTGGATGACCCGAGATAAAGTGGTCACCATCTCCGTTATATTAAACTTATGCGCTTTCGTTGCTATGTTCAAAATCACATATGAGACTAAAAGCTTATTTTGCAACATTCATCACTTACGACGTTGAAATTATCACAATCTAGATCGGTTACAATAATACAACATGCAACTCATATCCTTGACACTAAAGACAAAGATGAACAATGCTTCAAAATTGGATTCTTGTTGATTTGTGTATTCATCCTAATGGAAGTAAAATGGAGCTTCCACAGGTTAGGACTTTAATTGACCCAACTGTTTTAACGAAGGGTGAATTATAATGCCGTGTGCTCATAACTTCTGTCTTCTTCTTGTTGTTGCGTGGTGTATTTTTGTTTCAAAAGAAAGTTAAAAGAAGAAAAGAAAAAGAAAAGAACTAGTTTGCATGATTTCTACATATCTCCAAACAAACGTGGCATAGCCTAGAATGAAAATGTGTGACGAAAAATCCTAGCAGAAACATTTGCAGCTTTTCTTCCATGGTTGGAATATGATAAACAAAATCGTTTCATCTATGCAGTGCAGTATTTGGGACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCATTACTCATGAAAATGCAGAAGAGATATGGTTAGTTATCAATCACACTCAACACATGAATAACCCATAACAAATGAAAATGAAGGATGATCAGATTTCTTATCTTAAATTGGCTGATGACTTGTATATATCTTAGTTCACTAAAAGACATAATACTCTTAACATCCTTTACAAATTGTTTGTGATTGTTTTTTCAGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAAGTAAGTGAATGTTTTCTAAGCTAATAGTATCCTATTGAGGCAAGTAACATCTCCCTTCTCTTTCCTCATTTTTCTAAGCTTGGCAAGTAAGTACCATGCAATACTTCGCAGTTAGCAGAATGTCAGTAGGGACTTGTCTGGAAAATATGATCTGCAAAACATTGATTTAGCATTTAAAATAAATCTCTGCTATATTGTTAACATATTATAGGTCTAATTGTTGTTACAGTTGCAAAATGCCTTGAGAATGAAGGAGCAGAAAGCACGCAGAGAAAACGACCTACGCCAAGGACTGCGTCTCTATAAGTATGTGTTGTATATCCAACTTATCCGCTCCCCGTATTGTTTACTTTTGAAGTGCAGACACATCAATGCCCCAACTCCTACTTTCTTTCTGTTTTTTCCCCTCAAGGAATGCTAAATATGAGGAAGCATTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTCCAGACGAAGCTTCGGTTGCTAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGGTAATGCTTTTGCTTTAATGTGGAATTTGTTGCAACAAAATCTAAAATTGCAATCTGAAACTTCGGCTTAGATTGGGGTTGATGTAAATTATAAAATAATTGTTGCCAATATTTTATTTAGAAAAGTCATTTGTGAGATGAAATAAAAACAGTATTTGACTAAACTACAAATTTAAATTAGAAAGAAATAATAGAATTTAGCAAATGAATATTAGGTTAGTGAGATTTAGCTACAAGCCTTATTATTTCAAAGTACGCAATCCCATGACTAGTTTACCATAATTTGTGTAGACCCATTTGTTTGTTTACGTTTCAATCTTCCTAGACAAAATCGCACAAAATGGGAATAACTGATCAGTGCCCCTATATAAATGCTCAAACAGTTAAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGAAGCAGGATTTGAAGACTTTAAGGTAACAACCACTTCAAGTTTTGATATTCAGATAATATTACTTGCATTGGGTAATTTGGGTGGAAGTTGTGAAAGTATTACTCTGTATGTTTGCCAGAGAGTTCGGACGGATCCTGATCTATCAAACATAAGGACATTAGAGGAATTTGAGCCTCTTGTGAAAAGGTTTGACGAATCATTTATCAATGAGAATGCCATCAATGCCATTAAGTCGCTATTCGGCTTCAAAACATGAAACCAGACTCTTCTACATTTAATTGTTTATTAAACAATTCACATTCTTGTTGTCACAACTTGTATATAAGTATCCTGAGCTTCTAGCTTTTCGACGAGTAACAAAAGAATTTCAAGGGAATTTGTTCCCATAAAAAAAAAAAAAAAAAAAAGAAGATTACATATGCATATTGGCGATTCTATACACAGTATAGCTACGTTGAAGAGACCTGTTTGTGTTCAATTAATTCCAAAATAGCCAGTTTCTCTATCCGGAAGCTGAAACTTGATTTTAAGTTTAGGTTATGAAAGTTAATGTTAAACCTTCGGCAACTAAAAAACCCCAACCAAAATCAAAGTCAGTTTGAGAATTGTTTGATTTTCCAGTTTCAGTAAGTTGGTCGTGAAGCGTTCTAGCATCCATGAGGGGTGCAAGTTTGGGGTATGGTCAATTATATGTTTTGTTTGTTGATTATGTATCGTCACTCCTTACCTTGTCTATGACCCATTTTGCCCCAACCTACAACCCCAGCACTTGGCTTATAATCAAGGCAAATCGGTTTGATCAAATCAACTATCAGTTTGGAGCAGTTTGATTGTATTTCTTCGGCGGTTTTGTTTCAATTTTTGTTATTCTATATATACACACACAGACAGTTCAGTTTCGGTTAGAGAGCCAAACCTAACTGCTTACACTCCTTAGAAAGGTAAAGATTCATGTACTATCCCTGGCTATATTTGGACTTCTTTTCCGCAAAACATCCGTAATCCACGACTAAAGAAGAAAAGAACTGCTAAGAAGTAAATTCTGAGGAGGTGAAATGCAAACTTGCTTCATTGCCTATCAGATAGGGTACTCGAAGTCCTATTCATCCACCCCCAATCATCCAGGGCTTTTGAATTACAAAAGGAAATTCATAATCATACATTAATTTTATTATTTCAAAATCTCAATCCAATCCGCAAAACTGAAGTGCCCTTTTACGGCAATAAATGGATGACAGAAATGGACGGCAAGCCTCAAATAGCCATCCAGTAGCATAAATTTGAACTTAAGCCATCTAACTGATCCTACTGCCCAACAAAACCTGGAATTTAGGAACAAACCTTGAGCCTCTCATGTCAATCGTCCTGAAATTACTGCTGACTTTTAAGCACAGGAAAAGCAATTACATCTCGAATGCTTGCAGAGTTTGTCAGAAGCATCACTAATCTATCAATTCCAATTCCCTGAAAGTTAAATTCTTTAATCAGTTACAGCGAGGAAAGGGGATACTAAACATCCAAGTACAACGAAACATCCATCATGTGTTCCACAATTTAATTATAGATCAAATACCAGCCCCAGATTCGGTAATTTTGTATGCACTTGAAAATTTTAGACTACTCAGCTTGCACATTGGAGACTTCAGCAGCTGGTTTTTAAATGTTTTGCATGTGGAAAAACTTCAGAGCAGCTATGAAATAGCTATTCAAGATACTTTTATTGGCCACTTTCTAATCTATTTTTTCTGTGATTTTATTATGTCAAAAGAATGGAGTGATCTAGAGTTTCACTAGCAGTGCATCAAGG ATGTTCAACACCATGTCTTTAGCTCCTCCTTATCTCTATTCTTCACACTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCTACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTATGAAGAGTATGAAGTGGAGCTGGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCACCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACTGTTGGTGATAAAGTTCTTGCTACCAGTGCAGTATTTGGGACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCATTACTCATGAAAATGCAGAAGAGATATGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAATTGCAAAATGCCTTGAGAATGAAGGAGCAGAAAGCACGCAGAGAAAACGACCTACGCCAAGGACTGCGTCTCTATAAGAATGCTAAATATGAGGAAGCATTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTCCAGACGAAGCTTCGGTTGCTAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGTTAAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGAAGCAGGATTTGAAGACTTTAAGGTAACAACCACTTCAAGTTTTGATATTCAGATAATATTACTTGCATTGGGTAATTTGGGTGGAAGTTGTGAAAGTATTACTCTGTATGTTTGCCAGAGAGTTCGGACGGATCCTGATCTATCAAACATAAGGACATTAGAGGAATTTGAGCCTCTTGTGAAAAGGTTTGACGAATCATTTATCAATGAGAATGCCATCAATGCCATTAAGTCGCTATTCGGCTTCAAAACATGA ATGTTCAACACCATGTCTTTAGCTCCTCCTTATCTCTATTCTTCACACTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCTACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTATGAAGAGTATGAAGTGGAGCTGGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCACCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACTGTTGGTGATAAAGTTCTTGCTACCAGTGCAGTATTTGGGACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCATTACTCATGAAAATGCAGAAGAGATATGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAATTGCAAAATGCCTTGAGAATGAAGGAGCAGAAAGCACGCAGAGAAAACGACCTACGCCAAGGACTGCGTCTCTATAAGAATGCTAAATATGAGGAAGCATTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTCCAGACGAAGCTTCGGTTGCTAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGTTAAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGAAGCAGGATTTGAAGACTTTAAGGTAACAACCACTTCAAGTTTTGATATTCAGATAATATTACTTGCATTGGGTAATTTGGGTGGAAGTTGTGAAAGTATTACTCTGTATGTTTGCCAGAGAGTTCGGACGGATCCTGATCTATCAAACATAAGGACATTAGAGGAATTTGAGCCTCTTGTGAAAAGGTTTGACGAATCATTTATCAATGAGAATGCCATCAATGCCATTAAGTCGCTATTCGGCTTCAAAACATGA
BLAST of CSPI04G12510.2 vs. TrEMBL
Match: A0A0A0KWR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268040 PE=4 SV=1) HSP 1 Score: 641.3 bits (1653), Expect = 7.0e-181 Identity = 337/369 (91.33%), Postives = 337/369 (91.33%), Query Frame = 1
BLAST of CSPI04G12510.2 vs. TrEMBL
Match: A0A067K3A5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16187 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 1.4e-120 Identity = 245/367 (66.76%), Postives = 278/367 (75.75%), Query Frame = 1
BLAST of CSPI04G12510.2 vs. TrEMBL
Match: B9SBN8_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0342940 PE=4 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 7.1e-117 Identity = 241/368 (65.49%), Postives = 274/368 (74.46%), Query Frame = 1
BLAST of CSPI04G12510.2 vs. TrEMBL
Match: B9GXY1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s20890g PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 7.9e-116 Identity = 244/379 (64.38%), Postives = 276/379 (72.82%), Query Frame = 1
BLAST of CSPI04G12510.2 vs. TrEMBL
Match: A0A059AE18_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01758 PE=4 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 3.7e-113 Identity = 229/360 (63.61%), Postives = 267/360 (74.17%), Query Frame = 1
BLAST of CSPI04G12510.2 vs. TAIR10
Match: AT1G55480.1 (AT1G55480.1 protein containing PDZ domain, a K-box domain, and a TPR region) HSP 1 Score: 395.6 bits (1015), Expect = 3.4e-110 Identity = 224/370 (60.54%), Postives = 267/370 (72.16%), Query Frame = 1
BLAST of CSPI04G12510.2 vs. TAIR10
Match: AT5G17170.1 (AT5G17170.1 rubredoxin family protein) HSP 1 Score: 55.1 bits (131), Expect = 1.1e-07 Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 1
BLAST of CSPI04G12510.2 vs. NCBI nr
Match: gi|449463844|ref|XP_004149641.1| (PREDICTED: uncharacterized protein LOC101217229 [Cucumis sativus]) HSP 1 Score: 641.3 bits (1653), Expect = 1.0e-180 Identity = 337/369 (91.33%), Postives = 337/369 (91.33%), Query Frame = 1
BLAST of CSPI04G12510.2 vs. NCBI nr
Match: gi|659097949|ref|XP_008449894.1| (PREDICTED: uncharacterized protein LOC103491636 [Cucumis melo]) HSP 1 Score: 615.5 bits (1586), Expect = 5.9e-173 Identity = 327/369 (88.62%), Postives = 329/369 (89.16%), Query Frame = 1
BLAST of CSPI04G12510.2 vs. NCBI nr
Match: gi|802659250|ref|XP_012080818.1| (PREDICTED: uncharacterized protein LOC105640994 [Jatropha curcas]) HSP 1 Score: 441.0 bits (1133), Expect = 2.0e-120 Identity = 245/367 (66.76%), Postives = 278/367 (75.75%), Query Frame = 1
BLAST of CSPI04G12510.2 vs. NCBI nr
Match: gi|255564826|ref|XP_002523407.1| (PREDICTED: uncharacterized protein LOC8282165 [Ricinus communis]) HSP 1 Score: 428.7 bits (1101), Expect = 1.0e-116 Identity = 241/368 (65.49%), Postives = 274/368 (74.46%), Query Frame = 1
BLAST of CSPI04G12510.2 vs. NCBI nr
Match: gi|743835876|ref|XP_011025128.1| (PREDICTED: uncharacterized protein LOC105126081 [Populus euphratica]) HSP 1 Score: 428.3 bits (1100), Expect = 1.3e-116 Identity = 245/377 (64.99%), Postives = 278/377 (73.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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