CSPI02G03780.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCCCAACCTTTTCAAAGTCTCCGGCCACTTTCCGATGACTTCTCCGGCTAGGTATCTACCTATCTCTTCATGTTCGATTGGACTCCGCAATCTTTGTCTCTCTCTCTTTACTATCTCTTCTGTTCATCGTCATCGGTTAATGCAGCAGAGGAGGGGTTTTTCTCTTTTCTTTTTAATCACTGTCTTCTTTTTATTGGTATTTGAACGTTGTATTTATGAAGAGGGTGGGTATTAGGGTAAAGGGTTTTTTGTGGTATTGAGAAATGAGCTCTAGTTTCGGATTTTATGAAGAGTTTAAAGGTAAATTTTATGTTTTGGTTGATGGGAATTGAATGTGGGCTTATCTAGTGATCATTTTGCCGTGTTTATGTTTTGATTTTTTGCTTAATGTTGAGTGGGAGCTTTTGGTTTTTGGTTGATTAAGAAGGAAACGTGGTGAGATGGAAACCAGGGGGAACTTTGTTTGGTGATTTTAAACAAGTTGAGGTTTTTTCGTAATGGGAGTCCGTGGATGAACCATTAGTGTTTTCTCTTATCGCTCTATTTATATTTTGGAACGAGATATGTTCTTTGGTTGGCAAGAAATCAAATAGTTGGTAAGACAGAGATGACCTTATTCATTACACTTCTTTGAAAAATGGAAGGAGAATCTTCCAACGATGTAGAGTGGATTACAAAAAGTGTCTTCTACTTGGATATAAAATCAGTGAGATTCTGAGGCTACGGTCGTTTAAAGAATTTGTACATTTGCACCCACTAACAGCAGAGAAGAGCAGCAAGTTTAAGCAGACATAATAAGGTTTAGCTTTCCAAAAGACAGCTGTTTCTTTCCCTCCACAGAGTCTTGTTGAAAGCTTCCACCAAAGATTCAGTTCATGGGTTCATGAGTTCTTTAATGATCCTATTTTAGAAAGATTTGGAGGGTGGAAAACAGTAATTTCTTATTTGGATTAGTAGATATTTTCAAACTTCCCTTAACTTTTGCCTTAGCAATCTGTCAAAGTAGTGTTGAACCATGGCGTTTTGCTTAGATGTATAGAAGTATTGACCTGAAATTTGCACTACTTCTAGAACGTGTTTAGGGAAATTTTGTATCTTTATAGACGCATTCAAATTCCCTTGGGTCATATCAATGTTTGTAATTGCTTTTCCTCGTTGATTTTTGTCTTAACTTTCAAGCTAAATAGCCGATATTATCCTGTTATTTCCCTTTCGAAACCATAAAGCAGTACATCTTATACACTTTAGCTCTAGAGGCTAAGGTCCATTTGATAACAGATTCTTGAATTTAGTTGAGATTTATTATCTGCATGACATGCCTCATTTAAAAAGCCAACTTCAGGTATTATAGTCTTAATTGGTTAAGATATTATAACCTTGATTTAGAAATCAAAGTTTTGAATCTCCACCCATCTGACTCAAGGCAAATTATCACTAATAATTTTATATTTTTGGATTTATTTTTGTTAACCTTTTCTTAATCGTAAATGATAAACATCATATATACTGAATTAAAATATAAAGAAATGAATTCTTGTTTCTTTGAAGCTGGCAATGATACAAGGAAATGGCAAATATGCATACCTCATAATGGAACTTGTGTTGTTCCGGTTATCTGTTCTCTAAGGAAATCCCATAAATATACAAGGGAATGTCAACGATTTGGAAATCAAATTCTCTGTCATAGTTATAAATAACACTAAATTTGATCAGTTTTGTTTTTTGTTTTGGCTTCCAACCCCCGGTATGTAGTTTCTCTTGGACGCCTTAGTGGCCTCTTGTAACACCCTCCTCTCTTCTAAGGATTTCCTTTTTTTTTGCTGTCTTGTTCTCTGTCTTCCTCAGGTATACTCCCAGATGTCCAAAATCACAAAATATCCATTTGAAAGCCCAGACCAGGCCTCACAGGTTTTGATAGTCCAAGCACATCAATCAACATTAAACTCGTGCCATTTTTTTAGACATGTGGTACACTCATTTGTGCCTGTCCCTGTAGCTTAACCTCCAGGCATTCATCTGTGTCTTCTGATGTCAGTAACGTGAATACATGCTCTGGCTTTGAAAAGAAACTAGACCATTAAGTGAATCCTCTCTGTGGCATTTTGGCTGCTGTTTGAGAGAGAATTATTTACTCTTGAGATTTTTTTTTCAAAGAGATTATGTTTGTAAGGAAAAATTGTTGTAGGTGGCTGCACAATCTGCTTGTGTTCTATCATAGCCCATCTTCCATTTGTTGTTTCAACCACACCAGGTTCACCTTGGTGAAGAAAGAAAATGTTTTGGGGGATTTTGGCGCGCAAAGTTGAGTTGGTAATTATTATAGAAGTGGAGTAATTGGGATAGTTGACTTGAATAATGAGGTGATAAATAGGTGGGTTCAATAACCACTCTCTTTAATTATTAGCAAACCAAACAGTGGGTGAGTTCTTTTACCCACCCAACCCAACCTAACTTGGGGGACCAAACACCCCAGGACTAAAATTTCTTTCTTTTTCCCACTAATCTTCTCTTGCAAGTATGTATGCATTAGAATAGTTTTGATCAAATGGAAAGTGTAGACCTAAGCATATAGTTCAAATAGGAAATATATTTGCATTAGAATAGTTTGACCAAGCAAGTTTTTTATAGTTCAAAATCTTTGTTCTCCTGAAGTTCTTCTTTTGATGGATGAAATTCTTTGAGATCAGTGGAGTGTGCACTGACCATAATGTGAGGGAGATCCTTCGGAACCCTTTTTTATTAGAAAAAGAATGGAAGTTTAAAGACTCATTCATAATGTTTGTTCAATGTTCAATGAATAGTATGAAAGACTGCCATCAGACCATGTTGTGATCTCAATGTTCCTTGTCTTGCAGGGTTGAGGAAACAAGAAAAAATGAGGCAGATTCTTCAAATCCTCGTCAACGTATTCTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACATTCCTTCTTCTCCGCGGGTTGAAGATCCAGAGGCTATGGTGAAGGTTGGGCCAGCTATGGTATATTGCCCTCTCACAACCAGTCAAGAGTGGGATGATATAGTATCTGCCACCAAAACTGGAGTTTCCCTCACTGGGACTGCAGCCATGGGAAAAGTTGGACCAGTCATTGGACGTGTAGACATTGGCGAGAACGAGAATTCATACTTCTTTCGCGTATCTCTTCCAGGGGTTGCTAGAGATCAAAGTGAGTGTTTGTTGAAACTGATCAATTTTCTCTCATTTTGCTACCCTAATGTGCAGCGTTAATGTTATCCTAACAATACAGGTACACGATTAGTTCTCTTATCTGACCAGACTATTCTTTAATGGCAGCAGACAGTTTCAGCTGCGACATGGAACCGGATGGGCAAGTGAAAATAAGAGGAGTAACAACAACAGGGGAGAACATAGTTTGTAAGAATTCACAAATATTTCGGATGCAATCGAAAAATCTATGCCCGCCAGGTCACTTCTCTATCACTTTCCGGTTACCTGGCCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCAGATGGGATTTTAGAAGGGAGTGTAGCTAAAAGGTGATTTAACAGGCTTAAATGATTTGTTTTGGGGTGTTAATGGGTTAGAATACAGAGATGATTGTTGGCTCATTTTGTTATGCTAGGTTTAGGAAAAGGCCTTTATGTGGAAAGAAAACTATTTTTTAGGAAACATGGGCTATTAGGAAAGTCGTTAACTCATTTTTTTGTCTCTCATTCCTCTAGAAGGAGATCCTTTGAAAGGATCAGCTTTTATTTTCTTGACGAAGGTCCCAG ATGACTTCTCCGGCTAGGGTTGAGGAAACAAGAAAAAATGAGGCAGATTCTTCAAATCCTCGTCAACGTATTCTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACATTCCTTCTTCTCCGCGGGTTGAAGATCCAGAGGCTATGGTGAAGGTTGGGCCAGCTATGGTATATTGCCCTCTCACAACCAGTCAAGAGTGGGATGATATAGTATCTGCCACCAAAACTGGAGTTTCCCTCACTGGGACTGCAGCCATGGGAAAAGTTGGACCAGTCATTGGACGTGTAGACATTGGCGAGAACGAGAATTCATACTTCTTTCGCGTATCTCTTCCAGGGGTTGCTAGAGATCAAACAGACAGTTTCAGCTGCGACATGGAACCGGATGGGCAAGTGAAAATAAGAGGAGTAACAACAACAGGGGAGAACATAGTTTGTAAGAATTCACAAATATTTCGGATGCAATCGAAAAATCTATGCCCGCCAGGTCACTTCTCTATCACTTTCCGGTTACCTGGCCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCAGATGGGATTTTAGAAGGGAGTGTAGCTAAAAGGTGA ATGACTTCTCCGGCTAGGGTTGAGGAAACAAGAAAAAATGAGGCAGATTCTTCAAATCCTCGTCAACGTATTCTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACATTCCTTCTTCTCCGCGGGTTGAAGATCCAGAGGCTATGGTGAAGGTTGGGCCAGCTATGGTATATTGCCCTCTCACAACCAGTCAAGAGTGGGATGATATAGTATCTGCCACCAAAACTGGAGTTTCCCTCACTGGGACTGCAGCCATGGGAAAAGTTGGACCAGTCATTGGACGTGTAGACATTGGCGAGAACGAGAATTCATACTTCTTTCGCGTATCTCTTCCAGGGGTTGCTAGAGATCAAACAGACAGTTTCAGCTGCGACATGGAACCGGATGGGCAAGTGAAAATAAGAGGAGTAACAACAACAGGGGAGAACATAGTTTGTAAGAATTCACAAATATTTCGGATGCAATCGAAAAATCTATGCCCGCCAGGTCACTTCTCTATCACTTTCCGGTTACCTGGCCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCAGATGGGATTTTAGAAGGGAGTGTAGCTAAAAGGTGA
BLAST of CSPI02G03780.1 vs. Swiss-Prot
Match: IDM2L_ARATH (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22.3 PE=1 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 3.9e-57 Identity = 112/205 (54.63%), Postives = 156/205 (76.10%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. Swiss-Prot
Match: IDM2_ARATH (Increased DNA methylation 2 OS=Arabidopsis thaliana GN=IDM2 PE=1 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.1e-30 Identity = 62/107 (57.94%), Postives = 84/107 (78.50%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. Swiss-Prot
Match: IDM3_ARATH (Increased DNA methylation 3 OS=Arabidopsis thaliana GN=IDM3 PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.0e-25 Identity = 60/137 (43.80%), Postives = 87/137 (63.50%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. TrEMBL
Match: A0A0A0LGB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021590 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 9.2e-114 Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. TrEMBL
Match: Q84KA6_CUCME (Heat shock protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 3.7e-91 Identity = 166/173 (95.95%), Postives = 169/173 (97.69%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. TrEMBL
Match: Q6GX30_CUCME (Hsp2 (Fragment) OS=Cucumis melo GN=Hsp2 PE=2 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 3.1e-77 Identity = 144/151 (95.36%), Postives = 148/151 (98.01%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. TrEMBL
Match: W9QBR8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001971 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 3.7e-62 Identity = 118/188 (62.77%), Postives = 155/188 (82.45%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. TrEMBL
Match: A0A067EWN6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025769mg PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.5e-60 Identity = 117/196 (59.69%), Postives = 152/196 (77.55%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. TAIR10
Match: AT1G54850.1 (AT1G54850.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 222.6 bits (566), Expect = 2.2e-58 Identity = 112/205 (54.63%), Postives = 156/205 (76.10%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. TAIR10
Match: AT1G54840.1 (AT1G54840.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31 Identity = 62/107 (57.94%), Postives = 84/107 (78.50%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. TAIR10
Match: AT1G20870.1 (AT1G20870.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 118.2 bits (295), Expect = 5.8e-27 Identity = 60/137 (43.80%), Postives = 87/137 (63.50%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. TAIR10
Match: AT1G76440.1 (AT1G76440.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 107.8 bits (268), Expect = 7.9e-24 Identity = 59/119 (49.58%), Postives = 76/119 (63.87%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. NCBI nr
Match: gi|778666755|ref|XP_011648803.1| (PREDICTED: uncharacterized protein LOC101211821 isoform X1 [Cucumis sativus]) HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-113 Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. NCBI nr
Match: gi|659070400|ref|XP_008454874.1| (PREDICTED: uncharacterized protein LOC103495185 isoform X1 [Cucumis melo]) HSP 1 Score: 410.2 bits (1053), Expect = 2.1e-111 Identity = 200/205 (97.56%), Postives = 202/205 (98.54%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. NCBI nr
Match: gi|449442837|ref|XP_004139187.1| (PREDICTED: uncharacterized protein LOC101211821 isoform X2 [Cucumis sativus]) HSP 1 Score: 409.1 bits (1050), Expect = 4.7e-111 Identity = 202/205 (98.54%), Postives = 204/205 (99.51%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. NCBI nr
Match: gi|659070402|ref|XP_008454882.1| (PREDICTED: uncharacterized protein LOC103495185 isoform X2 [Cucumis melo]) HSP 1 Score: 401.7 bits (1031), Expect = 7.5e-109 Identity = 198/205 (96.59%), Postives = 201/205 (98.05%), Query Frame = 1
BLAST of CSPI02G03780.1 vs. NCBI nr
Match: gi|28558785|gb|AAO45756.1| (heat shock protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 342.4 bits (877), Expect = 5.4e-91 Identity = 166/173 (95.95%), Postives = 169/173 (97.69%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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