CSPI05G14890 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G14890
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTransposon Ty3-I Gag-Pol polyprotein
LocationChr5 : 15622569 .. 15626029 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTACATTGGTCATCTTTAACCATGACTTTTTGGGCAAAAGGCAAGCAAATTGTGCTTAAGGGAGATCCATCTCTGATTAAGGCAGAGTGTTTCTTGACGACATTAGAGAAAACTTGGGATATAGAAGATCAAGGATTCCTCTTAGAATTCCAGAATTATGAGATGGAAGTAGAGGATAATTATGAAAAAGAAACAGAGGAAAAGAGAGATGAGGAAGAATTACCCATGACTCAATCCTTGCTCAAGTATTATGTTGAGATATTTGAGACACCAAAGAGCCTACCTCCAAAAAGGGCTATTGATCACCGTATACTAACTCTACTGAAACATAGACCTATCAACGTTAGACCTTACAAATATGGTCATGTGTAGAAGGAAGAAATCGAAAAGCTAGTAATCGAAATACTTCAGGTAGGGGTGATCAAACCTAGTCATAGGCCTACAACCCTTACTTTAGTCCGGTGTTGTTAGTAAAGAAGGATGGGGGATGGAGATTTTGTGTCGATTATCACAAGCTAAACCAAGTAACTGTGTCTGATAAGTTCCCAATCCCGGTGATTGAAGAGTTATTAGATGAATTGAATGGAGCAACAGTTTTTTTCCAAATTAGATTTGAAATCTGGTTATCACCAGATAAGAATGAAAGAGGAAAGATGTGGAGAAAATAGCGTTCCGCACACATGAGGGACACTACGAGTTCCTAGTTATGTCGTTCGCCCTCACAAATGCCCCCGCCACCTTCCAGTCATTGATGAATCAGGTATTTAAGTCTTTTCTTAGATGCTGTGTTTTGATCTTTTTTAATGACATCCTAGTTTATAGTGCGGATATAGACGAACATGCAAAGCATCTAGGCATGGTCTTTAACGTATTGAAGGATAACCAATTATTTGCTAACAAGAATAAGTGTGTGATAGCCCATTCTCAAATCCAATATTTGGGACATATGATATCCAAGAGGGGAGTAGAGGCCGATGAGGATAAAATTAGGAGTATGATAAATTGACCACCACTAAAAGACGTCTCTAGGTTAAGGGGTTTCTTGGGACTGACGGGCTATTATAGGAGGTTTGTTAAGGGCTATGAGGAGATAGCTGCACCACTGACCAAGTTATTACAAAAAAATGCCTTCAAATGGAGTGAGGAATCAACAACTGCCTTCGAAAATCTTAAGCTAGCAATGAATACCTTACTGATTTTGGCTTTACCAAATTGGAACATACCTTTCACTATTGAAACTGATGCGTCTGGTGTGAGATTAGAAGCTGTGATTTCTCAAAATGGCCATCCAATTGCTTTATTCAGCAAAATATTATCTACAAGAGCCCAAAACAAATTTATTTATGCAAGGGAATTGATGACTGTAGTTCTTTCCGTACAAAAGTGGAGACATCACTTGCTTGGGAGAAAGTTCACCATAATTTCGGATCAAACTCTCAAATTCTTATTAGAACAAAGAGAGGTGCAGCCCCAATTCCTGGAATGTTTGACAAAGCTCCTTGGCTATGATTTTGAGATACTATACCAGCCAGAACTTCAAAACAAGATTGGTGATGCTCTATCAAGAATGGAACAACCTTTCGAACTGAACAGTATGACAACTACCGAAATTATTGATGTGGAACTGATCTGAAGGAAGTTGGTATGGATGAAGAACTTAAAACAATTATAGAGGAATTGAAGAAGAACTTTTCGGAAGGAGGTAAGTTTCAGGTGGTGAATGGGAGGCTACTTTATAAAGGAAGACTGGTAGGATTTAAAACCTCTTCTCTTATACCAAAGATACTACATACTTTTAATGATTCTATTCTTGGGGGTCACTCCGAATTTTTAGGAACTTATAAAAGGATCAGTGGAGAACTATACTGGAAGCATATGAAGGCTGGTGTAAAGAAATATGTCGAACAATGCGATATCTGCCAACAAAACAAATATGAAGCGACCAAGCCTGCTGGGCTACTTCAATCAATTCCCATTTCGGATAGAATATTAGAAGATTGGACAATGGACTTTATTAAGGGGTTACCCCCGGTCGGAGGAGTTGATGTGATCATGGTTGTAGTTGACCGATTCAGTAAGTATTCTTACTTGATACTGCTGAGACATCCATTTTCGGCTAAGCAAGTTGCTTCCATCCATTGACAGGGTAATAAGAAAGCATGACATTCCCAAGTCAATTATCACAGACAGGGATAAAAGCTTTCTTAGTTACTTCTGGAAAGAACTATTCGCGACTATGGGGACGATTCTAAAAAGGAGTACGACGTTTCATCCACAAACAGATTGACAGACGGAGAGGGTGAACAGATGCCTTGAAACTTACTTAAGGTGCTTTTGTAATGAACAGGCTAGAAAATGGGATAAATTGATTCCTTGGGCAGAATTGTGGTACAATACCACCTTCCATGCGTACACCAAGATCACCCCCTTCCAGATTGTATATGGCAGTTCCCCTCCTCCCCTGTTATCCTATGGTCATAAGAAGATTCCTAACAATGGGGTAGAAACAATGGGGTAGAAACAAGCTGAAAGAAAGGGACCTAGTCATCAATGCTTTGAAGGAAAACCTGTGTGCAGCACAGAACATAATGAAAAAAATGGCTGATTGGAAACGAAGGGAGCTGAAGTTTCAAGTAGGACATGAAGTCTACTTAAAATTGAGACCCTATCGACAACGTTCATTAGCTTGGAAGAAGTGTGAAAAGTTGGCTCCAAAATATTACGAACCTTACAAAATTATTGAAGAAATTGGTGAAGTTGCTTATAAGCTGATGTTACCCCCTGAAGCCATTTCTCAGTTAAAACTAAAGCCGGGAAAACAACAAGCCGCCAACATCAGCAACCTATCCTAACGAAAGAGTTTGAGCTGCAATTATGGCCCGAAACAGTGTTGGGAGTTCGCTGGAACCAGGAACTGGGAGGAAATGAATGGTTTATTAAATGGAAAGGGCTACCGGACAATGAAGCAACATGGGAATCGGTCTTTCAAACGAACCAACAATTCCATAATTTTCCCCTTGAGGACAAGTTGAACTTGGAGCCGAGGGGTATTGTAAGGCCCCCTATTGTCCATACATACAAAAGGAGGGGCAAAAACGTAAAAGCTCACGCAATAAAAGATCAGGGAATGTTAGGAAAAGAACATGAGAGTGGGGCCCGCGGGGAGGAATGAGAGGTGAGATATAAATAGGCCTTTATCGGGATTGGTAGCTAGGTTAATTTTTGTCATCATTTTGATAGGAGAGGGTGCTGCAGCCTGGGGAATGGACGAGCTTGACCTAAAGAGCTGGGTATATTTGTTATTATCGTTGCTTGTTATTTCCTTATTTCTACTGTTGTAATCCTTTGACATATATATAAATAAAGTGTATCAAGTGATGCCTCTGTAGTGTATTTTAGTATTATATCTGTAGAACCTCTACAGAGATACAGGTAATGAGGCAGTTGTTTGTTGA

mRNA sequence

ATGAAGGTACATTGGTCATCTTTAACCATGACTTTTTGGGCAAAAGGCAAGCAAATTGTGCTTAAGGGAGATCCATCTCTGATTAAGGCAGAGTGTTTCTTGACGACATTAGAGAAAACTTGGGATATAGAAGATCAAGGATTCCTCTTAGAATTCCAGAATTATGAGATGGAAGTAGAGGATAATTATGAAAAAGAAACAGAGGAAAAGAGAGATGAGGAAGAATTACCCATGACTCAATCCTTGCTCAAGTATTATGTTGAGATATTTGAGACACCAAAGAGCCTACCTCCAAAAAGGGCTATTGATCACCGTATACTAACTCTACTGAAACATAGACCTATCAACGTTAGACCTTACAAATATGGTCATGTTCCGGTGTTGTTAGTAAAGAAGGATGGGGGATGGAGATTTTGTGTCGATTATCACAAGCTAAACCAAGTAACTGTGTCTGATAAGTTCCCAATCCCGGTGATTGAAGAGTTATTAGATGAATTGAATGGAGCAACAGGACACTACGAGTTCCTAGTTATGTCGTTCGCCCTCACAAATGCCCCCGCCACCTTCCAGTCATTGATGAATCAGGATAACCAATTATTTGCTAACAAGAATAAGTGTGTGATAGCCCATTCTCAAATCCAATATTTGGGACATATGATATCCAAGAGGGGAGTAGAGGCCGATGAGGATAAAATTAGGAACGTCTCTAGGTTAAGGGGTTTCTTGGGACTGACGGGCTATTATAGGAGGTTTGTTAAGGGCTATGAGGAGATAGCTGCACCACTGACCAAGTTATTACAAAAAAATGCCTTCAAATGGAGTGAGGAATCAACAACTGCCTTCGAAAATCTTAAGCTAGCAATGAATACCTTACTGATTTTGGCTTTACCAAATTGGAACATACCTTTCACTATTGAAACTGATGCGTCTGGTGTGAGATTAGAAGCTGTGATTTCTCAAAATGGCCATCCAATTGCTTTATTCAGCAAAATATTATCTACAAGAGCCCAAAACAAATTTATTTATGCAAGGGAATTGATGACTGTAGTTCTTTCCGTACAAAAGTGGAGACATCACTTGCTTGGGAGAAAGTTCACCATAATTTCGGATCAAACTCTCAAATTCTTATTAGAACAAAGAGAGGTGCAGCCCCAATTCCTGGAATGTTTGACAAAGCTCCTTGGCTATGATTTTGAGATACTATACCAGCCAGAACTTCAAAACAAGATTGGTGATGCTCTATCAAGAATGGAACAACCTTTCGAACTGAACAAGGAATTGAAGAAGAACTTTTCGGAAGGAGGTAAGTTTCAGGTGGTGAATGGGAGGCTACTTTATAAAGGAAGACTGGTAGGATTTAAAACCTCTTCTCTTATACCAAAGATACTACATACTTTTAATGATTCTATTCTTGGGGGTCACTCCGAATTTTTAGGAACTTATAAAAGGATCAGTGGAGAACTATACTGGAAGCATATGAAGGCTGGTGTAAAGAAATATGTCGAACAATGCGATATCTGCCAACAAAACAAATATGAAGCGACCAAGCCTGCTGGGCTACTTCAATCAATTCCCATTTCGGATAGAATATTAGAAGATTGGACAATGGACTTTATTAAGGGGTTACCCCCGGTCGGAGGAGTTGATGTGATCATGGTTGTAGTTGACCGATTCAGTAAGTATTCTTACTTGATACTGCTGAGACATCCATTTTCGGCTAAGCAAGCTAGAAAATGGGATAAATTGATTCCTTGGGCAGAATTGTGGTACAATACCACCTTCCATGCGTACACCAAGATCACCCCCTTCCAGATTGTATATGGCAGTTCCCCTCCTCCCCTGTTATCCTATGGTCATAAGAAGATTCCTAACAATGGGAACATAATGAAAAAAATGGCTGATTGGAAACGAAGGGAGCTGAAGTTTCAAGTAGGACATGAAGTCTACTTAAAATTGAGACCCTATCGACAACGTTCATTAGCTTGGAAGAAGTGTGAAAACCATTTCTCAGTTAAAACTAAAGCCGGGAAAACAACAAGCCGCCAACATCAGCAACCTATCCTAACGAAAGAGTTTGAGCTGCAATTATGGCCCGAAACAGTGTTGGGAGTTCGCTGGAACCAGGAACTGGGAGGAAATGAATGGTTTATTAAATGGAAAGGGCTACCGGACAATGAAGCAACATGGGAATCGGTCTTTCAAACGAACCAACAATTCCATAATTTTCCCCTTGAGGACAAGTTGAACTTGGAGCCGAGGGGAGAGGGTGCTGCAGCCTGGGGAATGGACGAGCTTGACCTAAAGAGCTGGAACCTCTACAGAGATACAGGTAATGAGGCAGTTGTTTGTTGA

Coding sequence (CDS)

ATGAAGGTACATTGGTCATCTTTAACCATGACTTTTTGGGCAAAAGGCAAGCAAATTGTGCTTAAGGGAGATCCATCTCTGATTAAGGCAGAGTGTTTCTTGACGACATTAGAGAAAACTTGGGATATAGAAGATCAAGGATTCCTCTTAGAATTCCAGAATTATGAGATGGAAGTAGAGGATAATTATGAAAAAGAAACAGAGGAAAAGAGAGATGAGGAAGAATTACCCATGACTCAATCCTTGCTCAAGTATTATGTTGAGATATTTGAGACACCAAAGAGCCTACCTCCAAAAAGGGCTATTGATCACCGTATACTAACTCTACTGAAACATAGACCTATCAACGTTAGACCTTACAAATATGGTCATGTTCCGGTGTTGTTAGTAAAGAAGGATGGGGGATGGAGATTTTGTGTCGATTATCACAAGCTAAACCAAGTAACTGTGTCTGATAAGTTCCCAATCCCGGTGATTGAAGAGTTATTAGATGAATTGAATGGAGCAACAGGACACTACGAGTTCCTAGTTATGTCGTTCGCCCTCACAAATGCCCCCGCCACCTTCCAGTCATTGATGAATCAGGATAACCAATTATTTGCTAACAAGAATAAGTGTGTGATAGCCCATTCTCAAATCCAATATTTGGGACATATGATATCCAAGAGGGGAGTAGAGGCCGATGAGGATAAAATTAGGAACGTCTCTAGGTTAAGGGGTTTCTTGGGACTGACGGGCTATTATAGGAGGTTTGTTAAGGGCTATGAGGAGATAGCTGCACCACTGACCAAGTTATTACAAAAAAATGCCTTCAAATGGAGTGAGGAATCAACAACTGCCTTCGAAAATCTTAAGCTAGCAATGAATACCTTACTGATTTTGGCTTTACCAAATTGGAACATACCTTTCACTATTGAAACTGATGCGTCTGGTGTGAGATTAGAAGCTGTGATTTCTCAAAATGGCCATCCAATTGCTTTATTCAGCAAAATATTATCTACAAGAGCCCAAAACAAATTTATTTATGCAAGGGAATTGATGACTGTAGTTCTTTCCGTACAAAAGTGGAGACATCACTTGCTTGGGAGAAAGTTCACCATAATTTCGGATCAAACTCTCAAATTCTTATTAGAACAAAGAGAGGTGCAGCCCCAATTCCTGGAATGTTTGACAAAGCTCCTTGGCTATGATTTTGAGATACTATACCAGCCAGAACTTCAAAACAAGATTGGTGATGCTCTATCAAGAATGGAACAACCTTTCGAACTGAACAAGGAATTGAAGAAGAACTTTTCGGAAGGAGGTAAGTTTCAGGTGGTGAATGGGAGGCTACTTTATAAAGGAAGACTGGTAGGATTTAAAACCTCTTCTCTTATACCAAAGATACTACATACTTTTAATGATTCTATTCTTGGGGGTCACTCCGAATTTTTAGGAACTTATAAAAGGATCAGTGGAGAACTATACTGGAAGCATATGAAGGCTGGTGTAAAGAAATATGTCGAACAATGCGATATCTGCCAACAAAACAAATATGAAGCGACCAAGCCTGCTGGGCTACTTCAATCAATTCCCATTTCGGATAGAATATTAGAAGATTGGACAATGGACTTTATTAAGGGGTTACCCCCGGTCGGAGGAGTTGATGTGATCATGGTTGTAGTTGACCGATTCAGTAAGTATTCTTACTTGATACTGCTGAGACATCCATTTTCGGCTAAGCAAGCTAGAAAATGGGATAAATTGATTCCTTGGGCAGAATTGTGGTACAATACCACCTTCCATGCGTACACCAAGATCACCCCCTTCCAGATTGTATATGGCAGTTCCCCTCCTCCCCTGTTATCCTATGGTCATAAGAAGATTCCTAACAATGGGAACATAATGAAAAAAATGGCTGATTGGAAACGAAGGGAGCTGAAGTTTCAAGTAGGACATGAAGTCTACTTAAAATTGAGACCCTATCGACAACGTTCATTAGCTTGGAAGAAGTGTGAAAACCATTTCTCAGTTAAAACTAAAGCCGGGAAAACAACAAGCCGCCAACATCAGCAACCTATCCTAACGAAAGAGTTTGAGCTGCAATTATGGCCCGAAACAGTGTTGGGAGTTCGCTGGAACCAGGAACTGGGAGGAAATGAATGGTTTATTAAATGGAAAGGGCTACCGGACAATGAAGCAACATGGGAATCGGTCTTTCAAACGAACCAACAATTCCATAATTTTCCCCTTGAGGACAAGTTGAACTTGGAGCCGAGGGGAGAGGGTGCTGCAGCCTGGGGAATGGACGAGCTTGACCTAAAGAGCTGGAACCTCTACAGAGATACAGGTAATGAGGCAGTTGTTTGTTGA
Homology
[Close]
BLAST of CSPI05G14890 vs. Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 3.0e-41
Identity = 115/364 (31.59%), Postives = 178/364 (48.90%), Query Frame = 1 

Query: 136 WRFCVDYHKLNQVTVSDKFPIPVIEELLDELNGA-------------------------- 195
           +R  +DY KLN++T+ D++PIP ++E+L +L                             
Sbjct: 261 YRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTA 320

Query: 196 ----TGHYEFLVMSFALTNAPATFQSLMNQDNQLFANKN--------------------- 255
               +GHYE+L M F L NAPATFQ  MN   +   NK+                     
Sbjct: 321 FSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNS 380

Query: 256 ------KCVIAHSQIQ------------YLGHMISKRGVEADEDKIRNV---------SR 315
                 K   A+ ++Q            +LGH+++  G++ +  K++ +           
Sbjct: 381 IQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKE 440

Query: 316 LRGFLGLTGYYRRFVKGYEEIAAPLTKLLQKNAFKWSE--ESTTAFENLKLAMNTLLILA 375
           +R FLGLTGYYR+F+  Y +IA P+T  L+K     ++  E   AFE LK  +    IL 
Sbjct: 441 IRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQ 500

Query: 376 LPNWNIPFTIETDASGVRLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSVQK 419
           LP++   F + TDAS + L AV+SQNGHPI+  S+ L+    N     +EL+ +V + + 
Sbjct: 501 LPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKT 560

[Close]
BLAST of CSPI05G14890 vs. Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.5e-32
Identity = 80/227 (35.24%), Postives = 132/227 (58.15%), Query Frame = 1 

Query: 204 NKCVIAHSQIQYLGHMISKRGVEADEDKIRNVSR---------LRGFLGLTGYYRRFVKG 263
           +KC     +  +LGH+++  G++ + +KI  + +         ++ FLGLTGYYR+F+  
Sbjct: 399 DKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPN 458

Query: 264 YEEIAAPLTKLLQKNAF--KWSEESTTAFENLKLAMNTLLILALPNWNIPFTIETDASGV 323
           + +IA P+TK L+KN      + E  +AF+ LK  ++   IL +P++   FT+ TDAS V
Sbjct: 459 FADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDV 518

Query: 324 RLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSVQKWRHHLLGRKFTIISD-Q 383
            L AV+SQ+GHP++  S+ L+    N     +EL+ +V + + +RH+LLGR F I SD Q
Sbjct: 519 ALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQ 578

Query: 384 TLKFLLEQREVQPQFLECLTKLLGYDFEILYQPELQNKIGDALSRME 419
            L +L   ++   +      KL  +DF+I Y    +N + DALSR++
Sbjct: 579 PLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSRIK 625

[Close]
BLAST of CSPI05G14890 vs. Swiss-Prot
Match: M860_ARATH (Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana GN=AtMg00860 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-24
Identity = 60/120 (50.00%), Postives = 79/120 (65.83%), Query Frame = 1 

Query: 195 QDNQLFANKNKCVIAHSQIQYLGH--MISKRGVEADEDKI---------RNVSRLRGFLG 254
           + +Q +AN+ KC     QI YLGH  +IS  GV AD  K+         +N + LRGFLG
Sbjct: 12  EQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLG 71

Query: 255 LTGYYRRFVKGYEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMNTLLILALPNWNIPF 304
           LTGYYRRFVK Y +I  PLT+LL+KN+ KW+E +  AF+ LK A+ TL +LALP+  +PF
Sbjct: 72  LTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVLALPDLKLPF 131

[Close]
BLAST of CSPI05G14890 vs. Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-23
Identity = 113/478 (23.64%), Postives = 203/478 (42.47%), Query Frame = 1 

Query: 31  ECFLTTLEKTWDIEDQGFLLEFQNYEMEVEDNYEKETEEKRDEEELPMTQSLLKYYVEIF 90
           E F + LE         F LE +   + V + Y+++   K DE            Y + +
Sbjct: 273 ELFKSQLENICSEYIDIFALESE--PITVNNLYKQQLRLKDDEP----------VYTKNY 332

Query: 91  ETPKSLPPKRAIDHRILTLLKHRPINVRPYKYGHVPVLLVKKDGG-------WRFCVDYH 150
            +P S   +  I  ++  L+K + +     +Y   P+LLV K          WR  +DY 
Sbjct: 333 RSPHSQVEE--IQAQVQKLIKDKIVEPSVSQYNS-PLLLVPKKSSPNSDKKKWRLVIDYR 392

Query: 151 KLNQVTVSDKFPIPVIEELLDELNGA---------TGHYEFL-------VMSFALTN--- 210
           ++N+  ++DKFP+P I+++LD+L  A         +G ++         + SF+ +N   
Sbjct: 393 QINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSY 452

Query: 211 -----------APATFQSLMN------QDNQLFANKNKCVIAHS---------------- 270
                      AP +FQ +M       + +Q F   +  ++                   
Sbjct: 453 RFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKC 512

Query: 271 -----------------QIQYLGHMISKRGVEADEDKI---------RNVSRLRGFLGLT 330
                            ++ +LGH  + +G+  D+ K           +    R F+   
Sbjct: 513 REYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFC 572

Query: 331 GYYRRFVKGYEEIAAPLTKLLQKNA-FKWSEESTTAFENLKLAMNTLLILALPNWNIPFT 390
            YYRRF+K + + +  +T+L +KN  F+W++E   AF +LK  +    +L  P+++  F 
Sbjct: 573 NYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFSKEFC 632

Query: 391 IETDASGVRLEAVISQ--NGH--PIALFSKILSTRAQNKFIYARELMTVVLSVQKWRHHL 418
           I TDAS     AV++Q  NGH  P+A  S+  +    NK    +EL  +  ++  +R ++
Sbjct: 633 ITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYI 692

[Close]
BLAST of CSPI05G14890 vs. Swiss-Prot
Match: POLY_DROME (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster GN=pol PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.8e-23
Identity = 72/245 (29.39%), Postives = 126/245 (51.43%), Query Frame = 1 

Query: 196 DNQLFANKNKCVIAHSQIQYLGHMISKRGVEADEDKIRNVS---------RLRGFLGLTG 255
           D  +  ++ K       ++YLG ++SK G ++D +K++ +          ++R FLGL  
Sbjct: 366 DANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLAS 425

Query: 256 YYRRFVKGYEEIAAPLTKLLQ------------KNAFKWSEESTTAFENLK-LAMNTLLI 315
           YYR F+K +  IA P+T +L+            K   +++E    AF+ L+ +  +  +I
Sbjct: 426 YYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDVI 485

Query: 316 LALPNWNIPFTIETDASGVRLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSV 375
           L  P++  PF + TDAS   + AV+SQ G PI + S+ L    QN     REL+ +V ++
Sbjct: 486 LKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERELLAIVWAL 545

Query: 376 QKWRHHLLG-RKFTIISD-QTLKFLLEQREVQPQFLECLTKLLGYDFEILYQPELQNKIG 417
            K ++ L G R+  I +D Q L F +  R    +     + +  ++ ++ Y+P  +N + 
Sbjct: 546 GKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVA 605

[Close]
BLAST of CSPI05G14890 vs. TrEMBL
Match: A0A087FZI0_ARAAL (Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs71112U000100 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.2e-134
Identity = 282/710 (39.72%), Postives = 396/710 (55.77%), Query Frame = 1 

Query: 1    MKVHWSSLTMTFWAKGKQIVLKGDPSLIKAECFLTTLEKTWDIEDQGFLLEFQNYEMEVE 60
            M  +W    ++F  +G+Q+ L+G+P +  +   L  L K  D E QG ++E+        
Sbjct: 337  MVCNWKLQKLSFKVEGRQVELQGNPGICCSPVTLKGLWKALDQEGQGVIIEYGG------ 396

Query: 61   DNYEKETEEKRDEEELPMT---QSLLKYYVEIFETPKSLPPKRAIDHRILTLLKHRPINV 120
                   +  + EEE+P+T   QS+L+ +  +F  P+ LPP R  +H I       P++V
Sbjct: 397  ------VQGPKPEEEVPVTEGIQSVLREFQSVFNEPQGLPPTRGREHAIELTPGAAPVSV 456

Query: 121  RPYKYGHV---------------------------PVLLV-KKDGGWRFCVDYHKLNQVT 180
            RP++Y  +                           PVLLV KK+G WRFCVDY  LN+VT
Sbjct: 457  RPFRYPQIQREELEKLVATMLAAGIIQESTSPFSSPVLLVKKKNGSWRFCVDYRALNKVT 516

Query: 181  VSDKFPIPVIEELLDELNGAT------------------------------GHYEFLVMS 240
            V D +PIP+I++LLDEL+GA                               GHYEFLVM 
Sbjct: 517  VGDSYPIPMIDQLLDELHGAVIFSKLDLRAGYHQIRVRAEDVPKTAFRTHDGHYEFLVMP 576

Query: 241  FALTNAPATFQSLMNQ--------------DN-------------------------QLF 300
            F LTNAP+TFQSLMN               D+                         QLF
Sbjct: 577  FGLTNAPSTFQSLMNDLFRPYLRRFVLMLFDDILVYSKSEAEHQGHLRTVLQVLTDNQLF 636

Query: 301  ANKNKCVIAHSQIQYLGHMISKRGVEADEDKI---------RNVSRLRGFLGLTGYYRRF 360
            AN  KC     ++ YLGH+IS  GV AD  K+         RNV  LRGFLGLTGYYR+F
Sbjct: 637  ANSKKCQFGSQKVDYLGHVISAEGVAADPAKVQAMVDWPVPRNVKALRGFLGLTGYYRKF 696

Query: 361  VKGYEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMNTLLILALPNWNIPFTIETDASG 420
            VKGY EIA PLT LL+K+ F+WS++   AF++LK+AM+T+ +LAL ++++PF IE+DASG
Sbjct: 697  VKGYGEIARPLTALLKKDQFQWSQKVEDAFQSLKVAMSTVPVLALVDFSLPFVIESDASG 756

Query: 421  VRLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSVQKWRHHLLGRKFTIISDQ 480
            V L AV+ Q   PIA FS+  + R + K +Y RELM +V ++QKW+H+LLGRKF + +DQ
Sbjct: 757  VGLGAVLMQQKQPIAYFSQAQTERQRLKSVYERELMAIVFAIQKWKHYLLGRKFLVRTDQ 816

Query: 481  -TLKFLLEQREVQPQFLECLTKLLGYDFEILYQPELQNKIGDALSRM------------- 540
             +LKFLLEQRE+  ++   LTK+LG+DFEI Y+P L+NK  DALSR+             
Sbjct: 817  KSLKFLLEQREINLEYQRWLTKILGFDFEIQYKPGLENKAADALSRIDAVPQLCALSMHV 876

Query: 541  --------------EQPFELNKELKKNFSEGGKFQVVNGRLLYKGRLVGFKTSSLIPKIL 574
                          E+  +L +E+  + +    + VV GRL  KGRLV    S L+  +L
Sbjct: 877  AIQLSEIDEAIEKDEELSKLKQEVVTDATSHPDYSVVQGRLFMKGRLVLPAASPLVKLVL 936

[Close]
BLAST of CSPI05G14890 vs. TrEMBL
Match: A0A087H8D5_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G106900 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.6e-126
Identity = 284/712 (39.89%), Postives = 386/712 (54.21%), Query Frame = 1 

Query: 1    MKVHWSSLTMTFWAKGKQIVLKGDPSLIKAECFLTTLEKTWDIEDQGFLLEFQNYEM--- 60
            M+V+W    + F  + ++++L+GDP L      L    K    E +G ++E  N +    
Sbjct: 463  MRVNWKLQRIRFHNEDREVLLQGDPGLCCTPVSLKAFWKVVSTEGEGMIVELNNCQQAGA 522

Query: 61   EVEDNYEKETEEKRDEEELPMTQSLLKYYVEIFETPKSLPPKRAIDHRILTLLKHRPINV 120
            E + N  K+ +E            +L  + ++FE P+ LPP R  +H I      RP+ V
Sbjct: 523  EQQHNIPKDLQE------------VLVVFDQVFEEPQGLPPSRGREHSITLEPGSRPVTV 582

Query: 121  RPYKYGHV---------------------------PVLLV-KKDGGWRFCVDYHKLNQVT 180
            RP++Y  V                           PVLLV KKDG WRFCVDY  LN+ T
Sbjct: 583  RPFRYPQVQKAEIEKQVAVMLAAGIIRESTSPYSSPVLLVRKKDGSWRFCVDYRALNKAT 642

Query: 181  VSDKFPIPVIEELLDELNGA------------------------------TGHYEFLVMS 240
            V D +PIP+I++LLDEL+GA                               GHYEFLVM 
Sbjct: 643  VGDSYPIPMIDQLLDELHGACVFSKLDLRSGYHQIRVRAEDVPKTAFRTHDGHYEFLVMP 702

Query: 241  FALTNAPATFQSLMNQ--------------DNQLFANKN--------KCVIAHSQ----- 300
            F LTNAPATFQ+LMN               D+ L  +K+        + V+   Q     
Sbjct: 703  FGLTNAPATFQALMNDVFRQHLRKFVLVFFDDILVYSKSASEHRNHLQLVLQLLQDHQLY 762

Query: 301  ------------IQYLGHMISKRGVEADEDKI---------RNVSRLRGFLGLTGYYRRF 360
                        I+YLGH+I+  GV AD  KI         RNV  LRGFLGLTGYYR+F
Sbjct: 763  ANKRKCQFGSRSIEYLGHVITAEGVSADASKIQAMVDWPEPRNVKALRGFLGLTGYYRKF 822

Query: 361  VKGYEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMNTLLILALPNWNIPFTIETDASG 420
            V+GY  IA PLT LLQK+ F+WS E++TAF NLK AM T+ +L + +++  F +E+DASG
Sbjct: 823  VRGYGSIAKPLTSLLQKDQFRWSPEASTAFNNLKQAMVTVPVLTMADFDAQFVVESDASG 882

Query: 421  VRLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSVQKWRHHLLGRKFTIISDQ 480
              L AV+ Q+  P+A FS+ L+ R + K +Y RELM +V ++QKWRH+LLGRKF + +DQ
Sbjct: 883  TGLGAVLMQHQKPLAYFSQALTDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQ 942

Query: 481  -TLKFLLEQREVQPQFLECLTKLLGYDFEILYQPELQNKIGDALSRME---QPF------ 540
             +LKFLLEQR++  ++ + LTK+LG+DF I Y+  L+NK  DALSR +   Q F      
Sbjct: 943  KSLKFLLEQRQINMEYQKWLTKILGFDFNIQYKSGLENKAADALSRRDAIPQLFALSIPA 1002

Query: 541  ---------ELNKELK---------KNFSEGGKFQVVNGRLLYKGRLVGFKTSSLIPKIL 576
                     E++K+LK          +      F VV GRLL +G+LV    S L+  IL
Sbjct: 1003 AIQLEDISSEVDKDLKLQKIKAEVLADPKSHAGFTVVQGRLLRQGKLVVPAQSHLVELIL 1062

[Close]
BLAST of CSPI05G14890 vs. TrEMBL
Match: A0A087GW89_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G106200 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.5e-116
Identity = 267/705 (37.87%), Postives = 363/705 (51.49%), Query Frame = 1 

Query: 195  QDNQLFANKNKCVIAHSQIQYLGHMISKRGVEADEDKI---------RNVSRLRGFLGLT 254
            +++QL+ N+ KC      ++YLGH+IS  GV AD +KI         RNV  LRG LGLT
Sbjct: 815  EEHQLYENRKKCYFGCESVEYLGHLISAEGVSADPEKINAMEKWPVPRNVKALRGILGLT 874

Query: 255  GYYRRFVKGYEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMNTLLILALPNWNIPFTI 314
            GYY++FV+ Y EIA PLT LL+ N F W  E+  AF  LK AM T+ +LA+ ++   F +
Sbjct: 875  GYYKKFVQRYGEIARPLTALLKNNKFSWGPEADEAFLKLKRAMVTVPVLAMADFTALFVV 934

Query: 315  ETDASGVRLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSVQKWRHHLLGRKF 374
            E+DASGV L AV+ QN  P+A F   L+ R   K IY RELM +V ++QKWRH+LLGR+F
Sbjct: 935  ESDASGVGLGAVLMQNQRPVACFRHALTERQMLKSIYERELMAIVFAIQKWRHYLLGRRF 994

Query: 375  TIISDQ-TLKFLLEQREVQPQFLECLTKLLGYDFEILYQPELQNKIGDALSRME------ 434
             + +DQ +LKFLLEQRE+  ++   LTK+LG+DFEI Y+P L+NK  DALSR E      
Sbjct: 995  VVRTDQKSLKFLLEQREINVEYQRWLTKILGFDFEIHYKPRLENKAADALSRREAMPQLF 1054

Query: 435  ---------------------QPFELNKELKKNFSEGGKFQVVNGRLLYKGRLVGFKTSS 494
                                 Q  +L +E+ ++ S    + VV GRLL +G+LV  +TS 
Sbjct: 1055 ALSVPAAIQLEDICSEVDKDPQLKKLKEEVLRDPSTHPDYAVVQGRLLRQGKLVLPRTSQ 1114

Query: 495  LIPKILHTFNDSILGGHSEFLGTYKRISGELYWKHMKAGVKKYVEQCDICQQNKYEATKP 554
            L+  IL  F+D  +GGH   L T +RI    YW+ M   +++YV +C +C +NKY    P
Sbjct: 1115 LVWVILREFHDGKVGGHGGVLKTQRRIGDLFYWQGMMTEIREYVAECVVCHKNKYSTLVP 1174

Query: 555  AGLLQSIPISDRILEDWTMDFIKGLPPVGGVDVIMVVVDRFSKYSYLILLRHPFSAKQAR 614
            AGLLQ +P+ ++I ED ++DFI+GLP   G DVIMVVVDR +K ++   L+HPF A +  
Sbjct: 1175 AGLLQPLPVPEQIWEDISLDFIEGLPKSEGYDVIMVVVDRLTKSAHFNRLKHPFVASEVA 1234

Query: 615  K----------------------------W----------------DKLIPWAE------ 674
                                         W                DK   W++      
Sbjct: 1235 LLFIQEVVRLHGFPKTLVSDRDKVFTGMFWGELFRGLETYLRCFASDKPKSWSQYLAWAE 1294

Query: 675  LWYNTTFHAYTKITPFQIVYGSSPPPLLSYGHKKIPNN---------------------- 734
            L YNT++H+  ++TPF+ V+G  PP L+ + +    N                       
Sbjct: 1295 LCYNTSYHSTIQMTPFKAVFGRDPPALVKFENGSTTNAKLETYLRDRDVVIILLRQHILK 1354

Query: 735  -GNIMKKMADWKRRELKFQVGHEVYLKLRPYRQRSLAWKKCEN----------------- 755
               +MK+ AD  RREL FQVG  VYLKL+PYRQ+SLA +  E                  
Sbjct: 1355 AQQVMKRQADKHRRELDFQVGDMVYLKLKPYRQKSLARRSNEKLSARYYGPYEVLARVGE 1414

[Close]
BLAST of CSPI05G14890 vs. TrEMBL
Match: A0A087HBU4_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G264600 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 262/702 (37.32%), Postives = 364/702 (51.85%), Query Frame = 1 

Query: 196  DNQLFANKNKCVIAHSQIQYLGHMISKRGVEADEDKIR---------NVSRLRGFLGLTG 255
            DNQ+FANKNKC    ++++YLGH+I+++GV AD  KI+          +  LRGFLGLTG
Sbjct: 684  DNQMFANKNKCQFGSAEVEYLGHVITQQGVAADPSKIKAMTDWPVPKTIKALRGFLGLTG 743

Query: 256  YYRRFVKGYEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMNTLLILALPNWNIPFTIE 315
            YYR+FV+GY  I  PLT LL+K+ F WSEE+  AFE LK AM+T+ +LAL +++  F +E
Sbjct: 744  YYRKFVRGYGNIVKPLTSLLKKDKFGWSEEAEQAFEALKPAMSTVPVLALADFSELFVVE 803

Query: 316  TDASGVRLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSVQKWRHHLLGRKFT 375
            +DASG+ L AV+ Q   PIALFS+ L+   + K +Y RELM +V ++QKWRH+LLG KF 
Sbjct: 804  SDASGIGLGAVLMQQQKPIALFSQALTDIQKLKSVYERELMAIVFAIQKWRHYLLGCKFL 863

Query: 376  IISDQ-TLKFLLEQREVQPQFLECLTKLLGYDFEILYQPELQNKIGDALSRME------- 435
            +I+DQ +LKFLLEQREV  ++ + LTK+LG+DF+I Y+P L+NK  DALSR+E       
Sbjct: 864  VITDQKSLKFLLEQREVNLEYQKWLTKILGFDFDIHYKPRLENKAADALSRVEAVPHLFA 923

Query: 436  -------QPFELNKELKKNFSEG-------------GKFQVVNGRLLYKGRLVGFKTSSL 495
                   Q  E+++E+++N   G              +F VVNGRLL  GRLV  K S +
Sbjct: 924  LSVPEALQLKEIDREVEQNPELGKLKLEVIADPTAHDEFTVVNGRLLRNGRLVLPKESPM 983

Query: 496  IPKILHTFNDSILGGHSEFLGTYKRISGELYWKHMKAGVKKYVEQCDICQQNKYEATKPA 555
            +  IL  F+D  +GGH     T KRI    +W+ M   +K+YV  C +CQ++KY    PA
Sbjct: 984  VKLILQEFHDGKVGGHGGIHKTQKRIGDMFFWRGMMTDIKEYVAACQVCQRHKYSTLAPA 1043

Query: 556  GLLQSIPISDRILEDWTMDFIKGLPPVGGVDVIMVVVDRFSKYSYLILLRHPFSAKQ--- 615
            GLLQ +PI   + ED +MDFIKGLP   G  VIMVVV+R +KYS+ I L+HP+ A     
Sbjct: 1044 GLLQPLPIPADVWEDTSMDFIKGLPKSEGFSVIMVVVERITKYSHFISLKHPYEASMVVQ 1103

Query: 616  -------------------------ARKWDKLI--------------------------- 675
                                      R W ++                            
Sbjct: 1104 IFIQEIVRLHGFPKTIVSDRDKTFTGRLWKEVFRLSGTKLNFNTAYHPQSDGQTEVTNMS 1163

Query: 676  --------------PWAEL--W----YNTTFHAYTKITPFQIVYGSSPPPLLSYGHKKIP 735
                           W +   W    YN++FH+ TK++PF++VYG     LL + +    
Sbjct: 1164 VETFLRCFCSEKPNKWVQFLAWAEMSYNSSFHSATKMSPFKVVYGREAHTLLKFENGSTD 1223

Query: 736  NNGNIMKKMADWKRRELKFQVGHEVYLKLRPYRQRSLAWKKCENHFSV------------ 751
            N        AD         +G  V+LKLRPY Q+SLA +  +  F+             
Sbjct: 1224 N--------AD-------LDLGDLVFLKLRPYIQQSLARRVNDKLFARFLGPFAVEARVG 1283

[Close]
BLAST of CSPI05G14890 vs. TrEMBL
Match: A0A087FX63_ARAAL (Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs67613U000200 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.4e-108
Identity = 242/652 (37.12%), Postives = 371/652 (56.90%), Query Frame = 1 

Query: 1   MKVHWSSLTMTFWAKGKQIVLKGDPSLIKAECFLTTLEKTWDIEDQGFLLEFQNYEMEVE 60
           MKV+W    M F  +G ++ L+GDP+L  +E  L    K  + ++ G ++E+   +    
Sbjct: 10  MKVNWGLQWMRFRVQGTEVTLQGDPTLCCSEFSLKAWLKAVEHDELGVIVEYNGLQ---- 69

Query: 61  DNYEKETEEKRDEEEL--PMTQSLLKYYVEIFETPKSLPP------------KRAIDHRI 120
                 +    D+  +  P+ Q +L+ +  +F  P+   P            K  I+ ++
Sbjct: 70  ------SVSPHDQSSVISPLLQQVLEKHPTVFSDPEGSKPVSVCPFRYPHAQKAEIERQV 129

Query: 121 LTLLKHRPINVRPYKYGHVPVLLVKKDGGWRFCVDYHKLNQVTVSDKFPIPVIEELLDEL 180
            ++L    I      +    +L+ KKDG WRFCVDY  LN+VT+   FPIP+I++LLDEL
Sbjct: 130 SSMLATGIIEESGSPFSRPVLLVKKKDGSWRFCVDYRALNKVTIPHSFPIPMIDQLLDEL 189

Query: 181 NGAT---------GHYEFLVMSFALTNAP--------------ATFQSLMN--QDNQLFA 240
           +GAT         G+++ LV +  + N                +  +++++  QD++L+A
Sbjct: 190 HGATVFSKLDLKSGYHQILVKATDVPNTAFMTHDGHKDLQDHQSHLETVLSVLQDHKLYA 249

Query: 241 NKNKCVIAHSQIQYLGHMISKRGVEADEDKI---------RNVSRLRGFLGLTGYYRRFV 300
           N+ KC    S+I+YLGH+IS  GV AD  KI         +N+  LRGFLGLTGYYR+FV
Sbjct: 250 NQKKCQFGCSEIEYLGHIISGEGVAADPQKIQAMVSWPEPKNIKALRGFLGLTGYYRKFV 309

Query: 301 KGYEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMNTLLILALPNWNIPFTIETDASGV 360
           +GY +IA PLT LL+K+ F+WSE ++ AF+ LK AM T+ +LAL +++  F +E+DASG+
Sbjct: 310 RGYGDIAKPLTSLLKKDQFQWSEAASVAFQQLKHAMITVPVLALADFSQLFVVESDASGI 369

Query: 361 RLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSVQKWRHHLLGRKFTIISDQ- 420
            L AV+ QN  PIA +S+ L+ R + K +Y RELM +V ++Q+WRH+LLG KF + +DQ 
Sbjct: 370 GLGAVLMQNQRPIAYYSQALTDRKKLKSVYERELMAIVFAIQRWRHYLLGMKFLVKTDQK 429

Query: 421 TLKFLLEQREVQPQFLECLTKLLGYDFEILYQPELQNKIGDALSRME---QPFELN---- 480
           +LKFLLEQ EV  ++ + LTK+LG++F+I+Y+P L+NK+ DALSR E   Q F L+    
Sbjct: 430 SLKFLLEQHEVNAEYQQWLTKILGFNFDIMYKPGLENKVADALSRKELLPQLFALSIPAA 489

Query: 481 ---KELKKNFSEGGKFQVVNGRLLY-----------KGRLVGFKTSSL-IPKILHTFNDS 540
                +++        + +   +L            +GRL+  K   L IPK        
Sbjct: 490 IQLDMIQEAVERDADLKKIKEEVLLNVGLHPEFSVVQGRLL--KQGKLVIPKTSPLVGVL 549

Query: 541 ILGGHSEFLG-------TYKRISGELYWKHMKAGVKKYVEQCDICQQNKYEATKPAGLLQ 575
           +   HS  +G       T KR+    YW  M A +K++V  C +CQ +KY    PAGLLQ
Sbjct: 550 LQEFHSSKMGGHGGILKTQKRLGALFYWAGMMANIKEFVAACLVCQTHKYSTLTPAGLLQ 609

[Close]
BLAST of CSPI05G14890 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 8.4e-26
Identity = 60/120 (50.00%), Postives = 79/120 (65.83%), Query Frame = 1 

Query: 195 QDNQLFANKNKCVIAHSQIQYLGH--MISKRGVEADEDKI---------RNVSRLRGFLG 254
           + +Q +AN+ KC     QI YLGH  +IS  GV AD  K+         +N + LRGFLG
Sbjct: 12  EQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLG 71

Query: 255 LTGYYRRFVKGYEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMNTLLILALPNWNIPF 304
           LTGYYRRFVK Y +I  PLT+LL+KN+ KW+E +  AF+ LK A+ TL +LALP+  +PF
Sbjct: 72  LTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVLALPDLKLPF 131

[Close]
BLAST of CSPI05G14890 vs. NCBI nr
Match: gi|674229247|gb|KFK23032.1| (hypothetical protein AALP_AAs71112U000100, partial [Arabis alpina])

HSP 1 Score: 488.8 bits (1257), Expect = 1.8e-134
Identity = 282/710 (39.72%), Postives = 396/710 (55.77%), Query Frame = 1 

Query: 1    MKVHWSSLTMTFWAKGKQIVLKGDPSLIKAECFLTTLEKTWDIEDQGFLLEFQNYEMEVE 60
            M  +W    ++F  +G+Q+ L+G+P +  +   L  L K  D E QG ++E+        
Sbjct: 337  MVCNWKLQKLSFKVEGRQVELQGNPGICCSPVTLKGLWKALDQEGQGVIIEYGG------ 396

Query: 61   DNYEKETEEKRDEEELPMT---QSLLKYYVEIFETPKSLPPKRAIDHRILTLLKHRPINV 120
                   +  + EEE+P+T   QS+L+ +  +F  P+ LPP R  +H I       P++V
Sbjct: 397  ------VQGPKPEEEVPVTEGIQSVLREFQSVFNEPQGLPPTRGREHAIELTPGAAPVSV 456

Query: 121  RPYKYGHV---------------------------PVLLV-KKDGGWRFCVDYHKLNQVT 180
            RP++Y  +                           PVLLV KK+G WRFCVDY  LN+VT
Sbjct: 457  RPFRYPQIQREELEKLVATMLAAGIIQESTSPFSSPVLLVKKKNGSWRFCVDYRALNKVT 516

Query: 181  VSDKFPIPVIEELLDELNGAT------------------------------GHYEFLVMS 240
            V D +PIP+I++LLDEL+GA                               GHYEFLVM 
Sbjct: 517  VGDSYPIPMIDQLLDELHGAVIFSKLDLRAGYHQIRVRAEDVPKTAFRTHDGHYEFLVMP 576

Query: 241  FALTNAPATFQSLMNQ--------------DN-------------------------QLF 300
            F LTNAP+TFQSLMN               D+                         QLF
Sbjct: 577  FGLTNAPSTFQSLMNDLFRPYLRRFVLMLFDDILVYSKSEAEHQGHLRTVLQVLTDNQLF 636

Query: 301  ANKNKCVIAHSQIQYLGHMISKRGVEADEDKI---------RNVSRLRGFLGLTGYYRRF 360
            AN  KC     ++ YLGH+IS  GV AD  K+         RNV  LRGFLGLTGYYR+F
Sbjct: 637  ANSKKCQFGSQKVDYLGHVISAEGVAADPAKVQAMVDWPVPRNVKALRGFLGLTGYYRKF 696

Query: 361  VKGYEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMNTLLILALPNWNIPFTIETDASG 420
            VKGY EIA PLT LL+K+ F+WS++   AF++LK+AM+T+ +LAL ++++PF IE+DASG
Sbjct: 697  VKGYGEIARPLTALLKKDQFQWSQKVEDAFQSLKVAMSTVPVLALVDFSLPFVIESDASG 756

Query: 421  VRLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSVQKWRHHLLGRKFTIISDQ 480
            V L AV+ Q   PIA FS+  + R + K +Y RELM +V ++QKW+H+LLGRKF + +DQ
Sbjct: 757  VGLGAVLMQQKQPIAYFSQAQTERQRLKSVYERELMAIVFAIQKWKHYLLGRKFLVRTDQ 816

Query: 481  -TLKFLLEQREVQPQFLECLTKLLGYDFEILYQPELQNKIGDALSRM------------- 540
             +LKFLLEQRE+  ++   LTK+LG+DFEI Y+P L+NK  DALSR+             
Sbjct: 817  KSLKFLLEQREINLEYQRWLTKILGFDFEIQYKPGLENKAADALSRIDAVPQLCALSMHV 876

Query: 541  --------------EQPFELNKELKKNFSEGGKFQVVNGRLLYKGRLVGFKTSSLIPKIL 574
                          E+  +L +E+  + +    + VV GRL  KGRLV    S L+  +L
Sbjct: 877  AIQLSEIDEAIEKDEELSKLKQEVVTDATSHPDYSVVQGRLFMKGRLVLPAASPLVKLVL 936

[Close]
BLAST of CSPI05G14890 vs. NCBI nr
Match: gi|729375164|ref|XP_010548864.1| (PREDICTED: uncharacterized protein LOC104820194 [Tarenaya hassleriana])

HSP 1 Score: 483.8 bits (1244), Expect = 5.7e-133
Identity = 349/945 (36.93%), Postives = 469/945 (49.63%), Query Frame = 1 

Query: 1    MKVHWSSLTMTFWAKGKQIVLKGDPSLIKAECFLTTLEKTWDIEDQGFLLEFQNYEMEVE 60
            +++ +  L + F      I + GDP+L  +   L +L K+    DQ +L++    E    
Sbjct: 571  VQMDFQDLELKFNQGTSWITVTGDPTLHNSLVTLRSLIKSVCEGDQSYLVKLGTIE---- 630

Query: 61   DNYEKETEEKRDEEELPMTQSLLKYYVEIFETPKSLPPKRAIDHRILTLLKHRPINVRPY 120
               E    + +  E L   Q++L+ +  +FE P  LPP R  +H I       P++VRPY
Sbjct: 631  ---ELVGADSKLPERL---QAVLEEFGPVFEVPTELPPIRGREHPINLKEGTDPVSVRPY 690

Query: 121  KYGHV---------------------------PVLLVKK-DGGWRFCVDYHKLNQVTVSD 180
            +Y H                            PVLLVKK DG WRFC+DY  LN+VTV D
Sbjct: 691  RYPHAHKEEIEKLVKDMLKAGIVRPSQSPFSSPVLLVKKKDGSWRFCIDYIALNKVTVLD 750

Query: 181  KF--PI--PVIEEL--------LDELNGA------------------TGHYEFLVMSFA- 240
            KF  P+   +++EL        LD  +G                    GHYEFLVM FA 
Sbjct: 751  KFPIPMIDQLLDELHGERVFSKLDLRSGYHQIRMKTEDIHKTAFRTHDGHYEFLVMPFAC 810

Query: 241  -LTNAPATFQSLMN--QDNQLFANKNKCVIAHSQIQYLGHMISKRGVEADEDKIR----- 300
             L +     Q ++   Q  QL+ANK KC     QI YLGH+IS+ GV  D  K       
Sbjct: 811  SLKDHATLLQMVLAVLQKQQLYANKKKCEFGKQQIDYLGHIISQEGVSTDPAKTAAMQKW 870

Query: 301  ----NVSRLRGFLGLTGYYRRFVKGYEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMN 360
                NV  LRGFLGLTGYYRRFV+ Y  IA PL  LL+K+ F WSE++++AF  LK AM 
Sbjct: 871  PTPSNVKELRGFLGLTGYYRRFVQNYGTIARPLIDLLKKDGFNWSEDASSAFRKLKQAMT 930

Query: 361  TLLILALPNWNIPFTIETDASGVRLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTV 420
            +  IL L ++   F +ETDASG  + AV+ Q   PIA FS+ LS R + K +Y RELMTV
Sbjct: 931  SAPILGLLDFRDEFVVETDASGFGIGAVLMQKHRPIAFFSQALSERERLKPVYERELMTV 990

Query: 421  VLSVQKWRHHLLGRKFTIISDQ-TLKFLLEQREVQPQFLECLTKLLGYDFEILYQPELQN 480
            VLS+Q+WRH+LLGR F + +DQ  LKFLLEQREV  ++   LTKLLGYDF+I+Y+P ++N
Sbjct: 991  VLSIQRWRHYLLGRSFLVCTDQKALKFLLEQREVSMEYQRWLTKLLGYDFQIVYRPGMEN 1050

Query: 481  KIGDALSRME--------------------QPFELNKE-------------LKKNFSEGG 540
            K  D LSRM                     Q  E+ KE             LK   ++ G
Sbjct: 1051 KAADGLSRMPHNAILEPTCMGLAITIPRNIQLVEIEKEIRQDKDLKEITDKLKDGETKVG 1110

Query: 541  KFQVVNGRLLYKGRLVGFKTSSLIPKILHTFNDSILGGHSEFLGTYKRISGELYWKHMKA 600
            K+ ++ G L YK RLV  + SS IP IL  F+DS +GGHS  L T KRI    +W  MK 
Sbjct: 1111 KYHLLQGMLRYKNRLVVSRHSSFIPTILAEFHDSKMGGHSGVLRTLKRIHEIFHWLGMKT 1170

Query: 601  GVKKYVEQCDICQQNKYEATKPAGLLQSIPISDRILEDWTMDFIKGLPPVGGVDVIMVVV 660
             +KKYV +C +CQ  KY    PAGLLQ +PI ++I ED +MD I+GLP   G +V++VVV
Sbjct: 1171 DIKKYVAECAVCQSQKYSTLAPAGLLQPLPIPEQIWEDISMDLIEGLPRSAGYNVVLVVV 1230

Query: 661  DRFSKYSYLILLRHPFSAKQARK-------------------WDKLIP---WAEL----- 720
            DR SKY++ I L+H FSA    K                    DK+     W+EL     
Sbjct: 1231 DRLSKYAHFIALKHLFSAMVVVKAFVQEVVKLHGFPKSIVSDRDKIFLSNFWSELFRIAG 1290

Query: 721  ------------------------------------------------WYNTTFHAYTKI 749
                                                            WYNT+FH   + 
Sbjct: 1291 TKLKFSTSYHPQTDGQTEVLNRCLETYLRCYANAHPRKWIQFLSWAEFWYNTSFHTALQS 1350

[Close]
BLAST of CSPI05G14890 vs. NCBI nr
Match: gi|923614274|ref|XP_013745228.1| (PREDICTED: uncharacterized protein LOC106447810 [Brassica napus])

HSP 1 Score: 483.4 bits (1243), Expect = 7.4e-133
Identity = 293/707 (41.44%), Postives = 388/707 (54.88%), Query Frame = 1 

Query: 1    MKVHWSSLTMTFWAKGKQIVLKGDPSLIKAECFLTTLEKTWDIEDQGFLLEFQNYEMEVE 60
            MKV+W    + F     + VL+GDP L  +   L ++ KT     +  L+E+   ++E  
Sbjct: 540  MKVNWKLQILRFKIGDNKYVLQGDPGLCCSAASLKSIWKTVQQGGEAMLIEYNGLQLE-- 599

Query: 61   DNYEKETEEKRDEEELPMTQSLLKYYVEIFETPKSLPPKRAIDHRILTLLKHRPINVRPY 120
                   EEK         Q++LK Y E+F  P+ LPP R  +H I+      P++VRP+
Sbjct: 600  -------EEKGGGSIPQPLQNILKEYEEVFAEPQGLPPSRGKEHAIVLKTDASPVSVRPF 659

Query: 121  KYGHV---------------------------PVLLVKK-DGGWRFCVDYHKLNQVTVSD 180
            +Y                              PVLLVKK DG WRFCVDY  LN+VT++D
Sbjct: 660  RYPQAQREEIEKQVALMLSAGIIRDSSSPFSSPVLLVKKKDGSWRFCVDYRALNKVTIAD 719

Query: 181  KFPIPVIEELLDELNGA------------------------------TGHYEFLVMSFAL 240
             +PIP+I++LLDEL GA                               GHYEFLVM F L
Sbjct: 720  SYPIPMIDQLLDELQGAKVFSKLDLKSGYHQILVKAEDVQKTAFRTHDGHYEFLVMPFGL 779

Query: 241  TNAPATFQSLMNQDNQLFANKNKCV-----IAHSQIQ----------------------- 300
            +NAPATFQSLMN+  + +  K   V     + +SQ Q                       
Sbjct: 780  SNAPATFQSLMNEIFRSYLRKFVLVFFDDILVYSQTQSEHEEHLRLVLEVLKEQGLYANR 839

Query: 301  -----------YLGHMISKRGVEADEDKIR---------NVSRLRGFLGLTGYYRRFVKG 360
                       YLGH+IS  GV ADE K+R          V  LRGFLGLTGYYR+FV+G
Sbjct: 840  KKCEFGSSRIEYLGHVISAEGVAADEGKVRAMLDWMEPKAVKELRGFLGLTGYYRKFVQG 899

Query: 361  YEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMNTLLILALPNWNIPFTIETDASGVRL 420
            Y +IA PLT LL+K+ FKWS E+  AF+ LK AM T+ +LALP++N  F IE+DASGV L
Sbjct: 900  YGDIARPLTSLLRKDQFKWSGEAALAFQKLKQAMATVPVLALPDFNEQFVIESDASGVGL 959

Query: 421  EAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSVQKWRHHLLGRKFTIISDQ-TL 480
             AV+ Q   PIA FS+ L+ R Q K +Y RELM +V ++QKWRH+LLGRKF + +DQ +L
Sbjct: 960  GAVLMQRQRPIAYFSQALTERQQMKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQKSL 1019

Query: 481  KFLLEQREVQPQFLECLTKLLGYDFEILYQPELQNKIGDALSR----------------- 540
            KFLLEQRE+  ++   LTK+LG+DF+I Y+P L+NK  DALSR                 
Sbjct: 1020 KFLLEQREINMEYQRWLTKILGFDFDIHYKPGLENKAADALSRKSPVTELFAVSVPVSIQ 1079

Query: 541  -------MEQPFELNK---ELKKNFSEGGKFQVVNGRLLYKGRLVGFKTSSLIPKILHTF 574
                   +E+  EL+K   EL ++ S    + +V GRLL  G+LV  KTS LI  IL  +
Sbjct: 1080 LEEVGSEVERDSELSKLIQELTQDPSSHPDYTLVQGRLLRHGKLVLPKTSKLIELILKEY 1139

[Close]
BLAST of CSPI05G14890 vs. NCBI nr
Match: gi|674245622|gb|KFK38387.1| (hypothetical protein AALP_AA3G106900 [Arabis alpina])

HSP 1 Score: 460.7 bits (1184), Expect = 5.2e-126
Identity = 284/712 (39.89%), Postives = 386/712 (54.21%), Query Frame = 1 

Query: 1    MKVHWSSLTMTFWAKGKQIVLKGDPSLIKAECFLTTLEKTWDIEDQGFLLEFQNYEM--- 60
            M+V+W    + F  + ++++L+GDP L      L    K    E +G ++E  N +    
Sbjct: 463  MRVNWKLQRIRFHNEDREVLLQGDPGLCCTPVSLKAFWKVVSTEGEGMIVELNNCQQAGA 522

Query: 61   EVEDNYEKETEEKRDEEELPMTQSLLKYYVEIFETPKSLPPKRAIDHRILTLLKHRPINV 120
            E + N  K+ +E            +L  + ++FE P+ LPP R  +H I      RP+ V
Sbjct: 523  EQQHNIPKDLQE------------VLVVFDQVFEEPQGLPPSRGREHSITLEPGSRPVTV 582

Query: 121  RPYKYGHV---------------------------PVLLV-KKDGGWRFCVDYHKLNQVT 180
            RP++Y  V                           PVLLV KKDG WRFCVDY  LN+ T
Sbjct: 583  RPFRYPQVQKAEIEKQVAVMLAAGIIRESTSPYSSPVLLVRKKDGSWRFCVDYRALNKAT 642

Query: 181  VSDKFPIPVIEELLDELNGA------------------------------TGHYEFLVMS 240
            V D +PIP+I++LLDEL+GA                               GHYEFLVM 
Sbjct: 643  VGDSYPIPMIDQLLDELHGACVFSKLDLRSGYHQIRVRAEDVPKTAFRTHDGHYEFLVMP 702

Query: 241  FALTNAPATFQSLMNQ--------------DNQLFANKN--------KCVIAHSQ----- 300
            F LTNAPATFQ+LMN               D+ L  +K+        + V+   Q     
Sbjct: 703  FGLTNAPATFQALMNDVFRQHLRKFVLVFFDDILVYSKSASEHRNHLQLVLQLLQDHQLY 762

Query: 301  ------------IQYLGHMISKRGVEADEDKI---------RNVSRLRGFLGLTGYYRRF 360
                        I+YLGH+I+  GV AD  KI         RNV  LRGFLGLTGYYR+F
Sbjct: 763  ANKRKCQFGSRSIEYLGHVITAEGVSADASKIQAMVDWPEPRNVKALRGFLGLTGYYRKF 822

Query: 361  VKGYEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMNTLLILALPNWNIPFTIETDASG 420
            V+GY  IA PLT LLQK+ F+WS E++TAF NLK AM T+ +L + +++  F +E+DASG
Sbjct: 823  VRGYGSIAKPLTSLLQKDQFRWSPEASTAFNNLKQAMVTVPVLTMADFDAQFVVESDASG 882

Query: 421  VRLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSVQKWRHHLLGRKFTIISDQ 480
              L AV+ Q+  P+A FS+ L+ R + K +Y RELM +V ++QKWRH+LLGRKF + +DQ
Sbjct: 883  TGLGAVLMQHQKPLAYFSQALTDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQ 942

Query: 481  -TLKFLLEQREVQPQFLECLTKLLGYDFEILYQPELQNKIGDALSRME---QPF------ 540
             +LKFLLEQR++  ++ + LTK+LG+DF I Y+  L+NK  DALSR +   Q F      
Sbjct: 943  KSLKFLLEQRQINMEYQKWLTKILGFDFNIQYKSGLENKAADALSRRDAIPQLFALSIPA 1002

Query: 541  ---------ELNKELK---------KNFSEGGKFQVVNGRLLYKGRLVGFKTSSLIPKIL 576
                     E++K+LK          +      F VV GRLL +G+LV    S L+  IL
Sbjct: 1003 AIQLEDISSEVDKDLKLQKIKAEVLADPKSHAGFTVVQGRLLRQGKLVVPAQSHLVELIL 1062

[Close]
BLAST of CSPI05G14890 vs. NCBI nr
Match: gi|674241376|gb|KFK34141.1| (hypothetical protein AALP_AA5G106200 [Arabis alpina])

HSP 1 Score: 428.7 bits (1101), Expect = 2.2e-116
Identity = 267/705 (37.87%), Postives = 363/705 (51.49%), Query Frame = 1 

Query: 195  QDNQLFANKNKCVIAHSQIQYLGHMISKRGVEADEDKI---------RNVSRLRGFLGLT 254
            +++QL+ N+ KC      ++YLGH+IS  GV AD +KI         RNV  LRG LGLT
Sbjct: 815  EEHQLYENRKKCYFGCESVEYLGHLISAEGVSADPEKINAMEKWPVPRNVKALRGILGLT 874

Query: 255  GYYRRFVKGYEEIAAPLTKLLQKNAFKWSEESTTAFENLKLAMNTLLILALPNWNIPFTI 314
            GYY++FV+ Y EIA PLT LL+ N F W  E+  AF  LK AM T+ +LA+ ++   F +
Sbjct: 875  GYYKKFVQRYGEIARPLTALLKNNKFSWGPEADEAFLKLKRAMVTVPVLAMADFTALFVV 934

Query: 315  ETDASGVRLEAVISQNGHPIALFSKILSTRAQNKFIYARELMTVVLSVQKWRHHLLGRKF 374
            E+DASGV L AV+ QN  P+A F   L+ R   K IY RELM +V ++QKWRH+LLGR+F
Sbjct: 935  ESDASGVGLGAVLMQNQRPVACFRHALTERQMLKSIYERELMAIVFAIQKWRHYLLGRRF 994

Query: 375  TIISDQ-TLKFLLEQREVQPQFLECLTKLLGYDFEILYQPELQNKIGDALSRME------ 434
             + +DQ +LKFLLEQRE+  ++   LTK+LG+DFEI Y+P L+NK  DALSR E      
Sbjct: 995  VVRTDQKSLKFLLEQREINVEYQRWLTKILGFDFEIHYKPRLENKAADALSRREAMPQLF 1054

Query: 435  ---------------------QPFELNKELKKNFSEGGKFQVVNGRLLYKGRLVGFKTSS 494
                                 Q  +L +E+ ++ S    + VV GRLL +G+LV  +TS 
Sbjct: 1055 ALSVPAAIQLEDICSEVDKDPQLKKLKEEVLRDPSTHPDYAVVQGRLLRQGKLVLPRTSQ 1114

Query: 495  LIPKILHTFNDSILGGHSEFLGTYKRISGELYWKHMKAGVKKYVEQCDICQQNKYEATKP 554
            L+  IL  F+D  +GGH   L T +RI    YW+ M   +++YV +C +C +NKY    P
Sbjct: 1115 LVWVILREFHDGKVGGHGGVLKTQRRIGDLFYWQGMMTEIREYVAECVVCHKNKYSTLVP 1174

Query: 555  AGLLQSIPISDRILEDWTMDFIKGLPPVGGVDVIMVVVDRFSKYSYLILLRHPFSAKQAR 614
            AGLLQ +P+ ++I ED ++DFI+GLP   G DVIMVVVDR +K ++   L+HPF A +  
Sbjct: 1175 AGLLQPLPVPEQIWEDISLDFIEGLPKSEGYDVIMVVVDRLTKSAHFNRLKHPFVASEVA 1234

Query: 615  K----------------------------W----------------DKLIPWAE------ 674
                                         W                DK   W++      
Sbjct: 1235 LLFIQEVVRLHGFPKTLVSDRDKVFTGMFWGELFRGLETYLRCFASDKPKSWSQYLAWAE 1294

Query: 675  LWYNTTFHAYTKITPFQIVYGSSPPPLLSYGHKKIPNN---------------------- 734
            L YNT++H+  ++TPF+ V+G  PP L+ + +    N                       
Sbjct: 1295 LCYNTSYHSTIQMTPFKAVFGRDPPALVKFENGSTTNAKLETYLRDRDVVIILLRQHILK 1354

Query: 735  -GNIMKKMADWKRRELKFQVGHEVYLKLRPYRQRSLAWKKCEN----------------- 755
               +MK+ AD  RREL FQVG  VYLKL+PYRQ+SLA +  E                  
Sbjct: 1355 AQQVMKRQADKHRRELDFQVGDMVYLKLKPYRQKSLARRSNEKLSARYYGPYEVLARVGE 1414

The following BLAST results are available for this feature:
BLAST of CSPI05G14890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
POL2_DROME3.0e-4131.59Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
POL3_DROME1.5e-3235.24Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
M860_ARATH1.5e-2450.00Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana GN=AtMg0... [more]
POL4_DROME1.7e-2323.64Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste... [more]
POLY_DROME2.8e-2329.39Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas... [more]
BLAST of CSPI05G14890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A087FZI0_ARAAL1.2e-13439.72Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs71112U000100 PE=4... [more]
A0A087H8D5_ARAAL3.6e-12639.89Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G106900 PE=4 SV=1[more]
A0A087GW89_ARAAL1.5e-11637.87Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G106200 PE=4 SV=1[more]
A0A087HBU4_ARAAL1.3e-11237.32Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G264600 PE=4 SV=1[more]
A0A087FX63_ARAAL3.4e-10837.12Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs67613U000200 PE=4... [more]
BLAST of CSPI05G14890 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG00860.18.4e-2650.00ATMG00860.1 DNA/RNA polymerases superfamily protein[more]
BLAST of CSPI05G14890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|674229247|gb|KFK23032.1|1.8e-13439.72hypothetical protein AALP_AAs71112U000100, partial [Arabis alpina][more]
gi|729375164|ref|XP_010548864.1|5.7e-13336.93PREDICTED: uncharacterized protein LOC104820194 [Tarenaya hassleriana][more]
gi|923614274|ref|XP_013745228.1|7.4e-13341.44PREDICTED: uncharacterized protein LOC106447810 [Brassica napus][more]
gi|674245622|gb|KFK38387.1|5.2e-12639.89hypothetical protein AALP_AA3G106900 [Arabis alpina][more]
gi|674241376|gb|KFK34141.1|2.2e-11637.87hypothetical protein AALP_AA5G106200 [Arabis alpina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR012337RNaseH-like_sf
IPR016197Chromo-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G14890.1CSPI05G14890.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainPROFILEPS50013CHROMO_2coord: 696..731
score: 10
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 528..584
score: 3.
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 525..604
score: 1.0
IPR016197Chromo domain-likeunknownSSF54160Chromo domain-likecoord: 685..737
score: 7.3
NoneNo IPR availableunknownCoilCoilcoord: 56..76
scor
NoneNo IPR availableGENE3DG3DSA:2.40.50.40coord: 699..731
score: 1.
NoneNo IPR availableGENE3DG3DSA:3.10.10.10coord: 101..193
score: 6.7
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 126..743
score: 6.9E
NoneNo IPR availablePANTHERPTHR24559:SF186SUBFAMILY NOT NAMEDcoord: 126..743
score: 6.9E
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 85..402
score: 2.22

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G14890Cucurbita maxima (Rimu)cmacpiB297
CSPI05G14890Cucurbita maxima (Rimu)cmacpiB759
CSPI05G14890Cucurbita moschata (Rifu)cmocpiB289
CSPI05G14890Cucurbita moschata (Rifu)cmocpiB749
CSPI05G14890Cucumber (Chinese Long) v2cpicuB239
CSPI05G14890Melon (DHL92) v3.5.1cpimeB343
CSPI05G14890Watermelon (Charleston Gray)cpiwcgB401
CSPI05G14890Watermelon (97103) v1cpiwmB391
CSPI05G14890Cucurbita pepo (Zucchini)cpecpiB188
CSPI05G14890Cucurbita pepo (Zucchini)cpecpiB441
CSPI05G14890Bottle gourd (USVL1VR-Ls)cpilsiB330
CSPI05G14890Melon (DHL92) v3.6.1cpimedB332
CSPI05G14890Cucumber (Gy14) v2cgybcpiB225
CSPI05G14890Silver-seed gourdcarcpiB0562
CSPI05G14890Silver-seed gourdcarcpiB0865
CSPI05G14890Cucumber (Chinese Long) v3cpicucB284
CSPI05G14890Watermelon (97103) v2cpiwmbB389
CSPI05G14890Wax gourdcpiwgoB455
CSPI05G14890Cucumber (Gy14) v1cgycpiB007