CSPI04G12170.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G12170.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Late embryogenesis abundant protein
Location	Chr4 : 10514818 .. 10515607 (-)
Sequence length	606

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCAACTTTTTGATAATCGTGCATTCCTTCCTCAGTGTTTCTCCCTAAAATTGAGCTCTGCAACACAACAAAAGTGGTGAAGAGTGAGATTAGCTGCCAATCCAGATATACCCGTACTTCTTTTTTTCACTCACTATTGTCATTAGTTTATGAGAAATTGCATCGATCTCAAATGCCACCAAATTTCCTATCCAGTCTAAAGCGACATACTCATCCTCTAATTTGGATCGCCGGCATAATCTGCGCCACCATAGCTCTTGCAGTAATCATAGCAGGCATCGTCATCTTCATCGGCTATGTTACGATCCGCCCTAGGGTACCGTCAATCAGTGTAACCGACGGTCATCTTGAAAGAATCCGAAGCAGTAGAACCGGATTGCTTGAAGTCCAAATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAAAGCACACGCAGGCTTTTCAAAGACGGATTTTGTCCTACTTTTCGACGGAATAGAAATCGCATCACTAGTAGCTCATCGGCCGTTCAAAGTGAACAAAATGAATTACCTGGATTTGCATTTCTTGGTGGAATCATCGGCAATTCCGCTGGATTCAACACAGATGCAGCATCTTAGCTGGTCGCTGAAGAGAGATTTGATACAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTTGGAGTTTTGGGACCGCTCAAGTTCTGGTGCCGATTGGATTGTCACCTCAGGTTTTTCCCGCGCAATGGAAGCTATATCCCCACGCCTTGTTCTTCAAAGCAAAAATAATTCCTTAGCACA

mRNA sequence

ATGCCACCAAATTTCCTATCCAGTCTAAAGCGACATACTCATCCTCTAATTTGGATCGCCGGCATAATCTGCGCCACCATAGCTCTTGCAGTAATCATAGCAGGCATCGTCATCTTCATCGGCTATGTTACGATCCGCCCTAGGGTACCGTCAATCAGTGTAACCGACGGTCATCTTGAAAGAATCCGAAGCAGTAGAACCGGATTGCTTGAAGTCCAAATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAAAGCACACGCAGGCTTTTCAAAGACGGATTTTGTCCTACTTTTCGACGGAATAGAAATCGCATCACTAGTAGCTCATCGGCCGTTCAAAGTGAACAAAATGAATTACCTGGATTTGCATTTCTTGGTGGAATCATCGGCAATTCCGCTGGATTCAACACAGATGCAGCATCTTAGCTGGTCGCTGAAGAGAGATTTGATACAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTTGGAGTTTTGGGACCGCTCAAGTTCTGGTGCCGATTGGATTGTCACCTCAGGTTTTTCCCGCGCAATGGAAGCTATATCCCCACGCCTTGTTCTTCAAAGCAAAAATAA

Coding sequence (CDS)

ATGCCACCAAATTTCCTATCCAGTCTAAAGCGACATACTCATCCTCTAATTTGGATCGCCGGCATAATCTGCGCCACCATAGCTCTTGCAGTAATCATAGCAGGCATCGTCATCTTCATCGGCTATGTTACGATCCGCCCTAGGGTACCGTCAATCAGTGTAACCGACGGTCATCTTGAAAGAATCCGAAGCAGTAGAACCGGATTGCTTGAAGTCCAAATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAAAGCACACGCAGGCTTTTCAAAGACGGATTTTGTCCTACTTTTCGACGGAATAGAAATCGCATCACTAGTAGCTCATCGGCCGTTCAAAGTGAACAAAATGAATTACCTGGATTTGCATTTCTTGGTGGAATCATCGGCAATTCCGCTGGATTCAACACAGATGCAGCATCTTAGCTGGTCGCTGAAGAGAGATTTGATACAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTTGGAGTTTTGGGACCGCTCAAGTTCTGGTGCCGATTGGATTGTCACCTCAGGTTTTTCCCGCGCAATGGAAGCTATATCCCCACGCCTTGTTCTTCAAAGCAAAAATAA

Homology

[Close]

BLAST of CSPI04G12170.1 vs. TrEMBL
Match: A0A0A0L1I9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G242860 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 3.2e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60
           MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120
           RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120

Query: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180
           YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC
Sbjct: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180

Query: 181 HLRFFPRNGSYIPTPCSSKQK 202
           HLRFFPRNGSYIPTPCSSKQK
Sbjct: 181 HLRFFPRNGSYIPTPCSSKQK 201

[Close]

BLAST of CSPI04G12170.1 vs. TrEMBL
Match: V4T9C5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003495mg PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.1e-58
Identity = 110/201 (54.73%), Postives = 142/201 (70.65%), Query Frame = 1


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60
           MPP F    +R THPLIW+  IIC  +A+AVIIAGIV+F GY+ + PR+P +SV   HL+
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120
             +    GLLE Q+ IV+R  N NAKA A FS T   L FDG++IA LVA  PF+V+K +
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNS 120

Query: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180
            +D +++VES  +PLD    +    SLK+D+++FDLKG SRTRWR+GVLG +KFWCRLDC
Sbjct: 121 SVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDC 180

Query: 181 HLRFFPRNGSYIPTPCSSKQK 202
            L+F P NGSYIP+ CSS  K
Sbjct: 181 QLKFHPSNGSYIPSRCSSTTK 200

[Close]

BLAST of CSPI04G12170.1 vs. TrEMBL
Match: A0A067DL89_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029005mg PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.1e-58
Identity = 110/201 (54.73%), Postives = 142/201 (70.65%), Query Frame = 1


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60
           MPP F    +R THPLIW+  IIC  +A+AVIIAGIV+F GY+ + PR+P +SV   HL+
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120
             +    GLLE Q+ IV+R  N NAKA A FS T   L FDG++IA LVA  PF+V+K +
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNS 120

Query: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180
            +D +++VES  +PLD    +    SLK+D+++FDLKG SRTRWR+GVLG +KFWCRLDC
Sbjct: 121 SVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDC 180

Query: 181 HLRFFPRNGSYIPTPCSSKQK 202
            L+F P NGSYIP+ CSS  K
Sbjct: 181 QLKFHPSNGSYIPSRCSSTTK 200

[Close]

BLAST of CSPI04G12170.1 vs. TrEMBL
Match: M5WBE7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014689mg PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56
Identity = 110/197 (55.84%), Postives = 140/197 (71.07%), Query Frame = 1


Query: 5   FLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRS 64
           F  + +R THPL+W A +IC  IA+AVIIAGI +F GY+ I PRVP I+VT  HL+  ++
Sbjct: 6   FHGATQRTTHPLVWFAAVICTVIAIAVIIAGIALFAGYMIIHPRVPFITVTSAHLDNFQN 65

Query: 65  SRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDL 124
           S  GLL+ ++ I+V+AEN N KAHA FS T F L F G+ IA LVA  PF V K + +D 
Sbjct: 66  SVAGLLDTEITIIVKAENDNTKAHASFSDTSFTLSFQGLNIARLVA-LPFDVKKNSSVDF 125

Query: 125 HFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF 184
           H+LV+SS+IPL   QM  +  SLKRD I F+LKG+ R RWRVG +G +KFW  L+CHLRF
Sbjct: 126 HYLVQSSSIPLSPEQMDQIDISLKRDKISFNLKGNLRARWRVGPIGSVKFWGHLNCHLRF 185

Query: 185 FPRNGSYIPTPCSSKQK 202
            P NGSYI +PCSS+ K
Sbjct: 186 HPSNGSYIHSPCSSRAK 201

[Close]

BLAST of CSPI04G12170.1 vs. TrEMBL
Match: A5ATK1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035515 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.2e-55
Identity = 108/202 (53.47%), Postives = 144/202 (71.29%), Query Frame = 1


Query: 1   MPPNFLS-SLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHL 60
           MPP  L     + THPL+W A +IC  IALAVI+AG+ +F+GY+ I PRVP+++VTD  L
Sbjct: 487 MPPRKLVVGSGQKTHPLVWCAAVICVFIALAVIVAGVCVFVGYLVIHPRVPALTVTDARL 546

Query: 61  ERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKM 120
           +R+  S+ G+++VQM + +RAEN NAKAHA FS T   + F  IEIA LVA+ PF V+K 
Sbjct: 547 DRLDFSQAGVMDVQMTVYIRAENHNAKAHASFSDTSLTMSFHEIEIAKLVAY-PFDVSKN 606

Query: 121 NYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLD 180
           + +D +++VESS+IPL S  M  +  SLK D I+FDLKGSS+T WR+G+LG +  WC L+
Sbjct: 607 SSIDFNYVVESSSIPLGSRDMDFVDRSLKEDKIKFDLKGSSKTHWRIGLLGSVTLWCHLN 666

Query: 181 CHLRFFPRNGSYIPTPCSSKQK 202
           C LRF P N SYI + CSSK K
Sbjct: 667 CELRFHPSNSSYIHSYCSSKSK 687

[Close]

BLAST of CSPI04G12170.1 vs. TAIR10
Match: AT5G45320.1 (AT5G45320.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 198.4 bits (503), Expect = 4.3e-51
Identity = 100/192 (52.08%), Postives = 134/192 (69.79%), Query Frame = 1


Query: 11  RH-THPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGL 70
           RH T P IW A IICA I++ VI+ GI++F+GY+ I PRVP ISV D HL+ ++    G+
Sbjct: 7   RHGTSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFLKYDIVGV 66

Query: 71  LEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDLHFLVE 130
           L+ Q+ IV+R EN NAKAHA F +T+F L ++G  IA L A   F+V K   + L +LV+
Sbjct: 67  LQTQLTIVIRVENDNAKAHALFDETEFKLSYEGKPIAILKAPE-FEVVKEKSMFLPYLVQ 126

Query: 131 SSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNG 190
           S  IPL+ T MQ + +++K+D+I F+LKG SRTRWRVG LG +KF C L C LRF P + 
Sbjct: 127 SYPIPLNPTMMQAVDYAVKKDVITFELKGGSRTRWRVGPLGSVKFECNLSCQLRFRPSDH 186

Query: 191 SYIPTPCSSKQK 202
           SYIP+PC+S  K
Sbjct: 187 SYIPSPCTSAHK 197

[Close]

BLAST of CSPI04G12170.1 vs. TAIR10
Match: AT3G26350.1 (AT3G26350.1 LOCATED IN: chloroplast)

HSP 1 Score: 68.6 bits (166), Expect = 5.2e-12
Identity = 48/191 (25.13%), Postives = 84/191 (43.98%), Query Frame = 1


Query: 11  RHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLL 70
           R T+ + W A   CA   + +I+ G++I I Y+  RPR P + ++  +L         LL
Sbjct: 167 RETNAMTWSAAFCCAIFWVILILGGLIILIVYLVYRPRSPYVDISAANLNAAYLDMGFLL 226

Query: 71  EVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDLHFLVES 130
              + I+    N + K+   FS   F L +    IA+     PFKV K   +  +  + S
Sbjct: 227 NGDLTILANVTNPSKKSSVEFSYVTFELYYYNTLIATQYI-EPFKVPKKTSMFANVHLVS 286

Query: 131 SAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF-FPRNG 190
           S + L +TQ + L   ++   +  +L+G    R  +G L    +     C +    P  G
Sbjct: 287 SQVQLQATQSRELQRQIETGPVLLNLRGMFHARSHIGPLFRYSYKLHTHCSVSLNGPPLG 346

Query: 191 SYIPTPCSSKQ 201
           +     C++K+
Sbjct: 347 AMRARRCNTKR 356

[Close]

BLAST of CSPI04G12170.1 vs. TAIR10
Match: AT1G13050.1 (AT1G13050.1 unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-11
Identity = 49/192 (25.52%), Postives = 84/192 (43.75%), Query Frame = 1


Query: 11  RHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLL 70
           + T P+   A I CA + + +I++G+++ + Y+  RPR P   ++   L         +L
Sbjct: 128 KRTKPMTLPATICCAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVL 187

Query: 71  EVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAH-RPFKVNKMNYLDLHFLVE 130
              + +VV   N + K+   FS   F L F    IA+   H  PF V K   +   F + 
Sbjct: 188 NGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIAT--EHIEPFIVPKGMSMFTSFHLV 247

Query: 131 SSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF-FPRN 190
           SS + +   Q Q L   L    +  +L+G+   R  +G L    +W    C +    P  
Sbjct: 248 SSQVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLNTPPA 307

Query: 191 GSYIPTPCSSKQ 201
           G+     C++K+
Sbjct: 308 GTMRARRCNTKR 317

[Close]

BLAST of CSPI04G12170.1 vs. NCBI nr
Match: gi|700198828|gb|KGN53986.1| (hypothetical protein Csa_4G242860 [Cucumis sativus])

HSP 1 Score: 409.1 bits (1050), Expect = 4.6e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60
           MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120
           RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120

Query: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180
           YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC
Sbjct: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180

Query: 181 HLRFFPRNGSYIPTPCSSKQK 202
           HLRFFPRNGSYIPTPCSSKQK
Sbjct: 181 HLRFFPRNGSYIPTPCSSKQK 201

[Close]

BLAST of CSPI04G12170.1 vs. NCBI nr
Match: gi|567880675|ref|XP_006432896.1| (hypothetical protein CICLE_v10003495mg [Citrus clementina])

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57
Identity = 110/201 (54.73%), Postives = 142/201 (70.65%), Query Frame = 1


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60
           MPP F    +R THPLIW+  IIC  +A+AVIIAGIV+F GY+ + PR+P +SV   HL+
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120
             +    GLLE Q+ IV+R  N NAKA A FS T   L FDG++IA LVA  PF+V+K +
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNS 120

Query: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180
            +D +++VES  +PLD    +    SLK+D+++FDLKG SRTRWR+GVLG +KFWCRLDC
Sbjct: 121 SVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDC 180

Query: 181 HLRFFPRNGSYIPTPCSSKQK 202
            L+F P NGSYIP+ CSS  K
Sbjct: 181 QLKFHPSNGSYIPSRCSSTTK 200

[Close]

BLAST of CSPI04G12170.1 vs. NCBI nr
Match: gi|645265122|ref|XP_008238002.1| (PREDICTED: uncharacterized protein LOC103336689 [Prunus mume])

HSP 1 Score: 231.1 bits (588), Expect = 1.7e-57
Identity = 111/197 (56.35%), Postives = 141/197 (71.57%), Query Frame = 1


Query: 5   FLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRS 64
           F  + +R THPL+W A +IC  IA+AVII GIV+F+GY+ I PRVP I+VT  HL+  ++
Sbjct: 6   FHGATQRATHPLVWFAAVICTVIAIAVIITGIVVFVGYMIIHPRVPFITVTSAHLDNFQN 65

Query: 65  SRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDL 124
           S  GLL+ ++ ++VRAEN N KAHA FS T F L F G+ IA LVA  PF V K + +D 
Sbjct: 66  SVAGLLDTEITLIVRAENDNPKAHASFSDTSFTLSFQGLNIARLVA-LPFDVKKNSSVDF 125

Query: 125 HFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF 184
           H+LV+SS+IPL   QM  +  SLKRD I F+LKG+SR RWRVG  G +KFW  L+CHLRF
Sbjct: 126 HYLVQSSSIPLSPEQMDQIDISLKRDKISFNLKGNSRARWRVGPFGSVKFWDHLNCHLRF 185

Query: 185 FPRNGSYIPTPCSSKQK 202
            P NGSYI +PCSS+ K
Sbjct: 186 HPSNGSYIHSPCSSRAK 201

[Close]

BLAST of CSPI04G12170.1 vs. NCBI nr
Match: gi|595850056|ref|XP_007209845.1| (hypothetical protein PRUPE_ppa014689mg [Prunus persica])

HSP 1 Score: 227.6 bits (579), Expect = 1.9e-56
Identity = 110/197 (55.84%), Postives = 140/197 (71.07%), Query Frame = 1


Query: 5   FLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRS 64
           F  + +R THPL+W A +IC  IA+AVIIAGI +F GY+ I PRVP I+VT  HL+  ++
Sbjct: 6   FHGATQRTTHPLVWFAAVICTVIAIAVIIAGIALFAGYMIIHPRVPFITVTSAHLDNFQN 65

Query: 65  SRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDL 124
           S  GLL+ ++ I+V+AEN N KAHA FS T F L F G+ IA LVA  PF V K + +D 
Sbjct: 66  SVAGLLDTEITIIVKAENDNTKAHASFSDTSFTLSFQGLNIARLVA-LPFDVKKNSSVDF 125

Query: 125 HFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF 184
           H+LV+SS+IPL   QM  +  SLKRD I F+LKG+ R RWRVG +G +KFW  L+CHLRF
Sbjct: 126 HYLVQSSSIPLSPEQMDQIDISLKRDKISFNLKGNLRARWRVGPIGSVKFWGHLNCHLRF 185

Query: 185 FPRNGSYIPTPCSSKQK 202
            P NGSYI +PCSS+ K
Sbjct: 186 HPSNGSYIHSPCSSRAK 201

[Close]

BLAST of CSPI04G12170.1 vs. NCBI nr
Match: gi|1009158815|ref|XP_015897483.1| (PREDICTED: uncharacterized protein LOC107431113 [Ziziphus jujuba])

HSP 1 Score: 223.8 bits (569), Expect = 2.7e-55
Identity = 105/192 (54.69%), Postives = 141/192 (73.44%), Query Frame = 1


Query: 10  KRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGL 69
           ++ THPLIW A IICA IA AVIIAG+ +FIGY+ I PRVP I+V D HL++I+S   GL
Sbjct: 11  EKRTHPLIWFAAIICAIIATAVIIAGVGVFIGYMVIHPRVPVIAVVDAHLDKIQSDIAGL 70

Query: 70  LEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDLHFLVE 129
           LE Q+ I+++A+N NAKAHA FS T F+L F G+ IA LVA  PF+V K + ++ +++V 
Sbjct: 71  LETQVTILIKAQNDNAKAHASFSDTSFILSFQGMMIAKLVA-EPFEVKKNDSVEFNYVVP 130

Query: 130 SSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNG 189
           SS+IPL   QM  +  +LK+D I FDL+G+SR RWR+G+ G +KFWC L C L+F P NG
Sbjct: 131 SSSIPLTPDQMDEVDLALKQDKITFDLRGNSRARWRIGLFGSVKFWCHLSCRLKFHPLNG 190

Query: 190 SYIPTPCSSKQK 202
           +Y+  PCSS+ K
Sbjct: 191 TYMNAPCSSRAK 201

The following BLAST results are available for this feature:

BLAST of CSPI04G12170.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI04G12170.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1I9_CUCSA	3.2e-111	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G242860 PE=4 SV=1	[more]
V4T9C5_9ROSI	9.1e-58	54.73	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003495mg PE=4 SV=1	[more]
A0A067DL89_CITSI	9.1e-58	54.73	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029005mg PE=4 SV=1	[more]
M5WBE7_PRUPE	1.3e-56	55.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014689mg PE=4 SV=1	[more]
A5ATK1_VITVI	4.2e-55	53.47	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035515 PE=4 SV=1	[more]

BLAST of CSPI04G12170.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45320.1	4.3e-51	52.08	FUNCTIONS IN: molecular_function unknown	[more]
AT3G26350.1	5.2e-12	25.13	LOCATED IN: chloroplast	[more]
AT1G13050.1	2.6e-11	25.52	unknown protein	[more]

BLAST of CSPI04G12170.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700198828\|gb\|KGN53986.1\|	4.6e-111	100.00	hypothetical protein Csa_4G242860 [Cucumis sativus]	[more]
gi\|567880675\|ref\|XP_006432896.1\|	1.3e-57	54.73	hypothetical protein CICLE_v10003495mg [Citrus clementina]	[more]
gi\|645265122\|ref\|XP_008238002.1\|	1.7e-57	56.35	PREDICTED: uncharacterized protein LOC103336689 [Prunus mume]	[more]
gi\|595850056\|ref\|XP_007209845.1\|	1.9e-56	55.84	hypothetical protein PRUPE_ppa014689mg [Prunus persica]	[more]
gi\|1009158815\|ref\|XP_015897483.1\|	2.7e-55	54.69	PREDICTED: uncharacterized protein LOC107431113 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI04G12170	CSPI04G12170	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI04G12170.1	CSPI04G12170.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI04G12170.1.utr3p1	CSPI04G12170.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI04G12170.1.cds1	CSPI04G12170.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI04G12170.1.utr5p1	CSPI04G12170.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 10..201 score: 3.6
None	No IPR available	PANTHER	PTHR31852:SF9	SUBFAMILY NOT NAMED	coord: 10..201 score: 3.6