CSPI07G17440 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACGGAGGAGAAGCAAGTTATAGTGATCGGAGTCGACGACAGCGAATACGCAACCTACGCTTTAGAATGGACACTCGACCATTTCTTCTCTTCAACGCCAAATCCTCCCTTCAAGCTCGTCGTCGTCTACGCCAAACCGTTTCCCGACGTATTCGTCGGCGTCGGCGGACCTGGAAGTAAGATCAACATTTACAAAATTAGTCTCAAATCCCTGTTCATTGATATATGCTTGGTTTATCGATGCGGTAGTGAATCGAGAAATTGTAATCAGTGATTGTAGGATCTGCGGGAAGTTACCAGTTCCTGAACGAGGATTTGAAGAAGAAAGCAGCGTTGGTCATCGCAACAGCAAGAGGAATCTGCGAATCAAAATCGGTAAGAGGATTTAATATAATTTCTGGATTATTATATGGAATTTTGAATTGAAATGGATTAATTGAGAGAAGTTCGGGGAATTAAATTTGTGTGGAATTCTGTGTTGAGTTTGATTAGATTGTTTGGGATGATGGAATGGGAAAATGTAGGTGAATGATGTGAAATATGAGGTGGATGAAGGAGATGCTAGGTATGTGCTGTGTCAGGCGGTGGAGAAGCATAATGCTTCAATGTTGGTGGTGGGAAGCCATGGCTATGGAGCTCTCAAGAGGTAACTTTATTTAACACGCATTTAAGAGGGAAAGAAGAAGAAGAACAAAGCTAAACGTACTTGTGAAATATTTGGTCCCTAAAAATGTACTATACGTCTAAGAAATTTTGGTCTACTATCAATGCTTAATTTTTTTAAAAAAGATCAATCCACTTAAAAGCCTTTTAAAGAATTGCTCAACTTTATGAACCTATAAAGATTTTTGGTAATTATATTTTTGTTTGCAAACAATTATGTTTAATTAGTCAAAGCCGTAGTAATCACTTTTTTCTTAGAAACCAAGCAATTAGCATTACTTTAGTTGAAGTAGATGGATGATCATATGTGAATGCAGGGCTTTTTTGGGGAGTGTGAGTGACTATTGCGCTCATCAAGCTTCATGTACTGTCATGATTGTCAAGAAACTCAAAACCAAGGAAGGTTAGACACACACAAGTGAATGCAAAACAAATCA ATGGCGACGGAGGAGAAGCAAGTTATAGTGATCGGAGTCGACGACAGCGAATACGCAACCTACGCTTTAGAATGGACACTCGACCATTTCTTCTCTTCAACGCCAAATCCTCCCTTCAAGCTCGTCGTCGTCTACGCCAAACCGTTTCCCGACGTATTCGTCGGCGTCGGCGGACCTGGAAGATCTGCGGGAAGTTACCAGTTCCTGAACGAGGATTTGAAGAAGAAAGCAGCGTTGGTCATCGCAACAGCAAGAGGAATCTGCGAATCAAAATCGGTGAATGATGTGAAATATGAGGTGGATGAAGGAGATGCTAGGTATGTGCTGTGTCAGGCGGTGGAGAAGCATAATGCTTCAATGTTGGTGGTGGGAAGCCATGGCTATGGAGCTCTCAAGAGGGCTTTTTTGGGGAGTGTGAGTGACTATTGCGCTCATCAAGCTTCATGTACTGTCATGATTGTCAAGAAACTCAAAACCAAGGAAGGTTAG ATGGCGACGGAGGAGAAGCAAGTTATAGTGATCGGAGTCGACGACAGCGAATACGCAACCTACGCTTTAGAATGGACACTCGACCATTTCTTCTCTTCAACGCCAAATCCTCCCTTCAAGCTCGTCGTCGTCTACGCCAAACCGTTTCCCGACGTATTCGTCGGCGTCGGCGGACCTGGAAGATCTGCGGGAAGTTACCAGTTCCTGAACGAGGATTTGAAGAAGAAAGCAGCGTTGGTCATCGCAACAGCAAGAGGAATCTGCGAATCAAAATCGGTGAATGATGTGAAATATGAGGTGGATGAAGGAGATGCTAGGTATGTGCTGTGTCAGGCGGTGGAGAAGCATAATGCTTCAATGTTGGTGGTGGGAAGCCATGGCTATGGAGCTCTCAAGAGGGCTTTTTTGGGGAGTGTGAGTGACTATTGCGCTCATCAAGCTTCATGTACTGTCATGATTGTCAAGAAACTCAAAACCAAGGAAGGTTAG
BLAST of CSPI07G17440 vs. Swiss-Prot
Match: PHO32_ARATH (Universal stress protein PHOS32 OS=Arabidopsis thaliana GN=PHOS32 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09 Identity = 45/168 (26.79%), Postives = 77/168 (45.83%), Query Frame = 1
BLAST of CSPI07G17440 vs. Swiss-Prot
Match: PHO34_ARATH (Universal stress protein PHOS34 OS=Arabidopsis thaliana GN=PHOS34 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08 Identity = 47/186 (25.27%), Postives = 71/186 (38.17%), Query Frame = 1
BLAST of CSPI07G17440 vs. Swiss-Prot
Match: Y531_METJA (Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0531 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.4e-06 Identity = 37/115 (32.17%), Postives = 59/115 (51.30%), Query Frame = 1
BLAST of CSPI07G17440 vs. TrEMBL
Match: A0A0A0K987_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397010 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 1.4e-85 Identity = 161/165 (97.58%), Postives = 161/165 (97.58%), Query Frame = 1
BLAST of CSPI07G17440 vs. TrEMBL
Match: V4SIV6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029382mg PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 7.1e-53 Identity = 107/161 (66.46%), Postives = 130/161 (80.75%), Query Frame = 1
BLAST of CSPI07G17440 vs. TrEMBL
Match: B9I9S2_POPTR (Universal stress family protein OS=Populus trichocarpa GN=POPTR_0014s12470g PE=4 SV=2) HSP 1 Score: 208.8 bits (530), Expect = 5.1e-51 Identity = 108/163 (66.26%), Postives = 127/163 (77.91%), Query Frame = 1
BLAST of CSPI07G17440 vs. TrEMBL
Match: V4SDR9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029454mg PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 6.7e-51 Identity = 103/161 (63.98%), Postives = 126/161 (78.26%), Query Frame = 1
BLAST of CSPI07G17440 vs. TrEMBL
Match: A0A067EGJ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030516mg PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 6.7e-51 Identity = 103/161 (63.98%), Postives = 126/161 (78.26%), Query Frame = 1
BLAST of CSPI07G17440 vs. TAIR10
Match: AT2G47710.1 (AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 186.0 bits (471), Expect = 1.8e-47 Identity = 97/162 (59.88%), Postives = 121/162 (74.69%), Query Frame = 1
BLAST of CSPI07G17440 vs. TAIR10
Match: AT1G09740.1 (AT1G09740.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 108.6 bits (270), Expect = 3.6e-24 Identity = 63/156 (40.38%), Postives = 90/156 (57.69%), Query Frame = 1
BLAST of CSPI07G17440 vs. TAIR10
Match: AT3G62550.1 (AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 98.6 bits (244), Expect = 3.8e-21 Identity = 60/165 (36.36%), Postives = 92/165 (55.76%), Query Frame = 1
BLAST of CSPI07G17440 vs. TAIR10
Match: AT5G49050.1 (AT5G49050.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 95.1 bits (235), Expect = 4.2e-20 Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 1
BLAST of CSPI07G17440 vs. TAIR10
Match: AT3G11930.3 (AT3G11930.3 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 92.4 bits (228), Expect = 2.7e-19 Identity = 61/189 (32.28%), Postives = 96/189 (50.79%), Query Frame = 1
BLAST of CSPI07G17440 vs. NCBI nr
Match: gi|778730405|ref|XP_004136170.2| (PREDICTED: uncharacterized protein LOC101202825 [Cucumis sativus]) HSP 1 Score: 323.6 bits (828), Expect = 2.0e-85 Identity = 161/165 (97.58%), Postives = 161/165 (97.58%), Query Frame = 1
BLAST of CSPI07G17440 vs. NCBI nr
Match: gi|700189704|gb|KGN44937.1| (hypothetical protein Csa_7G397010 [Cucumis sativus]) HSP 1 Score: 323.6 bits (828), Expect = 2.0e-85 Identity = 161/165 (97.58%), Postives = 161/165 (97.58%), Query Frame = 1
BLAST of CSPI07G17440 vs. NCBI nr
Match: gi|659101388|ref|XP_008451579.1| (PREDICTED: uncharacterized protein LOC103492817 [Cucumis melo]) HSP 1 Score: 315.5 bits (807), Expect = 5.6e-83 Identity = 157/165 (95.15%), Postives = 159/165 (96.36%), Query Frame = 1
BLAST of CSPI07G17440 vs. NCBI nr
Match: gi|567862184|ref|XP_006423746.1| (hypothetical protein CICLE_v10029382mg [Citrus clementina]) HSP 1 Score: 214.9 bits (546), Expect = 1.0e-52 Identity = 107/161 (66.46%), Postives = 130/161 (80.75%), Query Frame = 1
BLAST of CSPI07G17440 vs. NCBI nr
Match: gi|568868417|ref|XP_006487496.1| (PREDICTED: universal stress protein A-like protein isoform X2 [Citrus sinensis]) HSP 1 Score: 212.6 bits (540), Expect = 5.1e-52 Identity = 106/161 (65.84%), Postives = 129/161 (80.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |