CSPI01G20000.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTTATCCAACTACTCACCTCCAAAACACACCATTCCTTTATATATATCATCCTCTCTCCAAAAATAATTCCCCATTCAAATTCAGCTCCAAAGAGCTCAATTTGAAGGAGGAGAAAAATAAACAAATAATCAAAATGCATGCATATTTTCTCATTATTCCCATCCCCATTCTCCTCCTCCTAACCTCCACTCCCTACGCCGCCGCAGCTCCCTCCATCAGGTCTGACAGAATTCTACAAAAGCAATTCCTTGCCCCTCACAATGCTGCCCGATATGCCCTCCGTTTGTCCCCCTTAGTTTGGGACCCCAAACTGGCTCGCTACGCTCAATCCTACGCCAACAAGCGCCGCGGGGATTGCGCCCTCCGCCATTCTGGGGGTCCTTATGGCGAAAACATCTTCTGGGGTAGCGGCAAGGACTGGACTCCGGCTCAAGCCGTGGCCGATTGGGTGTCCGAGCGCAAATGGTACAGTTATTGGGCAAACTCCTGCGTTGAGGGTGAACTATGTGGTCATTATACTCAAATTGTGTGGCGGTCCACTCGCCGGATTGGATGTGCTAGAGTCACTTGTAATGACGGTAAAGGCGTTTTTATCACTTGCAATTATGATCCTCCGGGTAATTACATTGGGATGAGACCTTATTAAAATTACTCTCTCTCTCTCTATATATATATACAAATATATAAGTAAAAAGGCATTAATTATTGTAGGTATTTTTAAAGGGTTAATTAAATTTGGAGTTTGTATATTATATATTTTGTGGAGTGAAATGGAAGAAGAAAAGAAATTGTTTGTAAAAGTTGTGTTGTTTCATGTCTTTGTCATATTTTCACATGTAATTGATTGATTTTATGTGCTGTATCCCTAATATTTATTATTGTTTTTTTCTTTCTTTTTGGTACTGTCCTATTCAAGGAGTGGTGTATATTTCCATACCCCTCCAAATAAATTTTACATTATTAAATGTATACACCTTTTTGTTTATGGATTCAAATGCTTCTCTTGGAGATTTTTTCTTTCTTTCTTTTTT ATGCATGCATATTTTCTCATTATTCCCATCCCCATTCTCCTCCTCCTAACCTCCACTCCCTACGCCGCCGCAGCTCCCTCCATCAGGTCTGACAGAATTCTACAAAAGCAATTCCTTGCCCCTCACAATGCTGCCCGATATGCCCTCCGTTTGTCCCCCTTAGTTTGGGACCCCAAACTGGCTCGCTACGCTCAATCCTACGCCAACAAGCGCCGCGGGGATTGCGCCCTCCGCCATTCTGGGGGTCCTTATGGCGAAAACATCTTCTGGGGTAGCGGCAAGGACTGGACTCCGGCTCAAGCCGTGGCCGATTGGGTGTCCGAGCGCAAATGGTACAGTTATTGGGCAAACTCCTGCGTTGAGGGTGAACTATGTGGTCATTATACTCAAATTGTGTGGCGGTCCACTCGCCGGATTGGATGTGCTAGAGTCACTTGTAATGACGGTAAAGGCGTTTTTATCACTTGCAATTATGATCCTCCGGGTAATTACATTGGGATGAGACCTTATTAA ATGCATGCATATTTTCTCATTATTCCCATCCCCATTCTCCTCCTCCTAACCTCCACTCCCTACGCCGCCGCAGCTCCCTCCATCAGGTCTGACAGAATTCTACAAAAGCAATTCCTTGCCCCTCACAATGCTGCCCGATATGCCCTCCGTTTGTCCCCCTTAGTTTGGGACCCCAAACTGGCTCGCTACGCTCAATCCTACGCCAACAAGCGCCGCGGGGATTGCGCCCTCCGCCATTCTGGGGGTCCTTATGGCGAAAACATCTTCTGGGGTAGCGGCAAGGACTGGACTCCGGCTCAAGCCGTGGCCGATTGGGTGTCCGAGCGCAAATGGTACAGTTATTGGGCAAACTCCTGCGTTGAGGGTGAACTATGTGGTCATTATACTCAAATTGTGTGGCGGTCCACTCGCCGGATTGGATGTGCTAGAGTCACTTGTAATGACGGTAAAGGCGTTTTTATCACTTGCAATTATGATCCTCCGGGTAATTACATTGGGATGAGACCTTATTAA
BLAST of CSPI01G20000.1 vs. Swiss-Prot
Match: PR1_MEDTR (Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 7.7e-59 Identity = 102/162 (62.96%), Postives = 122/162 (75.31%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.5e-49 Identity = 85/161 (52.80%), Postives = 116/161 (72.05%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. Swiss-Prot
Match: PR1_HORVU (Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.5e-49 Identity = 86/161 (53.42%), Postives = 115/161 (71.43%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 4.2e-49 Identity = 84/161 (52.17%), Postives = 116/161 (72.05%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. Swiss-Prot
Match: PRMS_MAIZE (Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.2e-48 Identity = 85/160 (53.12%), Postives = 108/160 (67.50%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. TrEMBL
Match: A0A0A0LWR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G420610 PE=3 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 1.8e-99 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. TrEMBL
Match: A0A061GQH8_THECC (STS14 protein, putative OS=Theobroma cacao GN=TCM_038873 PE=3 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 3.0e-62 Identity = 113/161 (70.19%), Postives = 124/161 (77.02%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. TrEMBL
Match: A0A0D2P9J9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G101200 PE=3 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 2.6e-61 Identity = 110/161 (68.32%), Postives = 124/161 (77.02%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. TrEMBL
Match: B9T2E4_RICCO (STS14 protein, putative OS=Ricinus communis GN=RCOM_0078380 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 3.4e-61 Identity = 114/176 (64.77%), Postives = 131/176 (74.43%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. TrEMBL
Match: A0A0B2RRC7_GLYSO (Pathogenesis-related protein PR-1 OS=Glycine soja GN=glysoja_032970 PE=3 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 5.7e-61 Identity = 106/161 (65.84%), Postives = 120/161 (74.53%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. TAIR10
Match: AT4G30320.1 (AT4G30320.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 212.6 bits (540), Expect = 1.9e-55 Identity = 90/136 (66.18%), Postives = 109/136 (80.15%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. TAIR10
Match: AT4G25790.1 (AT4G25790.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 199.5 bits (506), Expect = 1.6e-51 Identity = 85/136 (62.50%), Postives = 101/136 (74.26%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. TAIR10
Match: AT5G57625.1 (AT5G57625.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 198.4 bits (503), Expect = 3.7e-51 Identity = 83/137 (60.58%), Postives = 101/137 (73.72%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. TAIR10
Match: AT4G25780.1 (AT4G25780.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 193.4 bits (490), Expect = 1.2e-49 Identity = 84/138 (60.87%), Postives = 106/138 (76.81%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. TAIR10
Match: AT4G31470.1 (AT4G31470.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 173.3 bits (438), Expect = 1.3e-43 Identity = 85/177 (48.02%), Postives = 103/177 (58.19%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. NCBI nr
Match: gi|449457129|ref|XP_004146301.1| (PREDICTED: pathogenesis-related protein PR-1-like [Cucumis sativus]) HSP 1 Score: 369.8 bits (948), Expect = 2.6e-99 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. NCBI nr
Match: gi|659107363|ref|XP_008453637.1| (PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo]) HSP 1 Score: 327.0 bits (837), Expect = 1.9e-86 Identity = 158/172 (91.86%), Postives = 160/172 (93.02%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. NCBI nr
Match: gi|1009105492|ref|XP_015875903.1| (PREDICTED: pathogenesis-related protein PR-1 [Ziziphus jujuba]) HSP 1 Score: 255.0 bits (650), Expect = 9.4e-65 Identity = 109/137 (79.56%), Postives = 118/137 (86.13%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. NCBI nr
Match: gi|470120665|ref|XP_004296418.1| (PREDICTED: pathogenesis-related protein PR-1-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 250.0 bits (637), Expect = 3.0e-63 Identity = 115/163 (70.55%), Postives = 129/163 (79.14%), Query Frame = 1
BLAST of CSPI01G20000.1 vs. NCBI nr
Match: gi|590580677|ref|XP_007014137.1| (STS14 protein, putative [Theobroma cacao]) HSP 1 Score: 246.1 bits (627), Expect = 4.4e-62 Identity = 113/161 (70.19%), Postives = 124/161 (77.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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