CSPI04G01680 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAGGTTAAGATATTCTACAAACTGAAAAGGTGGATACAATCTGAGAGAGGGGGCGAGACAAATTCAGGTATGAAAATGGCCTTCTTGACACCCCAAATAGTGCACTGAATTTCACACATATATCTGCCACAAATAGAAATATAGATAGGACGATTTAGTCATATAACAATATGTATCATAATTTGCGACGGATGTGCTTTGTTAACAAAGTTTATACTTTTCAGTTTTCAACCTGTATTATATTCTTATCTAAATTGATAAATTATGCCCGTGACATTAATATATAAGTTTCTATCATAGTGATAAATTATGTCCGTGACATTAATATATAAGTTTTTATCATATCGGTAGAATCCAAAATTCACAGATGTCACGATGAAGAGAACTGAAATCTCACAATGAAGAGGACTGAAATCCATGATGAAGAGGAAGACAATAACTCACGACGAAAACACAAATCTAGCAAAAACCCACATATTCGAATAATTCAAATAATTGAGAAATGGAACCTGAGAAACTTTTTTTTCCAATAAATCCTTATAAAGTGGAAAACGTTTCTATTTTTTTAACAAAAAAAAAAATAGAAAACCTTATCATACACCTATGTTTCTTAAAAAATAAAGAAAAAAAAATTGTAATTGATGACCATTTTAGGAACAATAATTAAGGACATAGCAACGCATTTAAAAAACAACAAATATAACAAAATTATCGCACTTGTATAGTTGATAGATTTCGTATGATGTATCACTGATAGACCAATATCATTAATAGAATTTGACAAATTTTGGTACATTTACAATTTTTTTAAAATGTTGTTATATACTTAATTATTTTAAATCTAATTGCTAAATTTACAACAACCCCTTCAAAAAAATTTGGTGCAAATCTATACATAAATTTAATCTTCTTCCTTTCTACTTATACATAAATTAAATATTTTTTTAATAAAAGAAATAACAAGATTAAACTAATATTTGGAGTTAGAAAATGGTGCCTCGTGGCAATAAAAAAGTAATTGAAAGACCATATCATGGTCATAACTATATTATCTATGAATTTGTTAACAACTCAAACCATAATATATAACTCAATTGTGTGACATTAATTACTAAGAAATTTATACTTGGAATCTTCCTATGATTCTTATATTAATTTTGAATTTTTAGTTGGTTAATTAAACTTATATATAAAGATTTATACCAAGTACACATTCTAGGACATTAATTATATATGAAATGGATGATGTATAATGAGTTGACAAGAATTGTATTTGTTTACTCTTAACGTGTAAAACGATGGTTTTATATTTATATACACATACCATTTTATTTTAATATGACAATTATTAATAGTGGTATGAAAAATAATTATTAGGTTGGTTGGTACTAAAGAAAGCAATATAAATAAAGAGGTTAGATCTAAGAGATGAGTAATTGGGTTGAGCTAGATCAAGGTTCTCTTCTTATGGATACATTAAAAGAAGAATCAAAGAAAATGGGGAAGGTTCATCAAATGACATTTGGGAGGAGAAAATGGACCAATGGAGACAAATTAAAAGCATCTCTCATTTTATCTTTTCACGTTCACCTTTTCATTTTAATTGGAGTGCATTTTGGGTTGCGTTTGTATTATATATTCTCACAGGTCTCTTTGGAATAAGTATTTCTTATCATAGAAATCTTTCCCATAAAAGTTTCAAACTTCCAAAATGGCTTGAATATGTATTTGCATATTGTGGAGTTCATGCAATTCAGGTTTGACCTTTTTGAACCATCCTTTGTCTTGCTATTTTGTTTGAATCTATTTTTATTTTGAATTAAACATTAGAACTTTCTATATTATTTTATAACGTTGAGATTAGAAGTATGTTTATTTACCTCAAAGAGACCCATCTTAAAAGAGAAGATGAGAAAGATGGGTGGGGATCTATCGGTTTAAATACTATTTTTGTCACCATAATTCTAGTTTTGGTTCTTTTCCGCTCTTGTACTTTAATAAATTTCATTGTCGCAACTATATATAATCTTTTAGCCTAATTCGTTCAATTTTGTTTATTTTATTCTTTGATGTATTTTTGAAAAATGAACCTCCAAAGGTAGAATATGATGACTTTTTTAAAGTATAAAATTCAACCCATTAACATTTTCGAAATAAATTAAAACTAAAAATACACAAAAAAGACTAAAGTAGTATATTTTTTTTCAACTTGAATATATCTTAATGTTATTTTTTCAAATCTTTTATTCCATAACTGCCATCTATAATCTAAAATATTGAAATAAGTTTCATATCTTGTTGTTTGGTTCATTTTAAATATTTATTTTTCTTTCTAATTGTAGGGTGATCCAATCGACTGGGTGAGCACACATAGATATCATCATCAACATACAGATACCGAAAGAGATCCACATAGTCCTGTACAAGGATTTTGGTTTAGTTACGTCATTTGGATCTTTGATACCATTACTTTAACCAAAAAAGTCTGTCCAGAGTATTTTATTGATTATAAAGATAAAAAAAGAGGTGCCTTTTCCTTGGTTACTAAATATGGAAGTCCAAATAATGTTGCTGATATGGAGGATGATCCATTTTATAGATTTATTCATGATACATACTTACTTCATCCAATTGCTCTTGGAGTCCTTCTCTACATTGTTGGAGGAACACCTTTTTTTATATGGGGAATGGTAAATAAATCTCTCTCCAAAACATGCATAAATTTATTTTTTTTTAAAAAAGGTTTCTTTTACTATCAATTTTAATATATATATCTACATATATAAAGGTTTATGACAATTAGGGATATATTGATATGATCTCTATTGATTCTGCAGTGTGTGAGGGCAACAGTGTACATGAATGTAGTGTTTATGATTAATTCAATTTGTCATTCATGGGGAAAGAAACAATGGAACACTAAAGATTCCACTAGAAATAATTGGTAAGTGCTTTATCGTGAATTCTTGTCATTTATTTTTCTTGTCATTTATTTACCTCACCAAATACAATCAAAATAGTTTCGAATTACGATTTGTAACGATTGAGTCTTTATATCGTAAAAAATATCATTATAGTTTAAGAAAATTGCTTACACATGTGTTGAGTTGATAAATTGATTAGAACATGTGTTGAGTTAATAAATTGATTAGAGATAATTTTTTTATTATTAATAATAAACTATAAAAATAGTGATAGAAATGACTGTCAGATTATAAATTTAATTATGTAATTCTATTATGGACTTTAATGAGTAGAAAACTTTTGATTTAAGAGTATAATGAAGGTGTTAATAAGAATGTCAACCTAGTAATTGAAATGTCTAAGTATGTTTAAAAACTCTCTTCCTCTACTATTTTATTCGAAAAAAGGAAAAATAACTTTTAAATATTTATCATAAATAGAAGTCAATATCATTATCGAGAGACCTAAATTAATGATTAAAATAGATAATCTATTTTTTTAAAAAAATAGATAATTACTTACTATTTGAACTGATACATACCTTTCACAACTCATGTAACAATAGAAGAAAAAGACACTATACACCATCGATTATTGTACCATTATCATTTAAGAACTAGGTAAACTGATAGAGGTGTGGGTGGTTATTGATGAATACCACAGTTGTTTAGCAATATACAATGAAGCCAGTACTATATCTTGTATGTTAAAAAGTTGTATATATATTATATTTAATGAAATCTATCATGATTGTTTGATTTTTGTTGCATTTGCTCAGGTGGATTAGTTTGCCTTCATTTGGAGAAAGTTGGCACAATAATCATCATGCGTTTGAATATTCAGCAAGAGCGGGGATTGAATGGTGGGAAGTTGACATTGGTTGGTATGTTATATTGTTTCTTCAAGCCATTGGGTTGGCCACTGATGTCAAACAACCCTCTCAAGCTCACATGCAAAGGCTATCTATGGACAAACCAAATGAAGACTATCAAGAATGA ATGGAGAAGGTTAAGATATTCTACAAACTGAAAAGGTGGATACAATCTGAGAGAGGGGGCGAGACAAATTCAGGTCTCTTTGGAATAAGTATTTCTTATCATAGAAATCTTTCCCATAAAAGTTTCAAACTTCCAAAATGGCTTGAATATGTATTTGCATATTGTGGAGTTCATGCAATTCAGGGTGATCCAATCGACTGGGTGAGCACACATAGATATCATCATCAACATACAGATACCGAAAGAGATCCACATAGTCCTGTACAAGGATTTTGGTTTAGTTACGTCATTTGGATCTTTGATACCATTACTTTAACCAAAAAAGTCTGTCCAGAGTATTTTATTGATTATAAAGATAAAAAAAGAGGTGCCTTTTCCTTGGTTACTAAATATGGAAGTCCAAATAATGTTGCTGATATGGAGGATGATCCATTTTATAGATTTATTCATGATACATACTTACTTCATCCAATTGCTCTTGGAGTCCTTCTCTACATTGTTGGAGGAACACCTTTTTTTATATGGGGAATGTGTGTGAGGGCAACAGTGTACATGAATGTAGTGTTTATGATTAATTCAATTTGTCATTCATGGGGAAAGAAACAATGGAACACTAAAGATTCCACTAGAAATAATTGGTGGATTAGTTTGCCTTCATTTGGAGAAAGTTGGCACAATAATCATCATGCGTTTGAATATTCAGCAAGAGCGGGGATTGAATGGTGGGAAGTTGACATTGGTTGGTATGTTATATTGTTTCTTCAAGCCATTGGGTTGGCCACTGATGTCAAACAACCCTCTCAAGCTCACATGCAAAGGCTATCTATGGACAAACCAAATGAAGACTATCAAGAATGA ATGGAGAAGGTTAAGATATTCTACAAACTGAAAAGGTGGATACAATCTGAGAGAGGGGGCGAGACAAATTCAGGTCTCTTTGGAATAAGTATTTCTTATCATAGAAATCTTTCCCATAAAAGTTTCAAACTTCCAAAATGGCTTGAATATGTATTTGCATATTGTGGAGTTCATGCAATTCAGGGTGATCCAATCGACTGGGTGAGCACACATAGATATCATCATCAACATACAGATACCGAAAGAGATCCACATAGTCCTGTACAAGGATTTTGGTTTAGTTACGTCATTTGGATCTTTGATACCATTACTTTAACCAAAAAAGTCTGTCCAGAGTATTTTATTGATTATAAAGATAAAAAAAGAGGTGCCTTTTCCTTGGTTACTAAATATGGAAGTCCAAATAATGTTGCTGATATGGAGGATGATCCATTTTATAGATTTATTCATGATACATACTTACTTCATCCAATTGCTCTTGGAGTCCTTCTCTACATTGTTGGAGGAACACCTTTTTTTATATGGGGAATGTGTGTGAGGGCAACAGTGTACATGAATGTAGTGTTTATGATTAATTCAATTTGTCATTCATGGGGAAAGAAACAATGGAACACTAAAGATTCCACTAGAAATAATTGGTGGATTAGTTTGCCTTCATTTGGAGAAAGTTGGCACAATAATCATCATGCGTTTGAATATTCAGCAAGAGCGGGGATTGAATGGTGGGAAGTTGACATTGGTTGGTATGTTATATTGTTTCTTCAAGCCATTGGGTTGGCCACTGATGTCAAACAACCCTCTCAAGCTCACATGCAAAGGCTATCTATGGACAAACCAAATGAAGACTATCAAGAATGA
BLAST of CSPI04G01680 vs. Swiss-Prot
Match: ADS3_ARATH (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana GN=ADS3 PE=1 SV=2) HSP 1 Score: 344.0 bits (881), Expect = 1.6e-93 Identity = 146/252 (57.94%), Postives = 189/252 (75.00%), Query Frame = 1
BLAST of CSPI04G01680 vs. Swiss-Prot
Match: ADS1_ARATH (Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana GN=ADS1 PE=2 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 5.7e-83 Identity = 137/252 (54.37%), Postives = 177/252 (70.24%), Query Frame = 1
BLAST of CSPI04G01680 vs. Swiss-Prot
Match: ADS2_ARATH (Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana GN=ADS2 PE=2 SV=2) HSP 1 Score: 307.0 bits (785), Expect = 2.2e-82 Identity = 135/252 (53.57%), Postives = 178/252 (70.63%), Query Frame = 1
BLAST of CSPI04G01680 vs. Swiss-Prot
Match: ADS32_ARATH (Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana GN=ADS3.2 PE=2 SV=3) HSP 1 Score: 298.9 bits (764), Expect = 5.9e-80 Identity = 128/244 (52.46%), Postives = 169/244 (69.26%), Query Frame = 1
BLAST of CSPI04G01680 vs. Swiss-Prot
Match: ADSL1_ARATH (Delta-9 desaturase-like 1 protein OS=Arabidopsis thaliana GN=At1g06090 PE=2 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 2.3e-76 Identity = 129/247 (52.23%), Postives = 169/247 (68.42%), Query Frame = 1
BLAST of CSPI04G01680 vs. TrEMBL
Match: A0A0A0KTF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006120 PE=3 SV=1) HSP 1 Score: 566.2 bits (1458), Expect = 2.2e-158 Identity = 259/262 (98.85%), Postives = 260/262 (99.24%), Query Frame = 1
BLAST of CSPI04G01680 vs. TrEMBL
Match: A0A0A0KVH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006060 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 5.7e-106 Identity = 165/259 (63.71%), Postives = 203/259 (78.38%), Query Frame = 1
BLAST of CSPI04G01680 vs. TrEMBL
Match: A0A0A0LTL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G227450 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 5.7e-106 Identity = 169/251 (67.33%), Postives = 201/251 (80.08%), Query Frame = 1
BLAST of CSPI04G01680 vs. TrEMBL
Match: A0A0A0LVX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G227460 PE=3 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 4.1e-104 Identity = 164/248 (66.13%), Postives = 198/248 (79.84%), Query Frame = 1
BLAST of CSPI04G01680 vs. TrEMBL
Match: A0A0A0KYH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006130 PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.3e-101 Identity = 160/249 (64.26%), Postives = 193/249 (77.51%), Query Frame = 1
BLAST of CSPI04G01680 vs. TAIR10
Match: AT3G15850.1 (AT3G15850.1 fatty acid desaturase 5) HSP 1 Score: 344.0 bits (881), Expect = 9.1e-95 Identity = 146/252 (57.94%), Postives = 189/252 (75.00%), Query Frame = 1
BLAST of CSPI04G01680 vs. TAIR10
Match: AT1G06080.1 (AT1G06080.1 delta 9 desaturase 1) HSP 1 Score: 308.9 bits (790), Expect = 3.2e-84 Identity = 137/252 (54.37%), Postives = 177/252 (70.24%), Query Frame = 1
BLAST of CSPI04G01680 vs. TAIR10
Match: AT2G31360.1 (AT2G31360.1 16:0delta9 desaturase 2) HSP 1 Score: 307.0 bits (785), Expect = 1.2e-83 Identity = 135/252 (53.57%), Postives = 178/252 (70.63%), Query Frame = 1
BLAST of CSPI04G01680 vs. TAIR10
Match: AT3G15870.1 (AT3G15870.1 Fatty acid desaturase family protein) HSP 1 Score: 298.9 bits (764), Expect = 3.3e-81 Identity = 128/244 (52.46%), Postives = 169/244 (69.26%), Query Frame = 1
BLAST of CSPI04G01680 vs. TAIR10
Match: AT1G06090.1 (AT1G06090.1 Fatty acid desaturase family protein) HSP 1 Score: 287.0 bits (733), Expect = 1.3e-77 Identity = 129/247 (52.23%), Postives = 169/247 (68.42%), Query Frame = 1
BLAST of CSPI04G01680 vs. NCBI nr
Match: gi|778697418|ref|XP_011654318.1| (PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 566.2 bits (1458), Expect = 3.2e-158 Identity = 259/262 (98.85%), Postives = 260/262 (99.24%), Query Frame = 1
BLAST of CSPI04G01680 vs. NCBI nr
Match: gi|659108473|ref|XP_008454217.1| (PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like isoform X1 [Cucumis melo]) HSP 1 Score: 532.7 bits (1371), Expect = 3.9e-148 Identity = 239/262 (91.22%), Postives = 253/262 (96.56%), Query Frame = 1
BLAST of CSPI04G01680 vs. NCBI nr
Match: gi|778689575|ref|XP_011652979.1| (PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 401.7 bits (1031), Expect = 1.0e-108 Identity = 169/253 (66.80%), Postives = 208/253 (82.21%), Query Frame = 1
BLAST of CSPI04G01680 vs. NCBI nr
Match: gi|659108481|ref|XP_008454222.1| (PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucumis melo]) HSP 1 Score: 396.7 bits (1018), Expect = 3.3e-107 Identity = 170/259 (65.64%), Postives = 207/259 (79.92%), Query Frame = 1
BLAST of CSPI04G01680 vs. NCBI nr
Match: gi|659108471|ref|XP_008454216.1| (PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucumis melo]) HSP 1 Score: 396.4 bits (1017), Expect = 4.4e-107 Identity = 169/257 (65.76%), Postives = 206/257 (80.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |