CSPI01G16630.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATGGAGTTGAAGTTAAGAACCAAAAGATACTTTTCCTTTTAATAGATGAGAAGAATCATCAAAGGGTATATCTGTAATTAATAGGCAAGTTGACGTGGCAAAATCCTGGTGGGTCATACCGTGAGGATTTGGTGGGGGTTATTCTAGACCGTTCCGCAGAGTATAATCAGAATCGGCACCGCGAACGAACAGGGAACTTCGGCCGAGTTGGTAAAGAGAGAGATAGAAAAAAGCAGAAGTATAATTGTGAGAACAGAACTGTAGAGTTTTGAAAGCGACTTTTTGGCCGCAAATTGGAGGAGACGAGGTTCCAAGGCTCTCTCCCTAATGATCTCTCTCTCTTTATCTTTCAATTTCCTTCTCTAACGGATTCGGACCATCGGAATTTGTTAATTTCACCATGTCTTGGTTTTTCAAGTCTTTCCAAGCCACCGATGATGGTATCTCAACGCAATCGCACTTTAACGCTTCTTCTTCGCCATCGGAATGCGTTCGTTTCACCACTGCTGACGATCCTTCTGTTGACAACGATTTCTCCGCATTCGGTGAGACGCTGAGCCGTCAGCTACGCGGCTTCGCTAACTTTCTCGCTCCACAACCGTCGCCGACGCCGACTGTCGTTTCTGCCGCTGATTCTTCCTATTCGAGTTCGAATTCTTCGTCGCCGTCTCAAACGCTTCAGGGAATTCGCAATGATCTCGCTGAGATTGGCGGTGGCTTGAGGAACGGCTTCTCGATGCTCTCTGTTAATGGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTGCTAACTTGCTACCGTTTCGGAAACGTTCTGCCGATTATGAAGAAGACGACGAATTGGAAGACGAGGCTATTGATGATACACCGGGAATCACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTTGCGGCCGAAGTACTGGATGAATTTTCCTTTGGCGCTTGATGAAGCAGGTAAATCCAAAATCTCTGGCTCTTAATATTTGTGATAATGCTAAGTTAAAATAAATGTCTGTTTAATCATTGACCAGTGAATTTGGTATAAGATAGAGATTAGACTAAGAACATTACGCAGACCAAATAGCATGCTCCTTTTTCTTTTCTTCTTTTTTTCTTTCTATTTCTGCTCATTCATCTGATTTTTTTTTTTTTTCAATTTGAAATTATGTTGGTACATTGTGCTTCATAATAATATGAATTAATTCAAATGCTTGGAGTTCCCATCTTTTTAGAAAGAAGTAGCGAGGGGCATTGGTTACTTTTATTTGAGGAATATGTCATCCCAGAACTCTTTTATGTGTTTGTTCAAATATATTTCTTACTATAATAGTTCAATGATAAATTAGGAACTAACACTTTCTCCATTCAATAAGATGTCAATTATGATTATGACTAATCTAGTTCAGTCATGATATACAGTAAGCACTCATCTGAAATTTGAATGTTTACATTTCAAGAATTGATTACTGGATGTATTGAACAATTATCATCGTAACTGATTTCGTCTACCATCTTCAATTATTGGATGTGTATATACTGATTTCTAAGAGGTAGATGAGGCATATTCCTACTCTGCCTAATCCAGGCTGTATTTACTGTTTTCTGTCATCTACCCTTCCATAACTAGAAGACAAGAATAATTGGAGAACCTTTTCTAGAAAATACTTAAGCCTTTTCCATGGAAAGCATGTATTTGTGCCATTTCACATCCCTCGTTGTGGAACACAATTTATGGGTGTCAACCTCTATATTGCTTTTCATTCTCATTTTAATGATTTCATATAGCCTGAGGACTTAGATATGATACCTCCCCATATGGTTAGCAACTAACTATAATGACAACTACGTTAAATTGGCATTGCTAGTTGAGTCAGCATCAAAATCCATTGAATATTTTTTACTTTATGCCAATCACTACAAGTTTTTCTTGTTTGGTGGTGGTAACTATTGATAAATATTTTACGTTTGACGCCTATTATTATATTGATCAGCCTTCAATTATTGTTTACTATCAGCATAATACTTTGATTAGCTTTATTGCAGATTTTAAAATGTCTGACGTTCAAAGAATGCACATTTCAACTGTTGAGCAATTGGTTCCAAGCATATCAGCTCTTAAAATAAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTCTTGCTTCCAAGATTCAACCAATCTGATTTTGAGCTTCTCGCAACATCTGAAGTAAGATTCATTTCCTTTTCCGTACTCTGCATTTTTTGGTTGTTTGGTGTTTATTATGAGTATGGCTTATGAGTAATGTCTAAGTAAATATTTAGGACTGATTTCAAAATGGTTAAAACTGTTTTTGTTGTGTTCAAAACTAATTCAACTTTATTTTTACAAATGCAAGCACAATTTTTCATATTATTAAGATTGACTTTGAATGACCAAAAGAATTTTCAAATTGATTTAAACAAATCAGTCTCAAGCATGTCATAACTAATTCAACGTTATTTTTGCTTTTATTTGTGTTGTGTGCACACATTACTGTATTTCAAGTTCCTCTTGTGCTGCTTATTATCGCAGTGTCATAACTTTTGTTTTCCTTTTCTTTTGAATGGTACATTTTTTTCCCATGGTAGATAAAGGCTAAATACTTGGATATTATATTCTAAATTGAATACCAGTATGTATGTTAACATCTATGTGATGGTGAGATCACCACAAGCAAAAAATCCACCCTCATTTGAGAGAGACCATAATGATTAGCCATATTGAAATTGATCTATACTTGCTGGATTTTTTAGGGAAGGATACGAAACATTCATTAAGGGAATGAAAAGAGGTGGGTGCCCTAAGATACACAAGGATATAACAAAACATAGCGTAGATGAAAAAGCCACAAAGTAACACTTGAATCCATAGTTTAGTTTGATCTTTCTGCTCTGTTGATTTGATTTACTTCCAATAATTAAATAATTAATGGTTATATTCAGTTTTTAGTATGATTGTTAAGAAAAATGAAATGAGACCATTTATTTTGGCTTATAATTAAAACTATCTTTAAAAATCAAAGAAACTAAACAACAAAGAAACAAAATTTAAAGATTAAGATCATTAAAATTTCAGTTTATTTGAAGAACCAGATTAGTTGAACGGAAAACTAACCAGTTGGATTCAAATCAAACTACACTTTTTGATGGTTAAGTTCAGTTGTAGTACTTATGACTGATGAGTGTGCCTAAGGTGTGGCAAATGATCTCATCATAACTTGTGTTTTGTTAAAAGAAAGAAATTTCAGTTATAGTACATAAAATTACCTAGGATTTAGGCTTAAATTGTTGGAGGGAAACAAATCTGAATTGCATTAGTTCCTCTCCTATTGGATTCATTCTGAACATGACAACCATTTAACCATTTCCAAATATTGCTGTTCATCGTTTGAGTTGATTTCTTCTTTGTCTCTGTCTCAAACGTTTCCTTTGGAGCATATTTTATTTAAGACTTGCAATCAAATTCAAGTCCCCACACACACATCTTTATTCAGATATATTCTACCTGAAGCTTGAGACTATTATTAAAGCTGACATATCTTTATTCTTTTTTTGGCAGATTGTCGAAGCAAGAAACATACTTCTGGATAAACTCCAAAGGAAAGAGAAACCACAAGTGAATTCTGAGAATAGTTGTGATAACAATGTGGTTTGTGACACCCAACAAAAGGAGGAAAATACGGTATCCGAGGAAAAGCCAAACTCCACTCAAATAATTGAAGGATTGGAAACTGAGGATGGAGATCGAGGGAATACCAATCAACGATTGGCAAAGAGAGATTCAGAAATTTATAAAGCCGCCAAAAAAAGGGTTATTAGGGTCGAAGATGTCTCATTCAGTGATATAGAAGAAGAGGATGATGAGAGAAACCACTCACAAAGGATTTCTTCATCAACCGAATCTAGTGATTGGGTTCAGCTGCATGAAAGTCAAGACTCAAAAGAAGGTGGGGATTCGAGTGATTGGTTTGATGTGGATGAATTTGATTAAAAGATGGACATAATCATTAGGAGATCTTCGTTTTTCTCCAAACTTGCTTTTCTTTGCGTTAGAGTGCCATAAGGCTTTTTATAGTTTAGGTCTTTATTTTTTTT ATGTCTTGGTTTTTCAAGTCTTTCCAAGCCACCGATGATGGTATCTCAACGCAATCGCACTTTAACGCTTCTTCTTCGCCATCGGAATGCGTTCGTTTCACCACTGCTGACGATCCTTCTGTTGACAACGATTTCTCCGCATTCGGTGAGACGCTGAGCCGTCAGCTACGCGGCTTCGCTAACTTTCTCGCTCCACAACCGTCGCCGACGCCGACTGTCGTTTCTGCCGCTGATTCTTCCTATTCGAGTTCGAATTCTTCGTCGCCGTCTCAAACGCTTCAGGGAATTCGCAATGATCTCGCTGAGATTGGCGGTGGCTTGAGGAACGGCTTCTCGATGCTCTCTGTTAATGGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTGCTAACTTGCTACCGTTTCGGAAACGTTCTGCCGATTATGAAGAAGACGACGAATTGGAAGACGAGGCTATTGATGATACACCGGGAATCACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTTGCGGCCGAAGTACTGGATGAATTTTCCTTTGGCGCTTGATGAAGCAGATTTTAAAATGTCTGACGTTCAAAGAATGCACATTTCAACTGTTGAGCAATTGGTTCCAAGCATATCAGCTCTTAAAATAAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTCTTGCTTCCAAGATTCAACCAATCTGATTTTGAGCTTCTCGCAACATCTGAAATTGTCGAAGCAAGAAACATACTTCTGGATAAACTCCAAAGGAAAGAGAAACCACAAGTGAATTCTGAGAATAGTTGTGATAACAATGTGGTTTGTGACACCCAACAAAAGGAGGAAAATACGGTATCCGAGGAAAAGCCAAACTCCACTCAAATAATTGAAGGATTGGAAACTGAGGATGGAGATCGAGGGAATACCAATCAACGATTGGCAAAGAGAGATTCAGAAATTTATAAAGCCGCCAAAAAAAGGGTTATTAGGGTCGAAGATGTCTCATTCAGTGATATAGAAGAAGAGGATGATGAGAGAAACCACTCACAAAGGATTTCTTCATCAACCGAATCTAGTGATTGGGTTCAGCTGCATGAAAGTCAAGACTCAAAAGAAGGTGGGGATTCGAGTGATTGGTTTGATGTGGATGAATTTGATTAA ATGTCTTGGTTTTTCAAGTCTTTCCAAGCCACCGATGATGGTATCTCAACGCAATCGCACTTTAACGCTTCTTCTTCGCCATCGGAATGCGTTCGTTTCACCACTGCTGACGATCCTTCTGTTGACAACGATTTCTCCGCATTCGGTGAGACGCTGAGCCGTCAGCTACGCGGCTTCGCTAACTTTCTCGCTCCACAACCGTCGCCGACGCCGACTGTCGTTTCTGCCGCTGATTCTTCCTATTCGAGTTCGAATTCTTCGTCGCCGTCTCAAACGCTTCAGGGAATTCGCAATGATCTCGCTGAGATTGGCGGTGGCTTGAGGAACGGCTTCTCGATGCTCTCTGTTAATGGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTGCTAACTTGCTACCGTTTCGGAAACGTTCTGCCGATTATGAAGAAGACGACGAATTGGAAGACGAGGCTATTGATGATACACCGGGAATCACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTTGCGGCCGAAGTACTGGATGAATTTTCCTTTGGCGCTTGATGAAGCAGATTTTAAAATGTCTGACGTTCAAAGAATGCACATTTCAACTGTTGAGCAATTGGTTCCAAGCATATCAGCTCTTAAAATAAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTCTTGCTTCCAAGATTCAACCAATCTGATTTTGAGCTTCTCGCAACATCTGAAATTGTCGAAGCAAGAAACATACTTCTGGATAAACTCCAAAGGAAAGAGAAACCACAAGTGAATTCTGAGAATAGTTGTGATAACAATGTGGTTTGTGACACCCAACAAAAGGAGGAAAATACGGTATCCGAGGAAAAGCCAAACTCCACTCAAATAATTGAAGGATTGGAAACTGAGGATGGAGATCGAGGGAATACCAATCAACGATTGGCAAAGAGAGATTCAGAAATTTATAAAGCCGCCAAAAAAAGGGTTATTAGGGTCGAAGATGTCTCATTCAGTGATATAGAAGAAGAGGATGATGAGAGAAACCACTCACAAAGGATTTCTTCATCAACCGAATCTAGTGATTGGGTTCAGCTGCATGAAAGTCAAGACTCAAAAGAAGGTGGGGATTCGAGTGATTGGTTTGATGTGGATGAATTTGATTAA
BLAST of CSPI01G16630.1 vs. TrEMBL
Match: A0A0A0LYR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G226440 PE=4 SV=1) HSP 1 Score: 738.4 bits (1905), Expect = 4.5e-210 Identity = 389/392 (99.23%), Postives = 390/392 (99.49%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. TrEMBL
Match: A0A067KEJ6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17026 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 5.9e-69 Identity = 190/436 (43.58%), Postives = 251/436 (57.57%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. TrEMBL
Match: B9T129_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0271970 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 6.7e-65 Identity = 179/424 (42.22%), Postives = 246/424 (58.02%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. TrEMBL
Match: A0A061GVR9_THECC (BSD domain-containing protein, putative OS=Theobroma cacao GN=TCM_038160 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.5e-59 Identity = 175/423 (41.37%), Postives = 231/423 (54.61%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. TrEMBL
Match: M5W5I9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020061mg PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 7.2e-59 Identity = 170/428 (39.72%), Postives = 236/428 (55.14%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. TAIR10
Match: AT2G10950.1 (AT2G10950.1 BSD domain-containing protein) HSP 1 Score: 162.5 bits (410), Expect = 5.1e-40 Identity = 132/359 (36.77%), Postives = 179/359 (49.86%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. TAIR10
Match: AT3G49800.1 (AT3G49800.1 BSD domain-containing protein) HSP 1 Score: 121.3 bits (303), Expect = 1.3e-27 Identity = 117/386 (30.31%), Postives = 177/386 (45.85%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. TAIR10
Match: AT5G65910.1 (AT5G65910.1 BSD domain-containing protein) HSP 1 Score: 120.9 bits (302), Expect = 1.7e-27 Identity = 114/400 (28.50%), Postives = 195/400 (48.75%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. TAIR10
Match: AT1G10720.1 (AT1G10720.1 BSD domain-containing protein) HSP 1 Score: 109.4 bits (272), Expect = 5.2e-24 Identity = 80/233 (34.33%), Postives = 128/233 (54.94%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. NCBI nr
Match: gi|449465633|ref|XP_004150532.1| (PREDICTED: uncharacterized protein LOC101209318 [Cucumis sativus]) HSP 1 Score: 738.4 bits (1905), Expect = 6.4e-210 Identity = 389/392 (99.23%), Postives = 390/392 (99.49%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. NCBI nr
Match: gi|659086458|ref|XP_008443945.1| (PREDICTED: uncharacterized protein LOC103487415 [Cucumis melo]) HSP 1 Score: 662.5 bits (1708), Expect = 4.5e-187 Identity = 353/396 (89.14%), Postives = 368/396 (92.93%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. NCBI nr
Match: gi|802666237|ref|XP_012081187.1| (PREDICTED: uncharacterized protein LOC105641285 [Jatropha curcas]) HSP 1 Score: 269.6 bits (688), Expect = 8.5e-69 Identity = 190/436 (43.58%), Postives = 251/436 (57.57%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. NCBI nr
Match: gi|255582315|ref|XP_002531948.1| (PREDICTED: uncharacterized protein LOC8272211 [Ricinus communis]) HSP 1 Score: 256.1 bits (653), Expect = 9.7e-65 Identity = 179/424 (42.22%), Postives = 246/424 (58.02%), Query Frame = 1
BLAST of CSPI01G16630.1 vs. NCBI nr
Match: gi|645275455|ref|XP_008242822.1| (PREDICTED: uncharacterized protein LOC103341120 [Prunus mume]) HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60 Identity = 176/428 (41.12%), Postives = 239/428 (55.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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