CSPI04G08520 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTCTCACTTTCACTCTCTTCATATTGTGATTATCGAAATTCTTCCAAACGCCAAAATTTCCCATTTCCCTTTTCTCGCCTCTCCCGCTTCGCTCTTTCTTCTTTGATCTCATCGCCATTTCTCTTTTTATTTCTTTCTCAATCCCCCAACTCTCTCTCTTTTCATTCAGATCTCTTCTACATTCTCCTATTCTTCTTCTTCACCACTTCTCCATTTAACCCACAATCTCTTTCTACCTTCCCCATTCCTCTCCAATGGCCTCCTTCACTATCCCATGTCCCAAGGCTTCCACTCTTCCCAGTTTCGGCTCCAGTGCTCACAAGAATCGGCATTACAACCACATTAACCCCAATCTTTCTCTTAATCGCCTCTTCAAGGATTCCTTTTTGTTTGGATCTTCTTTTGTGGACTCCCCACTTTCTGGGGCTGAGGTATGTGACTGCCTTCAGTCCACATTCTTGTTATAACCTTCACTGACTTCATGTTTTTACCGTCTCTGGACTCTATATGTGCTCAACGTAATTTTTAACTTTGTAATATTTTTTTTAATTCTCTCTGGATAGATTCTGTTGGAAGGTTTTGGTATAAAACCATGTTGGTTGAGTGTAGGAAAGTAATTGATGGATTTGGGAACATTTTAAGTTCCAATTTTTGGGCCTACAAGAGGTCTCTTCGGTACGAGTTTCTAATTTCTTTTTGTCATAGTTATTTTCATTCGTGCCACTTTACTGTTCAATCAGAATCATAGCCTAGAGAAAGAAAGCTGATGAATTAAAGAATGATGAGAAAGAGCGAAGATAAGAGAAAGTGATGGTGTGTATTGGAAGGCTTAGTACAGGATTATTCACTGTTTTTGGGCTGTCTTGTGGAAGAGCAGATTGGTTCTTCTGTAGCTTCCTACACCCAGTTTCATTTCATTTTCTCAATGAAAATCGTTTGTTGTCCCAAAAGGAAGGTTCTGTTTTAGGTATTAAATTGTGGTGTTTAATTCAGTCGGCAGCATATCCAGCTTCTCTGTTTTGGTGTATTCAAGGGATTTAAATGGATCTCTTTTAGCTGGAGATCCTATCGGTCATCATTTGTAGTTCGTAGTGACGAACAGGAAACTGAAAGAAAATTTGTGTGCCTAACGGTTGATGTTTTAAACAAGTTCGGTGTAGAGGACATTTTGAAGCTGAATGATGGGGCAATACTGATGACTTTGTTGTCATCATCATAAGTTGTTCACAGATGTGTTTCTTGCTAATTTGTTTTTGAACTACAACTTATATGAGAAGAATTGTGTGTTAATGGAGCCTGTAAATTGTGAGATGTTTATGCTTCTAACTACATTTTGATCTTAGTATGTTATTCTTTTGTGCTTTTCAGTGGCCGAACAAGAAAAAGTCTACTGGTTTGGTTATGTATGCATTTAAAGAGGTTAGTTGTTGGAATGAACTTTTAGGTCTATGTAGATTTCTGAATGCATTCATTGATTTTAGGTGTGTATATATATTTTTTATAATCCTAGGTGGTGGTTGGAAAAACTTCAAATTCTGCTCCAGCCATTGTCTCTACACCTGGAAATGGTCCATCTGGAAGAAAAACCGAGTCTGCAGTCACAGTTTCTGATCAAGGTTCCCTTCCCGACGAGCTGTCAATTTCTACCTTCATGAGCCAAGTTTCAGATCTCGTCAAGTACGTTACTATCTTCCATAGTGTGTAGGAATTAAACTTTGAGAGTGTTGAGTTGCACCACCTTTTTTCATTGAGACTTTACATAATTTTTTCTTATATGCAGACTTGTAGATTCAAGAGACATAATGGAACTGCAACTAAAACAACAAGAATGCGAAATTTTAATAAGAAAAAAAGAAGCTATACAACCAACACCACCTGCACAGGCTCCAAGTCCATACATAGTATTGCCACCACCTCATGCGCATACCACGGTTGCACCTCCACCGATCCCAGCACCTGAGCCTAAAGCTACTTCTACTGCTACTGCAAGCCCTACCCCTGCCCCAAAAGCAGGTGGATCGCATCCACCTTTGAAATGCCCCATGGCCGGAACATTTTACCGAAGCCCTGCGCCGGGAGAACCTCCATTTGTGAAGGTAACTTGAAAATGATATAATAAAGGGAGAACAAAAATTTGTCAGGACTCGACACTTCTGTTTACTTGGAACTCGTTTCTCATATCTCACGTGTTCTGTTTTTGTAGGTTGGCGATAAAGTGCAGAAAGGCCAAGTGATATGTATAATTGAAGCCATGAAGTTAATGAATGAGATTGAGGTTAGCTTAGACAATGCTAACCATTTTATTTTTGTAAATTTAGATACATATGTAGTTGGTACTTATTCTATGTTCGACTTCAGGCTAATCAATCTGGAACCATAGCTGAAATACTGGTTGAAGATGGCAAAACAGTCAGCGTAGACACGGTACACTCTCTCCGTTGTCAATCATAGTGATACGAAATGCTTATATTCTGTTTTTGCCCTTGAAAACAATCTAAATGTTAAAATCTTCTTTTGTTGTGCAGCCTCTTCTTGTGATCGTACCTTGATAAACTAGAAGAGAGGACAACCTTTCGATCCATTGCCTTTTTTTTCTTCTTTATCTTCTCTCTTCTTTTAATTACTTTAGGTTCAAATTTGTTATAGATTTTACGCACTCAATGTGTACTTTTAACTAAATAAAGACGATCTTTTATTTATTGAACATGATGACCTCTTTTATTATGATTAATATTCAAATGTCTAACAATTTCTTCCCCTT ATGGCCTCCTTCACTATCCCATGTCCCAAGGCTTCCACTCTTCCCAGTTTCGGCTCCAGTGCTCACAAGAATCGGCATTACAACCACATTAACCCCAATCTTTCTCTTAATCGCCTCTTCAAGGATTCCTTTTTGTTTGGATCTTCTTTTGTGGACTCCCCACTTTCTGGGGCTGAGTGGCCGAACAAGAAAAAGTCTACTGGTTTGGTTATGTATGCATTTAAAGAGGTGGTGGTTGGAAAAACTTCAAATTCTGCTCCAGCCATTGTCTCTACACCTGGAAATGGTCCATCTGGAAGAAAAACCGAGTCTGCAGTCACAGTTTCTGATCAAGGTTCCCTTCCCGACGAGCTGTCAATTTCTACCTTCATGAGCCAAGTTTCAGATCTCGTCAAACTTGTAGATTCAAGAGACATAATGGAACTGCAACTAAAACAACAAGAATGCGAAATTTTAATAAGAAAAAAAGAAGCTATACAACCAACACCACCTGCACAGGCTCCAAGTCCATACATAGTATTGCCACCACCTCATGCGCATACCACGGTTGCACCTCCACCGATCCCAGCACCTGAGCCTAAAGCTACTTCTACTGCTACTGCAAGCCCTACCCCTGCCCCAAAAGCAGGTGGATCGCATCCACCTTTGAAATGCCCCATGGCCGGAACATTTTACCGAAGCCCTGCGCCGGGAGAACCTCCATTTGTGAAGGTTGGCGATAAAGTGCAGAAAGGCCAAGTGATATGTATAATTGAAGCCATGAAGTTAATGAATGAGATTGAGGCTAATCAATCTGGAACCATAGCTGAAATACTGGTTGAAGATGGCAAAACAGTCAGCGTAGACACGCCTCTTCTTGTGATCGTACCTTGA ATGGCCTCCTTCACTATCCCATGTCCCAAGGCTTCCACTCTTCCCAGTTTCGGCTCCAGTGCTCACAAGAATCGGCATTACAACCACATTAACCCCAATCTTTCTCTTAATCGCCTCTTCAAGGATTCCTTTTTGTTTGGATCTTCTTTTGTGGACTCCCCACTTTCTGGGGCTGAGTGGCCGAACAAGAAAAAGTCTACTGGTTTGGTTATGTATGCATTTAAAGAGGTGGTGGTTGGAAAAACTTCAAATTCTGCTCCAGCCATTGTCTCTACACCTGGAAATGGTCCATCTGGAAGAAAAACCGAGTCTGCAGTCACAGTTTCTGATCAAGGTTCCCTTCCCGACGAGCTGTCAATTTCTACCTTCATGAGCCAAGTTTCAGATCTCGTCAAACTTGTAGATTCAAGAGACATAATGGAACTGCAACTAAAACAACAAGAATGCGAAATTTTAATAAGAAAAAAAGAAGCTATACAACCAACACCACCTGCACAGGCTCCAAGTCCATACATAGTATTGCCACCACCTCATGCGCATACCACGGTTGCACCTCCACCGATCCCAGCACCTGAGCCTAAAGCTACTTCTACTGCTACTGCAAGCCCTACCCCTGCCCCAAAAGCAGGTGGATCGCATCCACCTTTGAAATGCCCCATGGCCGGAACATTTTACCGAAGCCCTGCGCCGGGAGAACCTCCATTTGTGAAGGTTGGCGATAAAGTGCAGAAAGGCCAAGTGATATGTATAATTGAAGCCATGAAGTTAATGAATGAGATTGAGGCTAATCAATCTGGAACCATAGCTGAAATACTGGTTGAAGATGGCAAAACAGTCAGCGTAGACACGCCTCTTCTTGTGATCGTACCTTGA
BLAST of CSPI04G08520 vs. Swiss-Prot
Match: BCCP2_ARATH (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=BCCP2 PE=2 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.7e-48 Identity = 139/294 (47.28%), Postives = 174/294 (59.18%), Query Frame = 1
BLAST of CSPI04G08520 vs. Swiss-Prot
Match: BCCP_SOYBN (Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glycine max GN=ACCB-1 PE=1 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 3.0e-47 Identity = 125/221 (56.56%), Postives = 150/221 (67.87%), Query Frame = 1
BLAST of CSPI04G08520 vs. Swiss-Prot
Match: BCCP1_ARATH (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Arabidopsis thaliana GN=BCCP1 PE=1 SV=2) HSP 1 Score: 188.3 bits (477), Expect = 1.1e-46 Identity = 118/232 (50.86%), Postives = 155/232 (66.81%), Query Frame = 1
BLAST of CSPI04G08520 vs. Swiss-Prot
Match: BCCP_NOSS1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=accB PE=1 SV=2) HSP 1 Score: 99.4 bits (246), Expect = 7.0e-20 Identity = 74/184 (40.22%), Postives = 104/184 (56.52%), Query Frame = 1
BLAST of CSPI04G08520 vs. Swiss-Prot
Match: BCCP_PSEAE (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=accB PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.8e-18 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = 1
BLAST of CSPI04G08520 vs. TrEMBL
Match: A0A0A0KVK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G092990 PE=4 SV=1) HSP 1 Score: 548.1 bits (1411), Expect = 6.4e-153 Identity = 286/290 (98.62%), Postives = 287/290 (98.97%), Query Frame = 1
BLAST of CSPI04G08520 vs. TrEMBL
Match: B9SJD0_RICCO (Biotin carboxyl carrier protein subunit of of Het-ACCase (BCCP2) OS=Ricinus communis GN=RCOM_0525570 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 8.0e-63 Identity = 157/291 (53.95%), Postives = 189/291 (64.95%), Query Frame = 1
BLAST of CSPI04G08520 vs. TrEMBL
Match: I1LWR8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G057400 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 4.0e-62 Identity = 164/295 (55.59%), Postives = 196/295 (66.44%), Query Frame = 1
BLAST of CSPI04G08520 vs. TrEMBL
Match: E6Y6R2_ARAHY (Biotin carboxyl carrier protein 2-4 OS=Arachis hypogaea GN=BCCP2-4 PE=2 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.2e-61 Identity = 159/295 (53.90%), Postives = 185/295 (62.71%), Query Frame = 1
BLAST of CSPI04G08520 vs. TrEMBL
Match: A0A067JTG2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19925 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 3.3e-61 Identity = 155/295 (52.54%), Postives = 192/295 (65.08%), Query Frame = 1
BLAST of CSPI04G08520 vs. TAIR10
Match: AT5G15530.1 (AT5G15530.1 biotin carboxyl carrier protein 2) HSP 1 Score: 193.7 bits (491), Expect = 1.5e-49 Identity = 139/294 (47.28%), Postives = 174/294 (59.18%), Query Frame = 1
BLAST of CSPI04G08520 vs. TAIR10
Match: AT5G16390.1 (AT5G16390.1 chloroplastic acetylcoenzyme A carboxylase 1) HSP 1 Score: 188.3 bits (477), Expect = 6.5e-48 Identity = 118/232 (50.86%), Postives = 155/232 (66.81%), Query Frame = 1
BLAST of CSPI04G08520 vs. NCBI nr
Match: gi|449438847|ref|XP_004137199.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic [Cucumis sativus]) HSP 1 Score: 548.1 bits (1411), Expect = 9.1e-153 Identity = 286/290 (98.62%), Postives = 287/290 (98.97%), Query Frame = 1
BLAST of CSPI04G08520 vs. NCBI nr
Match: gi|659101560|ref|XP_008451672.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic [Cucumis melo]) HSP 1 Score: 478.4 bits (1230), Expect = 8.9e-132 Identity = 253/290 (87.24%), Postives = 262/290 (90.34%), Query Frame = 1
BLAST of CSPI04G08520 vs. NCBI nr
Match: gi|1021502296|ref|XP_016194346.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like [Arachis ipaensis]) HSP 1 Score: 251.5 bits (641), Expect = 1.8e-63 Identity = 166/299 (55.52%), Postives = 194/299 (64.88%), Query Frame = 1
BLAST of CSPI04G08520 vs. NCBI nr
Match: gi|694361834|ref|XP_009360536.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic-like [Pyrus x bretschneideri]) HSP 1 Score: 250.8 bits (639), Expect = 3.0e-63 Identity = 162/297 (54.55%), Postives = 194/297 (65.32%), Query Frame = 1
BLAST of CSPI04G08520 vs. NCBI nr
Match: gi|255570278|ref|XP_002526099.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic [Ricinus communis]) HSP 1 Score: 248.8 bits (634), Expect = 1.1e-62 Identity = 157/291 (53.95%), Postives = 189/291 (64.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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