CSPI05G12510 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTTAGAGAAACAAAAAAGTGATGGGAGTCATTCAACATCTTGGCATGAGTGTAGTATTTGCAAGAAGAGCTTCAAAAGTGCAAAAGCTTTAGGAGGACATATGCGAGTGCATAACACTGGGGAGATAGACGCTAAGTTAAAGCAATCATCATCGGGACCAATCTCCACAGATTTGAGATGGGTAGTCCCGTCAGCTATTGCAGAAGGTAGTAGTCGAGATCGAAACCGAGGCAAGGGTAAGAAGGTACAAGAACTTCAACTTTTCAGCCAAAAACCCTCCAAGTTGAAGAAAAAGCAGTCCGATGAGAAGGCAGGAGGACAATCATCTCAACATGATAATGTTGACAATGAGTTGGATCTTGAACTTAGATTAGGATCTAACCCAAAGAAGTCAACTCCAACTATATTTAAGTTCTTCTGA ATGAATTTAGAGAAACAAAAAAGTGATGGGAGTCATTCAACATCTTGGCATGAGTGTAGTATTTGCAAGAAGAGCTTCAAAAGTGCAAAAGCTTTAGGAGGACATATGCGAGTGCATAACACTGGGGAGATAGACGCTAAGTTAAAGCAATCATCATCGGGACCAATCTCCACAGATTTGAGATGGGTAGTCCCGTCAGCTATTGCAGAAGGTAGTAGTCGAGATCGAAACCGAGGCAAGGGTAAGAAGGTACAAGAACTTCAACTTTTCAGCCAAAAACCCTCCAAGTTGAAGAAAAAGCAGTCCGATGAGAAGGCAGGAGGACAATCATCTCAACATGATAATGTTGACAATGAGTTGGATCTTGAACTTAGATTAGGATCTAACCCAAAGAAGTCAACTCCAACTATATTTAAGTTCTTCTGA ATGAATTTAGAGAAACAAAAAAGTGATGGGAGTCATTCAACATCTTGGCATGAGTGTAGTATTTGCAAGAAGAGCTTCAAAAGTGCAAAAGCTTTAGGAGGACATATGCGAGTGCATAACACTGGGGAGATAGACGCTAAGTTAAAGCAATCATCATCGGGACCAATCTCCACAGATTTGAGATGGGTAGTCCCGTCAGCTATTGCAGAAGGTAGTAGTCGAGATCGAAACCGAGGCAAGGGTAAGAAGGTACAAGAACTTCAACTTTTCAGCCAAAAACCCTCCAAGTTGAAGAAAAAGCAGTCCGATGAGAAGGCAGGAGGACAATCATCTCAACATGATAATGTTGACAATGAGTTGGATCTTGAACTTAGATTAGGATCTAACCCAAAGAAGTCAACTCCAACTATATTTAAGTTCTTCTGA
BLAST of CSPI05G12510 vs. TrEMBL
Match: A0A0A0KR10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G289630 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.1e-70 Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 1
BLAST of CSPI05G12510 vs. TrEMBL
Match: A0A0D2LXE8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G112700 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-07 Identity = 59/174 (33.91%), Postives = 85/174 (48.85%), Query Frame = 1
BLAST of CSPI05G12510 vs. TrEMBL
Match: A0A0A0LXG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G524710 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 7.5e-06 Identity = 56/169 (33.14%), Postives = 78/169 (46.15%), Query Frame = 1
BLAST of CSPI05G12510 vs. TrEMBL
Match: A0A0S3SD05_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G203200 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.7e-06 Identity = 48/156 (30.77%), Postives = 69/156 (44.23%), Query Frame = 1
BLAST of CSPI05G12510 vs. TrEMBL
Match: A0A0L9T7Z6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan238s005200 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.7e-06 Identity = 48/156 (30.77%), Postives = 69/156 (44.23%), Query Frame = 1
BLAST of CSPI05G12510 vs. NCBI nr
Match: gi|449445407|ref|XP_004140464.1| (PREDICTED: probable transcriptional regulator RABBIT EARS [Cucumis sativus]) HSP 1 Score: 273.9 bits (699), Expect = 1.6e-70 Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 1
BLAST of CSPI05G12510 vs. NCBI nr
Match: gi|659130551|ref|XP_008465230.1| (PREDICTED: transcriptional regulator TAC1-like [Cucumis melo]) HSP 1 Score: 162.5 bits (410), Expect = 5.3e-37 Identity = 98/150 (65.33%), Postives = 110/150 (73.33%), Query Frame = 1
BLAST of CSPI05G12510 vs. NCBI nr
Match: gi|823127365|ref|XP_012435280.1| (PREDICTED: transcriptional regulator TAC1-like [Gossypium raimondii]) HSP 1 Score: 63.9 bits (154), Expect = 2.5e-07 Identity = 59/174 (33.91%), Postives = 85/174 (48.85%), Query Frame = 1
BLAST of CSPI05G12510 vs. NCBI nr
Match: gi|950943037|ref|XP_014493724.1| (PREDICTED: transcriptional regulator TAC1-like [Vigna radiata var. radiata]) HSP 1 Score: 60.5 bits (145), Expect = 2.8e-06 Identity = 51/157 (32.48%), Postives = 73/157 (46.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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