CSPI04G17000 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAACCTATTGGCAAATGGTATTGTTGAAGGTCAATCTACTTCTAGACCTCCTTATTTTGATGGTTCAAATTATGCATATTGGAAAGCTAGAATGAAATTTTGTTTGCAATCTATTGACTATAATTTGTGGTTAATTGTTGCTAAAGGTCCTTATGTACCCATGAAAAATGTTGATAATGTTGATACGCCTAAATTAGAAGAAGAGTATGATGAAAATGAAATGAAAAAGTGTTCTTTTAATGCTAAGTTTATTAATTGTTTGTATTATGCCTTGAGTAAAGATGAATTTAATATAATATCCATGTGTTCTTCCACTCAAGAAATTTGGAATACTCTTGAAATTACTCATGAAGGAACAAATCAAGTTAAAGAGTCTAAAATTAGCATGTTTGTTCATAATTATGAATTGTTTAAGATGGATGCTAATGAGACTATCACCGATATGTTTACTAGATTTACTAACATCATAAATGCTTTGAAGGGTCTTGGTAAAGTTTATACAACTTCCGAAAATGTTAGAAAAATTATAAGGTCTCTACCTAAGACTTGGGAAGCTAAGGTAACGACAATCCAATTAGCAAAGGATCTCACCAAACTTCCACTAGAGGAGCTTATTGGCTCACTCATGACTCATGAGATCATTATGAAGAAGCACTCGGAGGATGAGTCCAAAAAGAAGAAGAGCATTATTGTATTAAAGACTATCTCCTTGGAAGTTGATCCCGGAGATGAAGATTGA ATGGCAAACCTATTGGCAAATGGTATTGTTGAAGGTCAATCTACTTCTAGACCTCCTTATTTTGATGGTTCAAATTATGCATATTGGAAAGCTAGAATGAAATTTTGTTTGCAATCTATTGACTATAATTTGTGGTTAATTGTTGCTAAAGGTCCTTATGTACCCATGAAAAATGTTGATAATGTTGATACGCCTAAATTAGAAGAAGAGTATGATGAAAATGAAATGAAAAAGTGTTCTTTTAATGCTAAGTTTATTAATTGTTTGTATTATGCCTTGAGTAAAGATGAATTTAATATAATATCCATGTGTTCTTCCACTCAAGAAATTTGGAATACTCTTGAAATTACTCATGAAGGAACAAATCAAGTTAAAGAGTCTAAAATTAGCATGTTTGTTCATAATTATGAATTGTTTAAGATGGATGCTAATGAGACTATCACCGATATGTTTACTAGATTTACTAACATCATAAATGCTTTGAAGGGTCTTGGTAAAGTTTATACAACTTCCGAAAATGTTAGAAAAATTATAAGGTCTCTACCTAAGACTTGGGAAGCTAAGGTAACGACAATCCAATTAGCAAAGGATCTCACCAAACTTCCACTAGAGGAGCTTATTGGCTCACTCATGACTCATGAGATCATTATGAAGAAGCACTCGGAGGATGAGTCCAAAAAGAAGAAGAGCATTATTGTATTAAAGACTATCTCCTTGGAAGTTGATCCCGGAGATGAAGATTGA ATGGCAAACCTATTGGCAAATGGTATTGTTGAAGGTCAATCTACTTCTAGACCTCCTTATTTTGATGGTTCAAATTATGCATATTGGAAAGCTAGAATGAAATTTTGTTTGCAATCTATTGACTATAATTTGTGGTTAATTGTTGCTAAAGGTCCTTATGTACCCATGAAAAATGTTGATAATGTTGATACGCCTAAATTAGAAGAAGAGTATGATGAAAATGAAATGAAAAAGTGTTCTTTTAATGCTAAGTTTATTAATTGTTTGTATTATGCCTTGAGTAAAGATGAATTTAATATAATATCCATGTGTTCTTCCACTCAAGAAATTTGGAATACTCTTGAAATTACTCATGAAGGAACAAATCAAGTTAAAGAGTCTAAAATTAGCATGTTTGTTCATAATTATGAATTGTTTAAGATGGATGCTAATGAGACTATCACCGATATGTTTACTAGATTTACTAACATCATAAATGCTTTGAAGGGTCTTGGTAAAGTTTATACAACTTCCGAAAATGTTAGAAAAATTATAAGGTCTCTACCTAAGACTTGGGAAGCTAAGGTAACGACAATCCAATTAGCAAAGGATCTCACCAAACTTCCACTAGAGGAGCTTATTGGCTCACTCATGACTCATGAGATCATTATGAAGAAGCACTCGGAGGATGAGTCCAAAAAGAAGAAGAGCATTATTGTATTAAAGACTATCTCCTTGGAAGTTGATCCCGGAGATGAAGATTGA
BLAST of CSPI04G17000 vs. TrEMBL
Match: A5AZ66_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004930 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 6.4e-61 Identity = 127/243 (52.26%), Postives = 162/243 (66.67%), Query Frame = 1
BLAST of CSPI04G17000 vs. TrEMBL
Match: A5C8K0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001808 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.4e-60 Identity = 122/237 (51.48%), Postives = 159/237 (67.09%), Query Frame = 1
BLAST of CSPI04G17000 vs. TrEMBL
Match: A5BKT6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006955 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.2e-60 Identity = 128/253 (50.59%), Postives = 163/253 (64.43%), Query Frame = 1
BLAST of CSPI04G17000 vs. TrEMBL
Match: A5AQM5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030841 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59 Identity = 127/243 (52.26%), Postives = 160/243 (65.84%), Query Frame = 1
BLAST of CSPI04G17000 vs. TrEMBL
Match: A5BQ25_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002411 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 3.5e-59 Identity = 122/227 (53.74%), Postives = 155/227 (68.28%), Query Frame = 1
BLAST of CSPI04G17000 vs. NCBI nr
Match: gi|778665012|ref|XP_011648465.1| (PREDICTED: uncharacterized protein LOC105434474 [Cucumis sativus]) HSP 1 Score: 459.5 bits (1181), Expect = 3.6e-126 Identity = 233/247 (94.33%), Postives = 235/247 (95.14%), Query Frame = 1
BLAST of CSPI04G17000 vs. NCBI nr
Match: gi|778730802|ref|XP_011659859.1| (PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]) HSP 1 Score: 459.5 bits (1181), Expect = 3.6e-126 Identity = 233/247 (94.33%), Postives = 235/247 (95.14%), Query Frame = 1
BLAST of CSPI04G17000 vs. NCBI nr
Match: gi|778688574|ref|XP_011652782.1| (PREDICTED: uncharacterized protein LOC105435092 [Cucumis sativus]) HSP 1 Score: 457.2 bits (1175), Expect = 1.8e-125 Identity = 232/247 (93.93%), Postives = 234/247 (94.74%), Query Frame = 1
BLAST of CSPI04G17000 vs. NCBI nr
Match: gi|778730824|ref|XP_011659862.1| (PREDICTED: uncharacterized protein LOC105436307, partial [Cucumis sativus]) HSP 1 Score: 390.2 bits (1001), Expect = 2.7e-105 Identity = 206/247 (83.40%), Postives = 208/247 (84.21%), Query Frame = 1
BLAST of CSPI04G17000 vs. NCBI nr
Match: gi|778708527|ref|XP_011656224.1| (PREDICTED: uncharacterized protein LOC105435679 [Cucumis sativus]) HSP 1 Score: 254.2 bits (648), Expect = 2.3e-64 Identity = 150/247 (60.73%), Postives = 156/247 (63.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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