CSPI04G18930 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTCTTCTTTCTTTTTTACCATTGTTTTATCTTTTGAGTCCATTTGTTATGTTGAAGGGGAGAACTATGTTGAAGGGGAGGAAGTGTCCAATCGTGCAACTGTTGAAAGCAAACAGAAAGAAGTGTTCAAGGTTTGCAACTTGGATGTGGATATTTCTGAGTAACTTTTACTTCTTGTTGTTTGCGACCCTTTTCTATTGTCACACTCAGGTAATTGTCACCGAGGTTTTGGATGGTGACAAGTTTTATGTTCAGACAATTCCGAACCAAACAGCCACTTCTCTACAGCAGCAACTAGAGACTTTGAATCTTCAAGAAGTCCCTTTAATTTGTGGTTTTAGTCCTAAAAAAGGTGATATCGTCCTAGCTCAATTTAGTTCAGACAAC ATGTGTTCTTCTTTCTTTTTTACCATTGTTTTATCTTTTGAGTCCATTTGTTATGTTGAAGGGGAGAACTATGTTGAAGGGGAGGAAGTGTCCAATCGTGCAACTGTTGAAAGCAAACAGAAAGAAGTGTTCAAGGTAATTGTCACCGAGGTTTTGGATGGTGACAAGTTTTATGTTCAGACAATTCCGAACCAAACAGCCACTTCTCTACAGCAGCAACTAGAGACTTTGAATCTTCAAGAAGTCCCTTTAATTTGTGGTTTTAGTCCTAAAAAAGGTGATATCGTCCTAGCTCAATTTAGTTCAGACAAC ATGTGTTCTTCTTTCTTTTTTACCATTGTTTTATCTTTTGAGTCCATTTGTTATGTTGAAGGGGAGAACTATGTTGAAGGGGAGGAAGTGTCCAATCGTGCAACTGTTGAAAGCAAACAGAAAGAAGTGTTCAAGGTAATTGTCACCGAGGTTTTGGATGGTGACAAGTTTTATGTTCAGACAATTCCGAACCAAACAGCCACTTCTCTACAGCAGCAACTAGAGACTTTGAATCTTCAAGAAGTCCCTTTAATTTGTGGTTTTAGTCCTAAAAAAGGTGATATCGTCCTAGCTCAATTTAGTTCAGACAAC
BLAST of CSPI04G18930 vs. TrEMBL
Match: E5GBL0_CUCME (Short-chain dehydrogenase/reductase OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 6.6e-28 Identity = 70/83 (84.34%), Postives = 72/83 (86.75%), Query Frame = 1
BLAST of CSPI04G18930 vs. TrEMBL
Match: A0A0A0LRJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000020 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.5e-27 Identity = 69/83 (83.13%), Postives = 72/83 (86.75%), Query Frame = 1
BLAST of CSPI04G18930 vs. TrEMBL
Match: D7TYP5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0283g00020 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.4e-24 Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
BLAST of CSPI04G18930 vs. TrEMBL
Match: A5BP89_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034601 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.4e-24 Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
BLAST of CSPI04G18930 vs. TrEMBL
Match: A0A067JF85_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26343 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 9.9e-24 Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = 1
BLAST of CSPI04G18930 vs. TAIR10
Match: AT5G61780.1 (AT5G61780.1 TUDOR-SN protein 2) HSP 1 Score: 102.4 bits (254), Expect = 1.7e-22 Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 1
BLAST of CSPI04G18930 vs. TAIR10
Match: AT5G07350.2 (AT5G07350.2 TUDOR-SN protein 1) HSP 1 Score: 100.1 bits (248), Expect = 8.3e-22 Identity = 51/85 (60.00%), Postives = 66/85 (77.65%), Query Frame = 1
BLAST of CSPI04G18930 vs. NCBI nr
Match: gi|659128761|ref|XP_008464356.1| (PREDICTED: staphylococcal nuclease domain-containing protein 1 [Cucumis melo]) HSP 1 Score: 131.3 bits (329), Expect = 9.5e-28 Identity = 70/83 (84.34%), Postives = 72/83 (86.75%), Query Frame = 1
BLAST of CSPI04G18930 vs. NCBI nr
Match: gi|449440482|ref|XP_004138013.1| (PREDICTED: staphylococcal nuclease domain-containing protein 1 [Cucumis sativus]) HSP 1 Score: 130.2 bits (326), Expect = 2.1e-27 Identity = 69/83 (83.13%), Postives = 72/83 (86.75%), Query Frame = 1
BLAST of CSPI04G18930 vs. NCBI nr
Match: gi|147855642|emb|CAN83456.1| (hypothetical protein VITISV_034601 [Vitis vinifera]) HSP 1 Score: 119.0 bits (297), Expect = 4.9e-24 Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
BLAST of CSPI04G18930 vs. NCBI nr
Match: gi|225447723|ref|XP_002273150.1| (PREDICTED: staphylococcal nuclease domain-containing protein 1 [Vitis vinifera]) HSP 1 Score: 119.0 bits (297), Expect = 4.9e-24 Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
BLAST of CSPI04G18930 vs. NCBI nr
Match: gi|802770122|ref|XP_012090546.1| (PREDICTED: staphylococcal nuclease domain-containing protein 1 [Jatropha curcas]) HSP 1 Score: 117.5 bits (293), Expect = 1.4e-23 Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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