CSPI03G34630 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G34630
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 30426256 .. 30426597 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCACCAAATAGTTAGTAAAATAGATCCTTCAGGTATTCTAAATTGCAAGTCTCTTCTCAGCATGCTAACTGCAGATCACCCTGCACCAAAGGCATCGTTCAAGGCTCTACGGAAAGGTAAATGCCCTAATACCATAGAAGGGTGAAAGTAATCCTCTAGACTACTCTTCTTTAAGTATTGAGAACAAATCACTGGTTACAAGCAAGAATTCTCTCAAGTAATGGCGGTCTCTACCCACACTGCAATATGAAATATCCTCTGTTTCACAGATGGAAAATGCCAGCCGTTTGATCTTTACTTGGCACATCTGGAGAAGCTTATGGTGGAGGCCTTTTAG

mRNA sequence

ATGAAGCACCAAATAGTTAGTAAAATAGATCCTTCAGGTATTCTAAATTGCAAGTCTCTTCTCAGCATGCTAACTGCAGATCACCCTGCACCAAAGGCATCGTTCAAGGCTCTACGGAAAGATGGAAAATGCCAGCCGTTTGATCTTTACTTGGCACATCTGGAGAAGCTTATGGTGGAGGCCTTTTAG

Coding sequence (CDS)

ATGAAGCACCAAATAGTTAGTAAAATAGATCCTTCAGGTATTCTAAATTGCAAGTCTCTTCTCAGCATGCTAACTGCAGATCACCCTGCACCAAAGGCATCGTTCAAGGCTCTACGGAAAGATGGAAAATGCCAGCCGTTTGATCTTTACTTGGCACATCTGGAGAAGCTTATGGTGGAGGCCTTTTAG
Homology
[Close]
BLAST of CSPI03G34630 vs. TrEMBL
Match: A0A0A0LAU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G769700 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MKHQIVSKIDPSGILNCKSLLSMLTADHPAPKASFKALRKDGKCQPFDLYLAHLEKLMVE 60
          MKHQIVSKIDPSGILNCKSLLSMLTADHPAPKASFKALRKDGKCQPFDLYLAHLEKLMVE
Sbjct: 1  MKHQIVSKIDPSGILNCKSLLSMLTADHPAPKASFKALRKDGKCQPFDLYLAHLEKLMVE 60

Query: 61 AF 63
          AF
Sbjct: 61 AF 62

[Close]
BLAST of CSPI03G34630 vs. NCBI nr
Match: gi|700203972|gb|KGN59105.1| (hypothetical protein Csa_3G769700 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 1.7e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MKHQIVSKIDPSGILNCKSLLSMLTADHPAPKASFKALRKDGKCQPFDLYLAHLEKLMVE 60
          MKHQIVSKIDPSGILNCKSLLSMLTADHPAPKASFKALRKDGKCQPFDLYLAHLEKLMVE
Sbjct: 1  MKHQIVSKIDPSGILNCKSLLSMLTADHPAPKASFKALRKDGKCQPFDLYLAHLEKLMVE 60

Query: 61 AF 63
          AF
Sbjct: 61 AF 62

The following BLAST results are available for this feature:
BLAST of CSPI03G34630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G34630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAU5_CUCSA1.2e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G769700 PE=4 SV=1[more]
BLAST of CSPI03G34630 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G34630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203972|gb|KGN59105.1|1.7e-27100.00hypothetical protein Csa_3G769700 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G34630.1CSPI03G34630.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G34630Csa3G769700Cucumber (Chinese Long) v2cpicuB120
CSPI03G34630CsaV3_7G018520Cucumber (Chinese Long) v3cpicucB196
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G34630Watermelon (97103) v2cpiwmbB263
CSPI03G34630Wax gourdcpiwgoB346
CSPI03G34630Cucumber (Gy14) v1cgycpiB423
CSPI03G34630Cucurbita maxima (Rimu)cmacpiB016
CSPI03G34630Cucurbita moschata (Rifu)cmocpiB007
CSPI03G34630Melon (DHL92) v3.5.1cpimeB183
CSPI03G34630Watermelon (Charleston Gray)cpiwcgB181
CSPI03G34630Watermelon (97103) v1cpiwmB186
CSPI03G34630Cucurbita pepo (Zucchini)cpecpiB780
CSPI03G34630Bottle gourd (USVL1VR-Ls)cpilsiB179
CSPI03G34630Melon (DHL92) v3.6.1cpimedB178
CSPI03G34630Cucumber (Gy14) v2cgybcpiB318
CSPI03G34630Silver-seed gourdcarcpiB0940