CSPI07G22170 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTTCTTGAATTCCAAACTCCATTTTCCCATCGCTTTTGCTGCAAACAGATCTGTACGCTTTATACTTTAAAACGATTCTGCTTTTTCCTTCTCTTCCTCGCTATCTTTTCAATCATCGCCATTGCAATCGCCGCTTTGCCTGTAATTTTCTTGTTGAAGCCTCGAGAACCCATTTTTTCTCTCCATTCAGTGCGATTGGATTGGTACAACATTACCATCAGATCTGGATCTCCAATTCTCTCATCTGTTTTCACTCTGACTCTCAATTCCCAAAACCCTAACAAACTCGGAATCAAGTACAGCCCGTCAAGGCTTCTCTTGATCTACGATGAATCCGCCGTGATCGGAACGATTCGAGTCCCGGAAGTGTTCCAGCCTGCTCGTAGCGGGGAACGGATTGTTCGAACCCGTCTGTTGTTGCATCAATTGGATGTGGATTTGTTGGAGACGACGAGAGAATTTGTTGAAATGAAAATTATTGGTGATGTTGGTGTAGAGCTGTTTGTGCTTCACATGAAGGTGATTAAGATGAAGGTGAGGGTTCTCTTTTCTTCCTCTCTTTCTTTCTAACAATCAATTATACTCATAAACCTACAAAATTTACAATTGAGCCTTAAACTTACCTAAATTTTAAAATAAAACGCTTAAATTTGAGGTATTTTCAAATATAGTAAATAAAACAATAAAATTTTAGTTTTTATTATAAATAGATGACAATTTTGTACATTTTATAAATATTTTCAATGATTTGACATTTATAACAATTTTTTATTTGAAAATTCAATTATATCGTCGTTGGATTAAATTTTTACGATTATCATGAGTACGAGATTCAATTTCAACAATTTTAAATGTTTAGAGGTTCAATTGTTATTATTAAAAGTTTATAGATGCCATGGTTGTGATTTTTGCGATTTGAAAAAGAGGGTATTTTCAAATAAAGTAAATAAAACAAAGTATTTATAAAATACAACAAGATTTTATATTATATTAGAAGTTGATGATAATATTGTTTAATTTGTAAATACTTTCACCCGTATCAAATTTACAACCATTTTTTTGTTTGAAAATTTGTTGGATTCAACTTTTACTGTTACGGGAAGTTTGAAATAATGTTTAGGGATTTAATTGTTATTATGGAAAGTTTGTGGGTAATTAACACTAGGATTTTGCAATTTGGAAGTTGGATGTTCTTGTTTGATGGGAGATGGAGTTTGGGTTAATTTGAGATGAATGAAGGTTGAATTAATGAAGAATTTTGGTTGTAGGTTGCTTTGAAATGCGATGTGGATATTGATTACAGAAAGCTTAATTTCAGAGAAGAAATACTTGGCAATGGAGAATCTGTAGGAAAAGCTTTGGTATGTGCTCTCTCCTTTGTAATAAATCAAATTGCAACTTAAAAGAAAAAGAGCACCTCTAACAACAAAAACTAAGAAATATAGTAAAATTATGGGTTGTCGATCGTAACTTAGACGTTAGACGTAGATGAGAGTCTATCACACTAAAATAGTAATATTATCATTTTTAGGGTAACAATTTTTTGTCTTAATTTTCGTATTAAGTCTTAGTTTATGTAATTTTTAAAAAGAAATATGAAGATTTTTTTAAAAAAACAAATAGAAAATTCATGTATAAGAAAAGATGGTAGAAAATTTAGAGCCAATAATAGGAAAGACTAAAGAAAGTTTAAGCAAATAAGTAATTGATTTACACATTTTCATTGGATAAAATTATAATAATTGGAGTTAGTTTATTTTTCTTAATAAAGGGAACTCCACAAGCAAACATTGGTAAAAATATAAAAAGAATTTATGTTTATTAATAAAAGAAATAATAGAAAGAAAAAAGAATTGAAACTATTTTTCGTAAATATTTGTTTTTCATCGTTCACAAAAGTTTCTCGATAAAATTAGCTATGCAATTTGTTAACAATATTTATAAACAAACAAAAAAAAAAATTCAAAACAGTATATTTTACAAAATATTTACACCTCCAAAAATCAAATATGTTTTGTATATATTTTTTTTGTTTGAGTTTAAATAATTTGTTCTTTTTTAAAAAAACTAAAAAAAAATAAGAGAATTTTTTTAAAATAGTAAAATAAATTAAAATATTTACACTAAAACAAAATTTTAGATTTTATCAATAATATTCTTCTACCAGTGTATCGTAACAAAGGTTGTAGATATTATTATTTTTTAAAAAAAATTCTAGAAGATTTTTCAAAAATTAAATGAATTAAAAATTAATTTAATTTTCTTAATTTTCAGGATTCAATTCCTTCAAACTCCAAGACAATGTCTTCAAAGTGTGGGATCGCTTTTTACTTATGAAAGTGCTTATAAGTAATTACTTATAACTAACAAGTAATTACTTGTTAAGTATTTTGTTTAGTATCTTTTGG ATGGATGTTCTTGAATTCCAAACTCCATTTTCCCATCGCTTTTGCTGCAAACAGATCTGTACGCTTTATACTTTAAAACGATTCTGCTTTTTCCTTCTCTTCCTCGCTATCTTTTCAATCATCGCCATTGCAATCGCCGCTTTGCCTGTAATTTTCTTGTTGAAGCCTCGAGAACCCATTTTTTCTCTCCATTCAGTGCGATTGGATTGGTACAACATTACCATCAGATCTGGATCTCCAATTCTCTCATCTGTTTTCACTCTGACTCTCAATTCCCAAAACCCTAACAAACTCGGAATCAAGTACAGCCCGTCAAGGCTTCTCTTGATCTACGATGAATCCGCCGTGATCGGAACGATTCGAGTCCCGGAAGTGTTCCAGCCTGCTCGTAGCGGGGAACGGATTGTTCGAACCCGTCTGTTGTTGCATCAATTGGATGTGGATTTGTTGGAGACGACGAGAGAATTTGTTGAAATGAAAATTATTGGTGATGTTGGTGTAGAGCTGTTTGTGCTTCACATGAAGGTGATTAAGATGAAGGTTGCTTTGAAATGCGATGTGGATATTGATTACAGAAAGCTTAATTTCAGAGAAGAAATACTTGGCAATGGAGAATCTGTAGGAAAAGCTTTGGATTCAATTCCTTCAAACTCCAAGACAATGTCTTCAAAGTGTGGGATCGCTTTTTACTTATGA ATGGATGTTCTTGAATTCCAAACTCCATTTTCCCATCGCTTTTGCTGCAAACAGATCTGTACGCTTTATACTTTAAAACGATTCTGCTTTTTCCTTCTCTTCCTCGCTATCTTTTCAATCATCGCCATTGCAATCGCCGCTTTGCCTGTAATTTTCTTGTTGAAGCCTCGAGAACCCATTTTTTCTCTCCATTCAGTGCGATTGGATTGGTACAACATTACCATCAGATCTGGATCTCCAATTCTCTCATCTGTTTTCACTCTGACTCTCAATTCCCAAAACCCTAACAAACTCGGAATCAAGTACAGCCCGTCAAGGCTTCTCTTGATCTACGATGAATCCGCCGTGATCGGAACGATTCGAGTCCCGGAAGTGTTCCAGCCTGCTCGTAGCGGGGAACGGATTGTTCGAACCCGTCTGTTGTTGCATCAATTGGATGTGGATTTGTTGGAGACGACGAGAGAATTTGTTGAAATGAAAATTATTGGTGATGTTGGTGTAGAGCTGTTTGTGCTTCACATGAAGGTGATTAAGATGAAGGTTGCTTTGAAATGCGATGTGGATATTGATTACAGAAAGCTTAATTTCAGAGAAGAAATACTTGGCAATGGAGAATCTGTAGGAAAAGCTTTGGATTCAATTCCTTCAAACTCCAAGACAATGTCTTCAAAGTGTGGGATCGCTTTTTACTTATGA
BLAST of CSPI07G22170 vs. TrEMBL
Match: A0A0A0K6V0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G448120 PE=4 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 1.6e-122 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of CSPI07G22170 vs. TrEMBL
Match: M5XE58_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015682mg PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 4.3e-35 Identity = 88/199 (44.22%), Postives = 127/199 (63.82%), Query Frame = 1
BLAST of CSPI07G22170 vs. TrEMBL
Match: W9QTR0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002476 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30 Identity = 84/195 (43.08%), Postives = 127/195 (65.13%), Query Frame = 1
BLAST of CSPI07G22170 vs. TrEMBL
Match: A0A061GDY2_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative OS=Theobroma cacao GN=TCM_029230 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.4e-30 Identity = 80/216 (37.04%), Postives = 129/216 (59.72%), Query Frame = 1
BLAST of CSPI07G22170 vs. TrEMBL
Match: B9T4S1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0044190 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 5.4e-30 Identity = 83/201 (41.29%), Postives = 126/201 (62.69%), Query Frame = 1
BLAST of CSPI07G22170 vs. NCBI nr
Match: gi|449448138|ref|XP_004141823.1| (PREDICTED: uncharacterized protein LOC101214000 [Cucumis sativus]) HSP 1 Score: 446.8 bits (1148), Expect = 2.3e-122 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of CSPI07G22170 vs. NCBI nr
Match: gi|659124603|ref|XP_008462250.1| (PREDICTED: uncharacterized protein LOC103500653 [Cucumis melo]) HSP 1 Score: 423.3 bits (1087), Expect = 2.7e-115 Identity = 218/231 (94.37%), Postives = 224/231 (96.97%), Query Frame = 1
BLAST of CSPI07G22170 vs. NCBI nr
Match: gi|802577884|ref|XP_012069228.1| (PREDICTED: uncharacterized protein LOC105631664 [Jatropha curcas]) HSP 1 Score: 159.5 bits (402), Expect = 7.3e-36 Identity = 94/223 (42.15%), Postives = 140/223 (62.78%), Query Frame = 1
BLAST of CSPI07G22170 vs. NCBI nr
Match: gi|595946694|ref|XP_007216171.1| (hypothetical protein PRUPE_ppa015682mg, partial [Prunus persica]) HSP 1 Score: 156.4 bits (394), Expect = 6.2e-35 Identity = 88/199 (44.22%), Postives = 127/199 (63.82%), Query Frame = 1
BLAST of CSPI07G22170 vs. NCBI nr
Match: gi|658035211|ref|XP_008353130.1| (PREDICTED: uncharacterized protein LOC103416679 [Malus domestica]) HSP 1 Score: 151.8 bits (382), Expect = 1.5e-33 Identity = 90/233 (38.63%), Postives = 138/233 (59.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |