CSPI02G03780.2 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAAATGCTTCCTTATAAATTCAACTTCTTCACTTTCATTTCCTTCTCACTCTTACTCAATACGTTGACGAAATCCCAACCTTTTCAAAGTCTCCGGCCACTTTCCGATGACTTCTCCGGCTAGGTATCTACCTATCTCTTCATGTTCGATTGGACTCCGCAATCTTTGTCTCTCTCTCTTTACTATCTCTTCTGTTCATCGTCATCGGTTAATGCAGCAGAGGAGGGGTTTTTCTCTTTTCTTTTTAATCACTGTCTTCTTTTTATTGGTATTTGAACGTTGTATTTATGAAGAGGGTGGGTATTAGGGTAAAGGGTTTTTTGTGGTATTGAGAAATGAGCTCTAGTTTCGGATTTTATGAAGAGTTTAAAGGTAAATTTTATGTTTTGGTTGATGGGAATTGAATGTGGGCTTATCTAGTGATCATTTTGCCGTGTTTATGTTTTGATTTTTTGCTTAATGTTGAGTGGGAGCTTTTGGTTTTTGGTTGATTAAGAAGGAAACGTGGTGAGATGGAAACCAGGGGGAACTTTGTTTGGTGATTTTAAACAAGTTGAGGTTTTTTCGTAATGGGAGTCCGTGGATGAACCATTAGTGTTTTCTCTTATCGCTCTATTTATATTTTGGAACGAGATATGTTCTTTGGTTGGCAAGAAATCAAATAGTTGGTAAGACAGAGATGACCTTATTCATTACACTTCTTTGAAAAATGGAAGGAGAATCTTCCAACGATGTAGAGTGGATTACAAAAAGTGTCTTCTACTTGGATATAAAATCAGTGAGATTCTGAGGCTACGGTCGTTTAAAGAATTTGTACATTTGCACCCACTAACAGCAGAGAAGAGCAGCAAGTTTAAGCAGACATAATAAGGTTTAGCTTTCCAAAAGACAGCTGTTTCTTTCCCTCCACAGAGTCTTGTTGAAAGCTTCCACCAAAGATTCAGTTCATGGGTTCATGAGTTCTTTAATGATCCTATTTTAGAAAGATTTGGAGGGTGGAAAACAGTAATTTCTTATTTGGATTAGTAGATATTTTCAAACTTCCCTTAACTTTTGCCTTAGCAATCTGTCAAAGTAGTGTTGAACCATGGCGTTTTGCTTAGATGTATAGAAGTATTGACCTGAAATTTGCACTACTTCTAGAACGTGTTTAGGGAAATTTTGTATCTTTATAGACGCATTCAAATTCCCTTGGGTCATATCAATGTTTGTAATTGCTTTTCCTCGTTGATTTTTGTCTTAACTTTCAAGCTAAATAGCCGATATTATCCTGTTATTTCCCTTTCGAAACCATAAAGCAGTACATCTTATACACTTTAGCTCTAGAGGCTAAGGTCCATTTGATAACAGATTCTTGAATTTAGTTGAGATTTATTATCTGCATGACATGCCTCATTTAAAAAGCCAACTTCAGGTATTATAGTCTTAATTGGTTAAGATATTATAACCTTGATTTAGAAATCAAAGTTTTGAATCTCCACCCATCTGACTCAAGGCAAATTATCACTAATAATTTTATATTTTTGGATTTATTTTTGTTAACCTTTTCTTAATCGTAAATGATAAACATCATATATACTGAATTAAAATATAAAGAAATGAATTCTTGTTTCTTTGAAGCTGGCAATGATACAAGGAAATGGCAAATATGCATACCTCATAATGGAACTTGTGTTGTTCCGGTTATCTGTTCTCTAAGGAAATCCCATAAATATACAAGGGAATGTCAACGATTTGGAAATCAAATTCTCTGTCATAGTTATAAATAACACTAAATTTGATCAGTTTTGTTTTTTGTTTTGGCTTCCAACCCCCGGTATGTAGTTTCTCTTGGACGCCTTAGTGGCCTCTTGTAACACCCTCCTCTCTTCTAAGGATTTCCTTTTTTTTTGCTGTCTTGTTCTCTGTCTTCCTCAGGTATACTCCCAGATGTCCAAAATCACAAAATATCCATTTGAAAGCCCAGACCAGGCCTCACAGGTTTTGATAGTCCAAGCACATCAATCAACATTAAACTCGTGCCATTTTTTTAGACATGTGGTACACTCATTTGTGCCTGTCCCTGTAGCTTAACCTCCAGGCATTCATCTGTGTCTTCTGATGTCAGTAACGTGAATACATGCTCTGGCTTTGAAAAGAAACTAGACCATTAAGTGAATCCTCTCTGTGGCATTTTGGCTGCTGTTTGAGAGAGAATTATTTACTCTTGAGATTTTTTTTTCAAAGAGATTATGTTTGTAAGGAAAAATTGTTGTAGGTGGCTGCACAATCTGCTTGTGTTCTATCATAGCCCATCTTCCATTTGTTGTTTCAACCACACCAGGTTCACCTTGGTGAAGAAAGAAAATGTTTTGGGGGATTTTGGCGCGCAAAGTTGAGTTGGTAATTATTATAGAAGTGGAGTAATTGGGATAGTTGACTTGAATAATGAGGTGATAAATAGGTGGGTTCAATAACCACTCTCTTTAATTATTAGCAAACCAAACAGTGGGTGAGTTCTTTTACCCACCCAACCCAACCTAACTTGGGGGACCAAACACCCCAGGACTAAAATTTCTTTCTTTTTCCCACTAATCTTCTCTTGCAAGTATGTATGCATTAGAATAGTTTTGATCAAATGGAAAGTGTAGACCTAAGCATATAGTTCAAATAGGAAATATATTTGCATTAGAATAGTTTGACCAAGCAAGTTTTTTATAGTTCAAAATCTTTGTTCTCCTGAAGTTCTTCTTTTGATGGATGAAATTCTTTGAGATCAGTGGAGTGTGCACTGACCATAATGTGAGGGAGATCCTTCGGAACCCTTTTTTATTAGAAAAAGAATGGAAGTTTAAAGACTCATTCATAATGTTTGTTCAATGTTCAATGAATAGTATGAAAGACTGCCATCAGACCATGTTGTGATCTCAATGTTCCTTGTCTTGCAGGGTTGAGGAAACAAGAAAAAATGAGGCAGATTCTTCAAATCCTCGTCAACGTATTCTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACATTCCTTCTTCTCCGCGGGTTGAAGATCCAGAGGCTATGGTGAAGGTTGGGCCAGCTATGGTATATTGCCCTCTCACAACCAGTCAAGAGTGGGATGATATAGTATCTGCCACCAAAACTGGAGTTTCCCTCACTGGGACTGCAGCCATGGGAAAAGTTGGACCAGTCATTGGACGTGTAGACATTGGCGAGAACGAGAATTCATACTTCTTTCGCGTATCTCTTCCAGGGGTTGCTAGAGATCAAAGTGAGTGTTTGTTGAAACTGATCAATTTTCTCTCATTTTGCTACCCTAATGTGCAGCGTTAATGTTATCCTAACAATACAGGTACACGATTAGTTCTCTTATCTGACCAGACTATTCTTTAATGGCAGCAGACAGTTTCAGCTGCGACATGGAACCGGATGGGCAAGTGAAAATAAGAGGAGTAACAACAACAGGGGAGAACATAGTTTGTAAGAATTCACAAATATTTCGGATGCAATCGAAAAATCTATGCCCGCCAGGTCACTTCTCTATCACTTTCCGGTTACCTGGCCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCAGATGGGATTTTAGAAGGGAGTGTAGCTAAAAGGTGATTTAACAGGCTTAAATGATTTGTTTTGGGGTGTTAATGGGTTAGAATACAGAGATGATTGTTGGCTCATTTTGTTATGCTAGGTTTAGGAAAAGGCCTTTATGTGGAAAGAAAACTATTTTTTAGGAAACATGGGCTATTAGGAAAGTCGTTAACTCATTTTTTTGTCTCTCATTCCTCTAGAAGGAGATCCTTTGAAAGGATCAGCTTTTATTTTCTTGACGAAGGTCCCAG ATGACTTCTCCGGCTAGGGTTGAGGAAACAAGAAAAAATGAGGCAGATTCTTCAAATCCTCGTCAACGTATTCTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACATTCCTTCTTCTCCGCGGGTTGAAGATCCAGAGGCTATGGTGAAGGTTGGGCCAGCTATGGTATATTGCCCTCTCACAACCAGTCAAGAGTGGGATGATATAGTATCTGCCACCAAAACTGGAGTTTCCCTCACTGGGACTGCAGCCATGGGAAAAGTTGGACCAGTCATTGGACGTGTAGACATTGGCGAGAACGAGAATTCATACTTCTTTCGCGTATCTCTTCCAGGGGTTGCTAGAGATCAAAACAGTTTCAGCTGCGACATGGAACCGGATGGGCAAGTGAAAATAAGAGGAGTAACAACAACAGGGGAGAACATAGTTTGTAAGAATTCACAAATATTTCGGATGCAATCGAAAAATCTATGCCCGCCAGGTCACTTCTCTATCACTTTCCGGTTACCTGGCCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCAGATGGGATTTTAGAAGGGAGTGTAGCTAAAAGGTGA ATGACTTCTCCGGCTAGGGTTGAGGAAACAAGAAAAAATGAGGCAGATTCTTCAAATCCTCGTCAACGTATTCTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACATTCCTTCTTCTCCGCGGGTTGAAGATCCAGAGGCTATGGTGAAGGTTGGGCCAGCTATGGTATATTGCCCTCTCACAACCAGTCAAGAGTGGGATGATATAGTATCTGCCACCAAAACTGGAGTTTCCCTCACTGGGACTGCAGCCATGGGAAAAGTTGGACCAGTCATTGGACGTGTAGACATTGGCGAGAACGAGAATTCATACTTCTTTCGCGTATCTCTTCCAGGGGTTGCTAGAGATCAAAACAGTTTCAGCTGCGACATGGAACCGGATGGGCAAGTGAAAATAAGAGGAGTAACAACAACAGGGGAGAACATAGTTTGTAAGAATTCACAAATATTTCGGATGCAATCGAAAAATCTATGCCCGCCAGGTCACTTCTCTATCACTTTCCGGTTACCTGGCCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCAGATGGGATTTTAGAAGGGAGTGTAGCTAAAAGGTGA
BLAST of CSPI02G03780.2 vs. Swiss-Prot
Match: IDM2L_ARATH (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22.3 PE=1 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 2.1e-58 Identity = 112/204 (54.90%), Postives = 155/204 (75.98%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. Swiss-Prot
Match: IDM2_ARATH (Increased DNA methylation 2 OS=Arabidopsis thaliana GN=IDM2 PE=1 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 9.6e-32 Identity = 62/106 (58.49%), Postives = 84/106 (79.25%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. Swiss-Prot
Match: IDM3_ARATH (Increased DNA methylation 3 OS=Arabidopsis thaliana GN=IDM3 PE=1 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.2e-27 Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. TrEMBL
Match: A0A0A0LGB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021590 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 3.2e-111 Identity = 202/205 (98.54%), Postives = 204/205 (99.51%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. TrEMBL
Match: Q84KA6_CUCME (Heat shock protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 3.1e-93 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. TrEMBL
Match: Q6GX30_CUCME (Hsp2 (Fragment) OS=Cucumis melo GN=Hsp2 PE=2 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 2.5e-79 Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. TrEMBL
Match: W9QBR8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001971 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.9e-63 Identity = 118/187 (63.10%), Postives = 154/187 (82.35%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. TrEMBL
Match: A0A067EWN6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025769mg PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 2.4e-61 Identity = 116/195 (59.49%), Postives = 151/195 (77.44%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. TAIR10
Match: AT1G54850.1 (AT1G54850.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 226.9 bits (577), Expect = 1.2e-59 Identity = 112/204 (54.90%), Postives = 155/204 (75.98%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. TAIR10
Match: AT1G54840.1 (AT1G54840.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 138.3 bits (347), Expect = 5.4e-33 Identity = 62/106 (58.49%), Postives = 84/106 (79.25%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. TAIR10
Match: AT1G20870.1 (AT1G20870.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 123.2 bits (308), Expect = 1.8e-28 Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. TAIR10
Match: AT1G76440.1 (AT1G76440.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 110.9 bits (276), Expect = 9.2e-25 Identity = 58/118 (49.15%), Postives = 76/118 (64.41%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. NCBI nr
Match: gi|449442837|ref|XP_004139187.1| (PREDICTED: uncharacterized protein LOC101211821 isoform X2 [Cucumis sativus]) HSP 1 Score: 415.6 bits (1067), Expect = 5.0e-113 Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. NCBI nr
Match: gi|778666755|ref|XP_011648803.1| (PREDICTED: uncharacterized protein LOC101211821 isoform X1 [Cucumis sativus]) HSP 1 Score: 409.1 bits (1050), Expect = 4.7e-111 Identity = 202/205 (98.54%), Postives = 204/205 (99.51%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. NCBI nr
Match: gi|659070402|ref|XP_008454882.1| (PREDICTED: uncharacterized protein LOC103495185 isoform X2 [Cucumis melo]) HSP 1 Score: 408.3 bits (1048), Expect = 7.9e-111 Identity = 199/204 (97.55%), Postives = 201/204 (98.53%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. NCBI nr
Match: gi|659070400|ref|XP_008454874.1| (PREDICTED: uncharacterized protein LOC103495185 isoform X1 [Cucumis melo]) HSP 1 Score: 401.7 bits (1031), Expect = 7.4e-109 Identity = 198/205 (96.59%), Postives = 201/205 (98.05%), Query Frame = 1
BLAST of CSPI02G03780.2 vs. NCBI nr
Match: gi|28558785|gb|AAO45756.1| (heat shock protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 349.4 bits (895), Expect = 4.4e-93 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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