CSPI06G00220 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTACTTTACTACATTAAAATATCGTTTGCCTCGGTTTTTCGAAACAAATGTGTGACTTAATCTAAGGTCTCACTGTATTTTCATAATCATATTGTAAACAGAGGAATTTTAGACTCTTTAGCTTTAGTTCTAAAAGAAAAATTGGAAGATTCAAATTCCTATACTCAAATTGGTAAATTAAAGAAAGATGGAGTGAGAGAGGGAGAAAGGCATTTTCTTTGAAAGCAATAAAATTTGGATTATACGACATCGTACGTAAAATCCCCCCAAGATAACACAAAAAAGTTAGTATAGAAGTTGCGAGCGAGGAAATTAGGGTTTCGAATTTCGACAATCGGTTCTGCTAATTGGAAATTGGAATTGGGAAGACGAGATGTGTAGAGGTTGAGGATAAGGTGTGGTGGAGCTGCTTGAGATTCATCAGGATTCAAGGATCATGTTGGTTTGAATTTTAGAATTTTGGGGTTTAGGGTTTTGTTTTGTCTGTGAAGGTGAAGGTAAAGGTAAAGGCGAAGGCGAGAAGAAACGATGAAGAAGCTAAGATGGGCAATGGACGGGCAAGGCTTCTGGGATCTCGATGTTTCAACGTCTAGAACACTCGATGGCTCTGCTTCCCCGGTTCCTTCTCCTTTACACTTACTTCCTTTGGGATTATCCAGAGGCGTTCGTCTTTCCAGAGCCAAGCAGATCGATTTTATGCAGCGTTTCATGGCTGCTCCTTTTGTTCCTTCTTATTCCCCCTCCCATGGCTTCTCTCTTCAACGCGTCTTCTCCGTACCCTTTTCAGATTCTGGGTAACTCAATCCTCTCTTTTTTGTTATTGGGTTCTTCTCATTCTTATGCTGGCATTTACATTTGTATTGATTCTCCATTAAATCTGCCTTAAAAGCACTGCAGCTCCATTACTCTCTTAGGCCAGTTCAATTTGCAGAAATTCATGTCCTCTCTGATGAAAACTGGTTCTGGAGAGATGTGTCAGTCGTATTCCTCACTTCTGCAATATATTGGAAGGCATCTTTACCAACGGTCTTTGTATGCTGTTGGTATCTCTGCCGATATCTTGTTACCACCCGATGATTCGCTGATGATTAGCTTCGATGGATATGGTGACAGTGATATAGTTCGAACAAAAGCAGTATTTCACCGCAAGGCATGTATATTTCTGGCACTTAGTAGAATTGTAAATTATGTATGCTGGTTGTTCTTGTTCTTGTTTTGATGTAGATTGTTTGTTTACGTCGATGCAGTTCCTACATCATGATCTAACAGTGGAGGCACTTTCTCCAGGACTTTTTATGGAGAAATGTGGTAGATATTGGGATGTGCCTTCTTCATTGGTTGTTGATCTAGGTTCTGTTGCTTCCGATTCGGGTTTGAGTTACCATTTGTCTATGCACCAGAATGCTGGGTTTCCCTCACAATTGGGAAGTGAACCGACCCATTCTGCTCCTTTCTGTTTACTTCCTGGTCTATCAGCCAAGGCTGCGTTTGCCTTTAAGAAGAACTTTGAAATTTGGAGAAGTAATGCCAAGAAGTTAAAGATGGTGCAACCTTATGACATTTTTCTATCAACTCCTCATGTTTCATTGTCAGCGATCATTGGTATGAATCCACACTGATTGTCCTTCAATGAAACTTCTGATGCTATGTTTAGCCCCCTAAAGCTATTGCCATTTTTCAATTCTGTCTCTAAAAATCTCACTAGCCCTCCAAGATTAAGGATTCCAACCTTAACTTAACCTCTTTGATTCTTTTGTTTGTTTGTTTTAATCTTACCTCAGAAGTTTAGGTGTTGATGTTCATAGAAAATAATGTAAATGTTATGAGATCATACATTTTTGGTCAGTTTCAGTCACGTTAATGGGTAACAGCCTTACTTGAACTCTATCAGTTCTTTAGGTTGTAGAATTGTGTCCTTGAGTTTTAAAGATCACATTAATGAGTAGGAACTTCTTGAAGTTTTTTGACGTAGTGAGGCTATATGGATGATGGTACGCATAAAATGGGGGAAGGTTTAAGGACCATATTATAATTGTGACCTTATTTTTATTCGCATTTGCAGTTGCAATTGCTATCTTTGGCCATCAAATGCAGGATTTGACAAACTCAGAAATGATAATAGACACAGTTCATCCTTAACCCTTCTGTGTTCAAAATTCTCTTTTGCTTTACGTATAAAATTTTCGAACTATTGTTTTGCATCAGGAAAAGAAGAAATTTAGTTTAACTCTTTAAGATGTTTTAGTTATTATATAGTTTTGCAGATGGTATGAAGCTGCAAGCCGTTCATTTGCAAATTATACTTTACAATTTCCACTAATTTTGGCATCTCTATTGATCTTAAAAGGTGCTGTAGCTACTTCCTACTTTGGAGACGATTTGGCTAGATCAGCAGCACAAGACAGTCTTGAGAAATTCAAAGGATTTTACATGAAGAGTTCTAGAATAAGATCGACTGTTTTCGCGGATTTATTCACTTCTATTTCTTTTTCAGCTCAGTATGGGACGTTTCAGAAAAAATATCTGGATCTTACCCGATTTTCTGCTTGTATGGATTTCCATTCTGGCTCCAAGTTTCTTTCAGGATCCATGCTTTTGATAGATGATCTTTCCAACTCCCGGCACCCAAAAACTGAATCTGTGAAAGCGACCTTGCCTAATGCAAGATTTTCCATTCAGCAACAGGTATGTCCGTCTTCCATTCAGCTGCTGAATGTGGACTAAATCAATAATGATAAACTGTAAAGAAAAACCAGTATTTGTATCCCAATCCTGTTCTTTTTTAATCTAGAAAGTTCCGGTTTATATTAGTTTTGAAAAATTCTTATTGGTTGTCTAGGGCACTAAGTGAGTTATGAAGTCTGGAGTTAATGTATTGAAATTTGAAAGTCTATATTTGAGGTGCAAAGTTGTAGGATGAAATTCATCGACAAATTTGCAAATTTCAATAGTAAAAACATCATTGAAATTGAGTTGTTTAACACCACTCATGAAGTTGGCTCATGAGTTAGTTGGGTGGGCTACTTCTAATAAGGAGGGGTGTGTGACTTGAAGGTTTTGACTTTTGTCTTTCTTAGCTTGGTTTGGTTATTGACCATGATGCCTATTTTTGTATCTGTGAGGGGACGATTCTGCTTAATGAAGATTTATGATATCTTTTTTCCAAAAAAAAAAAATCTTAAGAAGTTGGTGGGCCTAGTAGACCTCTTAGTGAAAGTGTCTCACGAGTTTGAACACTTGTAGAAATTTCCATGGTTTCAGATAAGATTGAAAGGAAAATGATAATGTATATCATGTTTGGAATTGATTGGCAACAACTCATTTGAAAACCTTCGCAAATCAGGAATTATGATATGAGTTTTGTGATGGATTTCTTGAAACATTGGTTGCAGATTGCTGGACCTGTGAGCTTTAGAGCAGATACAGGAGTTGCAATAGATTTGAATAAAGCAGGGTGGGATTTATTACGAGTGGAAGAGCCTACATTTGCCTTGGAATATGCGTTGCATGTTCTTGGTTCAGCTAAGGCAATTGCTTGGTATTCACCAAAGCATAGAGAATTTATGGTAGAGCTTCGTTTCTACGAGACCTGATGTCGTTATGGTGACCAATGTTGCTACGCCCATTCTTTTGTTTCTTTATTTGACAACAAACACATTCAGCTTTGAGTTGTCTTAACACCCTCTCTTTTATTCGTTCAATAGCATTGGGTGAACTCATCAGGTGATGGATTAGATTTTTAACCTTTTTTATTGAGAACATATATATATAGTAAGAAAATGAGTTATCCTCAAGTTGATGGTTGAAAAACCTTTTGATTTGATGTTATGAAAACATTGTATACAATGATTTAGCAATAGCAAGCTGTTAAATTTTGACAAGGC ATGTCCTCTCTGATGAAAACTGGTTCTGGAGAGATGTGTCAGTCGTATTCCTCACTTCTGCAATATATTGGAAGGCATCTTTACCAACGGTCTTTGTATGCTGTTGGTATCTCTGCCGATATCTTGTTACCACCCGATGATTCGCTGATGATTAGCTTCGATGGATATGGTGACAGTGATATAGTTCGAACAAAAGCAGTATTTCACCGCAAGTTCCTACATCATGATCTAACAGTGGAGGCACTTTCTCCAGGACTTTTTATGGAGAAATGTGGTAGATATTGGGATGTGCCTTCTTCATTGGTTGTTGATCTAGGTTCTGTTGCTTCCGATTCGGGTTTGAGTTACCATTTGTCTATGCACCAGAATGCTGGGTTTCCCTCACAATTGGGAAGTGAACCGACCCATTCTGCTCCTTTCTGTTTACTTCCTGGTCTATCAGCCAAGGCTGCGTTTGCCTTTAAGAAGAACTTTGAAATTTGGAGAAGTAATGCCAAGAAGTTAAAGATGGTGCAACCTTATGACATTTTTCTATCAACTCCTCATGTTTCATTGTCAGCGATCATTGGTGCTGTAGCTACTTCCTACTTTGGAGACGATTTGGCTAGATCAGCAGCACAAGACAGTCTTGAGAAATTCAAAGGATTTTACATGAAGAGTTCTAGAATAAGATCGACTGTTTTCGCGGATTTATTCACTTCTATTTCTTTTTCAGCTCAGTATGGGACGTTTCAGAAAAAATATCTGGATCTTACCCGATTTTCTGCTTGTATGGATTTCCATTCTGGCTCCAAGTTTCTTTCAGGATCCATGCTTTTGATAGATGATCTTTCCAACTCCCGGCACCCAAAAACTGAATCTGTGAAAGCGACCTTGCCTAATGCAAGATTTTCCATTCAGCAACAGATTGCTGGACCTGTGAGCTTTAGAGCAGATACAGGAGTTGCAATAGATTTGAATAAAGCAGGGTGGGATTTATTACGAGTGGAAGAGCCTACATTTGCCTTGGAATATGCGTTGCATGTTCTTGGTTCAGCTAAGGCAATTGCTTGGTATTCACCAAAGCATAGAGAATTTATGGTAGAGCTTCGTTTCTACGAGACCTGA ATGTCCTCTCTGATGAAAACTGGTTCTGGAGAGATGTGTCAGTCGTATTCCTCACTTCTGCAATATATTGGAAGGCATCTTTACCAACGGTCTTTGTATGCTGTTGGTATCTCTGCCGATATCTTGTTACCACCCGATGATTCGCTGATGATTAGCTTCGATGGATATGGTGACAGTGATATAGTTCGAACAAAAGCAGTATTTCACCGCAAGTTCCTACATCATGATCTAACAGTGGAGGCACTTTCTCCAGGACTTTTTATGGAGAAATGTGGTAGATATTGGGATGTGCCTTCTTCATTGGTTGTTGATCTAGGTTCTGTTGCTTCCGATTCGGGTTTGAGTTACCATTTGTCTATGCACCAGAATGCTGGGTTTCCCTCACAATTGGGAAGTGAACCGACCCATTCTGCTCCTTTCTGTTTACTTCCTGGTCTATCAGCCAAGGCTGCGTTTGCCTTTAAGAAGAACTTTGAAATTTGGAGAAGTAATGCCAAGAAGTTAAAGATGGTGCAACCTTATGACATTTTTCTATCAACTCCTCATGTTTCATTGTCAGCGATCATTGGTGCTGTAGCTACTTCCTACTTTGGAGACGATTTGGCTAGATCAGCAGCACAAGACAGTCTTGAGAAATTCAAAGGATTTTACATGAAGAGTTCTAGAATAAGATCGACTGTTTTCGCGGATTTATTCACTTCTATTTCTTTTTCAGCTCAGTATGGGACGTTTCAGAAAAAATATCTGGATCTTACCCGATTTTCTGCTTGTATGGATTTCCATTCTGGCTCCAAGTTTCTTTCAGGATCCATGCTTTTGATAGATGATCTTTCCAACTCCCGGCACCCAAAAACTGAATCTGTGAAAGCGACCTTGCCTAATGCAAGATTTTCCATTCAGCAACAGATTGCTGGACCTGTGAGCTTTAGAGCAGATACAGGAGTTGCAATAGATTTGAATAAAGCAGGGTGGGATTTATTACGAGTGGAAGAGCCTACATTTGCCTTGGAATATGCGTTGCATGTTCTTGGTTCAGCTAAGGCAATTGCTTGGTATTCACCAAAGCATAGAGAATTTATGGTAGAGCTTCGTTTCTACGAGACCTGA
BLAST of CSPI06G00220 vs. Swiss-Prot
Match: TGD4_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Arabidopsis thaliana GN=TGD4 PE=1 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 1.2e-88 Identity = 168/354 (47.46%), Postives = 236/354 (66.67%), Query Frame = 1
BLAST of CSPI06G00220 vs. TrEMBL
Match: A0A0A0K824_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G001740 PE=4 SV=1) HSP 1 Score: 734.2 bits (1894), Expect = 7.9e-209 Identity = 367/368 (99.73%), Postives = 367/368 (99.73%), Query Frame = 1
BLAST of CSPI06G00220 vs. TrEMBL
Match: A5BHS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020812 PE=4 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 2.4e-112 Identity = 202/354 (57.06%), Postives = 255/354 (72.03%), Query Frame = 1
BLAST of CSPI06G00220 vs. TrEMBL
Match: D7T697_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g00870 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 3.1e-112 Identity = 202/353 (57.22%), Postives = 255/353 (72.24%), Query Frame = 1
BLAST of CSPI06G00220 vs. TrEMBL
Match: M5XPM9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008014mg PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 1.7e-110 Identity = 200/350 (57.14%), Postives = 254/350 (72.57%), Query Frame = 1
BLAST of CSPI06G00220 vs. TrEMBL
Match: A0A067K6W8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19095 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 1.4e-109 Identity = 200/361 (55.40%), Postives = 256/361 (70.91%), Query Frame = 1
BLAST of CSPI06G00220 vs. TAIR10
Match: AT3G06960.1 (AT3G06960.1 pigment defective 320) HSP 1 Score: 328.2 bits (840), Expect = 6.6e-90 Identity = 168/354 (47.46%), Postives = 236/354 (66.67%), Query Frame = 1
BLAST of CSPI06G00220 vs. TAIR10
Match: AT2G44640.1 (AT2G44640.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 196.1 bits (497), Expect = 3.9e-50 Identity = 120/355 (33.80%), Postives = 182/355 (51.27%), Query Frame = 1
BLAST of CSPI06G00220 vs. NCBI nr
Match: gi|778709018|ref|XP_004138517.2| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucumis sativus]) HSP 1 Score: 734.2 bits (1894), Expect = 1.1e-208 Identity = 367/368 (99.73%), Postives = 367/368 (99.73%), Query Frame = 1
BLAST of CSPI06G00220 vs. NCBI nr
Match: gi|659116830|ref|XP_008458281.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucumis melo]) HSP 1 Score: 691.0 bits (1782), Expect = 1.1e-195 Identity = 344/368 (93.48%), Postives = 355/368 (96.47%), Query Frame = 1
BLAST of CSPI06G00220 vs. NCBI nr
Match: gi|645233790|ref|XP_008223512.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Prunus mume]) HSP 1 Score: 420.2 bits (1079), Expect = 3.6e-114 Identity = 211/369 (57.18%), Postives = 265/369 (71.82%), Query Frame = 1
BLAST of CSPI06G00220 vs. NCBI nr
Match: gi|147865781|emb|CAN81147.1| (hypothetical protein VITISV_020812 [Vitis vinifera]) HSP 1 Score: 413.7 bits (1062), Expect = 3.4e-112 Identity = 202/354 (57.06%), Postives = 255/354 (72.03%), Query Frame = 1
BLAST of CSPI06G00220 vs. NCBI nr
Match: gi|359477333|ref|XP_003631965.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Vitis vinifera]) HSP 1 Score: 413.3 bits (1061), Expect = 4.4e-112 Identity = 202/353 (57.22%), Postives = 255/353 (72.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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