CSPI03G36800 (gene) Wild cucumber (PI 183967)

NameCSPI03G36800
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Descriptionarabinogalactan protein 23
LocationChr3 : 31940061 .. 31940240 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGTGACCTGTGCCGTCCTTGTTGCCGCTGCCGCCGTGAGTGCTACTATGGCTGTCAGTGAAGGGCCAGCTGCCGCGCCAGCTGCCGCACCTGGCCCATCCTCCGATGCAGCTGCTGCTTTGCCAGCTGTTGGAGCCTTCATTGGTGCTTCTCTCCTATCTTTCTTTGCCTACTACTTG

mRNA sequence

CAGGTGACCTGTGCCGTCCTTGTTGCCGCTGCCGCCGTGAGTGCTACTATGGCTGTCAGTGAAGGGCCAGCTGCCGCGCCAGCTGCCGCACCTGGCCCATCCTCCGATGCAGCTGCTGCTTTGCCAGCTGTTGGAGCCTTCATTGGTGCTTCTCTCCTATCTTTCTTTGCCTACTACTTG

Coding sequence (CDS)

CAGGTGACCTGTGCCGTCCTTGTTGCCGCTGCCGCCGTGAGTGCTACTATGGCTGTCAGTGAAGGGCCAGCTGCCGCGCCAGCTGCCGCACCTGGCCCATCCTCCGATGCAGCTGCTGCTTTGCCAGCTGTTGGAGCCTTCATTGGTGCTTCTCTCCTATCTTTCTTTGCCTACTACTTG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G36800.1CSPI03G36800.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34672FAMILY NOT NAMEDcoord: 2..60
score: 1.7
NoneNo IPR availablePANTHERPTHR34672:SF2ARABINOGALACTAN PEPTIDE 23-RELATEDcoord: 2..60
score: 1.7

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None