CSPI02G03840.2 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATACCCTTCATGAATAAAGCAAAGCAATATTAACAGTACAAGCAAATCCAAAGATACCCCAATGGCAGAAGAAACAAAAAAAGAAAGTCTAAAGAAAGCAAGAACCTCAAATACTAATTATTTCTATTCAACACCTCGCCCATGCAGATTTGATGCCTTCTCCTTGACTCTGCAGCAGCACAATGGCCTTCGCCACCCCCAAACTTGGCCTCTTCCTCTGCGGTCTTGCCCATGGCTTCTTGCTTTTCGCGAGCTTAGTGCACTGTGATGGTTCACTCTCCCTCTTTCTCAATACACACACACACACACACAAACACAAGAGCTTCGTAGTTCCTAGTTTTTGATGGGTTCTTCTGTGCATTGAGATGGCTCTCTCTGTCTATTTCTCTGCTTCTAAACACTCTTACACACATAGTTCCATAGTTCCATATCTTTGCAGGGTTCTTTTGTAATCTCACAATTATAATTCTCCCTTATCCATAGACGTTATTTCCCTTATTGCTGCCGCACAAAACCTCACACCCAATTATCCATCATTTGCAGTGAATGAAGACACACTTTTCAAAGCCATGAACAAGTACAGAAGTTCCAAAGAACTTACACCCATGCATAGGAACTCAAAAGCAGACTGCCTCGTCAAGCAAATTGCTTGGGACTTAGACGATCAGTCGCCCCTCAGCATCTTCACCAGCGGCTCCCCCATTATTCCAACCAATTTAACCCAACTCCCCAATCTCCCGGACTACCTAACCAAGTGCAAAATCGAGCTCAACAACACGAGAAAAGGCTTGATTTTGCCCCTTCACATCCCCACGTTGGCGTTGAAACTTGTTCTTCATGGATGTACACATTCCCAGATGGACAATTACTTAAGCAAACCTGAATTCACGTCGATCGGAATTGGGTGTTATGAAGAATGGGCAGTTTTCGCTTTCGCCACCGATTCTCCCACCGGAAGCTTTAATTCTGCCGTGAAATTGTCTAAGTTGGGTCATCAGCATTTCTTCTTGGTGTCGTCCCTGTTGTTTGGGTTGTTTTTTCTTCTCTCCGGCTGAAGGGATATTTTCCATCCGAAACGACATGTCGATATCGTTTGGAAAATTTTAACTTTCAAGGCATGGTGGGACAATATTGCCCTTCGCTTCAATTTGTTAAAGATAAATACATTTTGGTCTCCGTTATTTATTTATTTTTCTTAATTTGTTTAATTTCAGCTCTTTTAGATTAATAAAAT ATGGCCTTCGCCACCCCCAAACTTGGCCTCTTCCTCTGCGGTCTTGCCCATGGCTTCTTGCTTTTCGCGAGCTTAGTGCACTGTGATGTGAATGAAGACACACTTTTCAAAGCCATGAACAAGTACAGAAGTTCCAAAGAACTTACACCCATGCATAGGAACTCAAAAGCAGACTGCCTCGTCAAGCAAATTGCTTGGGACTTAGACGATCAGTCGCCCCTCAGCATCTTCACCAGCGGCTCCCCCATTATTCCAACCAATTTAACCCAACTCCCCAATCTCCCGGACTACCTAACCAAGTGCAAAATCGAGCTCAACAACACGAGAAAAGGCTTGATTTTGCCCCTTCACATCCCCACGTTGGCGTTGAAACTTGTTCTTCATGGATGTACACATTCCCAGATGGACAATTACTTAAGCAAACCTGAATTCACGTCGATCGGAATTGGGTGTTATGAAGAATGGGCAGTTTTCGCTTTCGCCACCGATTCTCCCACCGGAAGCTTTAATTCTGCCGTGAAATTGTCTAAGTTGGGTCATCAGCATTTCTTCTTGGTGTCGTCCCTGTTGTTTGGGTTGTTTTTTCTTCTCTCCGGCTGA ATGGCCTTCGCCACCCCCAAACTTGGCCTCTTCCTCTGCGGTCTTGCCCATGGCTTCTTGCTTTTCGCGAGCTTAGTGCACTGTGATGTGAATGAAGACACACTTTTCAAAGCCATGAACAAGTACAGAAGTTCCAAAGAACTTACACCCATGCATAGGAACTCAAAAGCAGACTGCCTCGTCAAGCAAATTGCTTGGGACTTAGACGATCAGTCGCCCCTCAGCATCTTCACCAGCGGCTCCCCCATTATTCCAACCAATTTAACCCAACTCCCCAATCTCCCGGACTACCTAACCAAGTGCAAAATCGAGCTCAACAACACGAGAAAAGGCTTGATTTTGCCCCTTCACATCCCCACGTTGGCGTTGAAACTTGTTCTTCATGGATGTACACATTCCCAGATGGACAATTACTTAAGCAAACCTGAATTCACGTCGATCGGAATTGGGTGTTATGAAGAATGGGCAGTTTTCGCTTTCGCCACCGATTCTCCCACCGGAAGCTTTAATTCTGCCGTGAAATTGTCTAAGTTGGGTCATCAGCATTTCTTCTTGGTGTCGTCCCTGTTGTTTGGGTTGTTTTTTCTTCTCTCCGGCTGA
BLAST of CSPI02G03840.2 vs. Swiss-Prot
Match: UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19250 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 9.7e-21 Identity = 70/188 (37.23%), Postives = 90/188 (47.87%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. Swiss-Prot
Match: UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06035 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19 Identity = 62/187 (33.16%), Postives = 97/187 (51.87%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. Swiss-Prot
Match: UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana GN=At5g19240 PE=2 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 2.6e-13 Identity = 55/175 (31.43%), Postives = 85/175 (48.57%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. TrEMBL
Match: A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 1.0e-93 Identity = 173/199 (86.93%), Postives = 180/199 (90.45%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. TrEMBL
Match: A0A0A0LIM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021650 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 1.9e-87 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. TrEMBL
Match: W9S359_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002452 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 3.0e-29 Identity = 74/191 (38.74%), Postives = 113/191 (59.16%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. TrEMBL
Match: A0A0A0LGC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021640 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.7e-28 Identity = 74/190 (38.95%), Postives = 111/190 (58.42%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. TrEMBL
Match: M5WK00_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011720mg PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.2e-25 Identity = 74/195 (37.95%), Postives = 114/195 (58.46%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. TAIR10
Match: AT1G54860.1 (AT1G54860.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23 Identity = 58/160 (36.25%), Postives = 88/160 (55.00%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. TAIR10
Match: AT5G19250.1 (AT5G19250.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 101.7 bits (252), Expect = 5.5e-22 Identity = 70/188 (37.23%), Postives = 90/188 (47.87%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. TAIR10
Match: AT3G06035.1 (AT3G06035.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 98.2 bits (243), Expect = 6.1e-21 Identity = 62/187 (33.16%), Postives = 97/187 (51.87%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. TAIR10
Match: AT5G19240.1 (AT5G19240.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 77.0 bits (188), Expect = 1.4e-14 Identity = 55/175 (31.43%), Postives = 85/175 (48.57%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. NCBI nr
Match: gi|150036257|gb|ABR67420.1| (GPI-anchored protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 350.9 bits (899), Expect = 1.5e-93 Identity = 173/199 (86.93%), Postives = 180/199 (90.45%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. NCBI nr
Match: gi|659070382|ref|XP_008454803.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo]) HSP 1 Score: 350.9 bits (899), Expect = 1.5e-93 Identity = 173/199 (86.93%), Postives = 180/199 (90.45%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. NCBI nr
Match: gi|700205775|gb|KGN60894.1| (hypothetical protein Csa_2G021650 [Cucumis sativus]) HSP 1 Score: 330.1 bits (845), Expect = 2.7e-87 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. NCBI nr
Match: gi|659070380|ref|XP_008454795.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo]) HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31 Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = 1
BLAST of CSPI02G03840.2 vs. NCBI nr
Match: gi|703135332|ref|XP_010105845.1| (hypothetical protein L484_002452 [Morus notabilis]) HSP 1 Score: 136.7 bits (343), Expect = 4.4e-29 Identity = 74/191 (38.74%), Postives = 113/191 (59.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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