CSPI07G17180 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCTTTGCAGAAGGGACAGCTTCATCACCCACAGAGCCTTTTGCAATGCATTAACAGAAGAAAGCAACAAACTAAAGCAAGGAATTCTCAACAACAACAACAATAACAATAACATAGAACCAATCTCAATTATCTCCACTCCAAAGCTTCCTCATTTTGGCACATCAATCATGCCTGAATTCAACCCTTACGATCAAAAAAACCCTTTCAAAACCCTTCCCCAAGAACTCAACAACTCGACCCCCACCACCACCACAGGTGCACCCGGAGGGTTGTTTATGGTCGGACCCAGAAGCAACAACAATTCTTCCTCTTTCTCAAGCCTTAAGCTCAGCTCCACCACCTCTTCGCGCTTTAGTTGTCTTTATGATAGTAAAAATGGCTGCCTTCAGGTAAGGGCGAAGCAAAGAAGAAATTAA ATGTTTCTTTGCAGAAGGGACAGCTTCATCACCCACAGAGCCTTTTGCAATGCATTAACAGAAGAAAGCAACAAACTAAAGCAAGGAATTCTCAACAACAACAACAATAACAATAACATAGAACCAATCTCAATTATCTCCACTCCAAAGCTTCCTCATTTTGGCACATCAATCATGCCTGAATTCAACCCTTACGATCAAAAAAACCCTTTCAAAACCCTTCCCCAAGAACTCAACAACTCGACCCCCACCACCACCACAGGTGCACCCGGAGGGTTGTTTATGGTCGGACCCAGAAGCAACAACAATTCTTCCTCTTTCTCAAGCCTTAAGCTCAGCTCCACCACCTCTTCGCGCTTTAGTTGTCTTTATGATAGTAAAAATGGCTGCCTTCAGGTAAGGGCGAAGCAAAGAAGAAATTAA ATGTTTCTTTGCAGAAGGGACAGCTTCATCACCCACAGAGCCTTTTGCAATGCATTAACAGAAGAAAGCAACAAACTAAAGCAAGGAATTCTCAACAACAACAACAATAACAATAACATAGAACCAATCTCAATTATCTCCACTCCAAAGCTTCCTCATTTTGGCACATCAATCATGCCTGAATTCAACCCTTACGATCAAAAAAACCCTTTCAAAACCCTTCCCCAAGAACTCAACAACTCGACCCCCACCACCACCACAGGTGCACCCGGAGGGTTGTTTATGGTCGGACCCAGAAGCAACAACAATTCTTCCTCTTTCTCAAGCCTTAAGCTCAGCTCCACCACCTCTTCGCGCTTTAGTTGTCTTTATGATAGTAAAAATGGCTGCCTTCAGGTAAGGGCGAAGCAAAGAAGAAATTAA
BLAST of CSPI07G17180 vs. TrEMBL
Match: A0A0A0K5A7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G395230 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 1.6e-72 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of CSPI07G17180 vs. TrEMBL
Match: A0A061DSA6_THECC (Indeterminate(ID)-domain 2 OS=Theobroma cacao GN=TCM_004569 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 9.3e-17 Identity = 62/134 (46.27%), Postives = 87/134 (64.93%), Query Frame = 1
BLAST of CSPI07G17180 vs. TrEMBL
Match: A0A067HHA2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010444mg PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-16 Identity = 69/145 (47.59%), Postives = 87/145 (60.00%), Query Frame = 1
BLAST of CSPI07G17180 vs. TrEMBL
Match: V4VW00_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023420mg PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.6e-16 Identity = 68/143 (47.55%), Postives = 87/143 (60.84%), Query Frame = 1
BLAST of CSPI07G17180 vs. TrEMBL
Match: B9S3T6_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0555270 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.5e-16 Identity = 64/135 (47.41%), Postives = 84/135 (62.22%), Query Frame = 1
BLAST of CSPI07G17180 vs. TAIR10
Match: AT3G13810.2 (AT3G13810.2 indeterminate(ID)-domain 11) HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06 Identity = 26/59 (44.07%), Postives = 33/59 (55.93%), Query Frame = 1
BLAST of CSPI07G17180 vs. NCBI nr
Match: gi|700189672|gb|KGN44905.1| (hypothetical protein Csa_7G395230 [Cucumis sativus]) HSP 1 Score: 280.0 bits (715), Expect = 2.2e-72 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of CSPI07G17180 vs. NCBI nr
Match: gi|449436797|ref|XP_004136179.1| (PREDICTED: protein indeterminate-domain 2-like [Cucumis sativus]) HSP 1 Score: 256.1 bits (653), Expect = 3.5e-65 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1
BLAST of CSPI07G17180 vs. NCBI nr
Match: gi|659101550|ref|XP_008451665.1| (PREDICTED: zinc finger protein NUTCRACKER-like [Cucumis melo]) HSP 1 Score: 225.7 bits (574), Expect = 5.0e-56 Identity = 118/129 (91.47%), Postives = 122/129 (94.57%), Query Frame = 1
BLAST of CSPI07G17180 vs. NCBI nr
Match: gi|764642500|ref|XP_011470993.1| (PREDICTED: protein indeterminate-domain 2-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 95.5 bits (236), Expect = 7.8e-17 Identity = 71/146 (48.63%), Postives = 84/146 (57.53%), Query Frame = 1
BLAST of CSPI07G17180 vs. NCBI nr
Match: gi|590718511|ref|XP_007050834.1| (Indeterminate(ID)-domain 2 [Theobroma cacao]) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-16 Identity = 62/134 (46.27%), Postives = 87/134 (64.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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