CSPI03G25060 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGGAAAAAGATGGAATAGAACTGATGTAGTTGTGGACAACATTTTTGTATATAATGTTGCACATAATATCACTCATGAAAATGAGGATTCTGAACCTAAATCTGTTGAAGAATGTTGTAATAGAAAGGATTGGCCCAAGTGGAAAGAAGTCATCCAAGCAAAATTGAACTCACTTTCAAAACGTGAAGTTTGTGGACCTGTAGTTCATACACCTAAAGGTGTAAAACCTATGGGATTTAAATGGGTATTTGTGCATAAAAGAAATGAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGCACAAGGATTTTCTCAAAGACGGGGCATTGATTATGAGGAAACGTATTCTCATGTAGTGGATGTCATTACATTAAGATATCTAATTAGTCTGACTGTATGTGAAAAGCTTGATATGCATCTTATGGATGTAGTTACAACATATCTGTATGGATTTTTGGAAAATGAGATTTATATGAAAATCCCTGAAGGATTTAAGATACTTGAATCATATAATTCAAAATCTAGAGAATTATATTCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTACAATCGCTTAAGTGAATATTTATTGAAGGAAGGTTATCAAAATAACCCAATTTGTCCATGTGTTTTTATTAAGAAATCACAGTCAAGATTTGCTATTATAGTTGTATATGTTGATGATTTAAATATAATTGGAACTCCTAAGAGCTTTCAAAGTCAATAGAATATTTCAAAAATGAATTCAAGATGAAAGATCTTAGCAAAACAAAATTTTGCCTTGGCTTGCAAATCGAGCATTTAGCTAATGGAATTTTTATTCATCAATCGACATATACATAAAAGATTTTAAAAAGATTCTACATGGACAAAGCACACCCATTGAACATTTCAATGGTGGTTCGATCACTAGATGTGAAAAGGGACATCTTTCGACCTCAAGAAGATAATGAAGAATTACTTGGTTCTGAAGTACCATACTTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACGAGACCATATATAGCATTTTCAGTAAATTTATTAGCAAGATATAATTCTTCTCCAACGAAAAGACATTGGAATGAAATTAAGCATGTACTTCGTTATCTTCGAGGGGCAATTGATATGGTTTTGTTTTATTCAAACAAATCAAACTTTGATTTAGTTGGTTATGCAGATGTTGGATATTTATATGATCCACATAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACGACTATATCTTGGCGATTTGTAA ATGACAGGAAAAAGATGGAATAGAACTGATGTAGTTGTGGACAACATTTTTGTATATAATGTTGCACATAATATCACTCATGAAAATGAGGATTCTGAACCTAAATCTGTTGAAGAATGTTGTAATAGAAAGGATTGGCCCAAGTGGAAAGAAGTCATCCAAGCAAAATTGAACTCACTTTCAAAACGTGAAGTTTGTGGACCTGTAGTTCATACACCTAAAGGTGTAAAACCTATGGGATTTAAATGGGTATTTGTGCATAAAAGAAATGAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGCACAAGGATTTTCTCAAAGACGGGGCATTGATTATGAGGAAACGTATTCTCATGTAGTGGATGTCATTACATTAAGATATCTAATTAGTCTGACTGTATGTGAAAAGCTTGATATGCATCTTATGGATGTAGTTACAACATATCTGTATGGATTTTTGGAAAATGAGATTTATATGAAAATCCCTGAAGGATTTAAGATACTTGAATCATATAATTCAAAATCTAGAGAATTATATTCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTACAATCGCTTAAGTGAATATTTATTGAAGGAAGATGTGAAAAGGGACATCTTTCGACCTCAAGAAGATAATGAAGAATTACTTGGTTCTGAAATGTTGGATATTTATATGATCCACATAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACGACTATATCTTGGCGATTTGTAA ATGACAGGAAAAAGATGGAATAGAACTGATGTAGTTGTGGACAACATTTTTGTATATAATGTTGCACATAATATCACTCATGAAAATGAGGATTCTGAACCTAAATCTGTTGAAGAATGTTGTAATAGAAAGGATTGGCCCAAGTGGAAAGAAGTCATCCAAGCAAAATTGAACTCACTTTCAAAACGTGAAGTTTGTGGACCTGTAGTTCATACACCTAAAGGTGTAAAACCTATGGGATTTAAATGGGTATTTGTGCATAAAAGAAATGAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGCACAAGGATTTTCTCAAAGACGGGGCATTGATTATGAGGAAACGTATTCTCATGTAGTGGATGTCATTACATTAAGATATCTAATTAGTCTGACTGTATGTGAAAAGCTTGATATGCATCTTATGGATGTAGTTACAACATATCTGTATGGATTTTTGGAAAATGAGATTTATATGAAAATCCCTGAAGGATTTAAGATACTTGAATCATATAATTCAAAATCTAGAGAATTATATTCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTACAATCGCTTAAGTGAATATTTATTGAAGGAAGATGTGAAAAGGGACATCTTTCGACCTCAAGAAGATAATGAAGAATTACTTGGTTCTGAAATGTTGGATATTTATATGATCCACATAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACGACTATATCTTGGCGATTTGTAA
BLAST of CSPI03G25060 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-28 Identity = 67/180 (37.22%), Postives = 113/180 (62.78%), Query Frame = 1
BLAST of CSPI03G25060 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 115.9 bits (289), Expect = 6.5e-25 Identity = 70/178 (39.33%), Postives = 102/178 (57.30%), Query Frame = 1
BLAST of CSPI03G25060 vs. Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.3e-09 Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 1
BLAST of CSPI03G25060 vs. Swiss-Prot
Match: YO11B_YEAST (Transposon Ty1-OL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY1B-OL PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06 Identity = 35/114 (30.70%), Postives = 57/114 (50.00%), Query Frame = 1
BLAST of CSPI03G25060 vs. Swiss-Prot
Match: YA11B_YEAST (Truncated transposon Ty1-A Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY1B-A PE=3 SV=3) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06 Identity = 37/119 (31.09%), Postives = 61/119 (51.26%), Query Frame = 1
BLAST of CSPI03G25060 vs. TrEMBL
Match: A5B4M9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015758 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 1.6e-83 Identity = 150/210 (71.43%), Postives = 180/210 (85.71%), Query Frame = 1
BLAST of CSPI03G25060 vs. TrEMBL
Match: A5AK32_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038102 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 6.9e-82 Identity = 147/210 (70.00%), Postives = 178/210 (84.76%), Query Frame = 1
BLAST of CSPI03G25060 vs. TrEMBL
Match: A5B8K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030674 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.5e-81 Identity = 146/210 (69.52%), Postives = 180/210 (85.71%), Query Frame = 1
BLAST of CSPI03G25060 vs. TrEMBL
Match: Q949J4_SOLLC (Putative copia-like polyprotein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.9e-79 Identity = 161/260 (61.92%), Postives = 192/260 (73.85%), Query Frame = 1
BLAST of CSPI03G25060 vs. TrEMBL
Match: A5C3N6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003488 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 4.2e-79 Identity = 144/210 (68.57%), Postives = 174/210 (82.86%), Query Frame = 1
BLAST of CSPI03G25060 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8) HSP 1 Score: 102.4 bits (254), Expect = 4.2e-22 Identity = 49/137 (35.77%), Postives = 85/137 (62.04%), Query Frame = 1
BLAST of CSPI03G25060 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10 Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 1
BLAST of CSPI03G25060 vs. NCBI nr
Match: gi|147766872|emb|CAN60947.1| (hypothetical protein VITISV_015758 [Vitis vinifera]) HSP 1 Score: 317.4 bits (812), Expect = 2.4e-83 Identity = 150/210 (71.43%), Postives = 180/210 (85.71%), Query Frame = 1
BLAST of CSPI03G25060 vs. NCBI nr
Match: gi|147852133|emb|CAN80162.1| (hypothetical protein VITISV_038102 [Vitis vinifera]) HSP 1 Score: 312.0 bits (798), Expect = 9.9e-82 Identity = 147/210 (70.00%), Postives = 178/210 (84.76%), Query Frame = 1
BLAST of CSPI03G25060 vs. NCBI nr
Match: gi|147820682|emb|CAN69821.1| (hypothetical protein VITISV_030674 [Vitis vinifera]) HSP 1 Score: 310.8 bits (795), Expect = 2.2e-81 Identity = 146/210 (69.52%), Postives = 180/210 (85.71%), Query Frame = 1
BLAST of CSPI03G25060 vs. NCBI nr
Match: gi|15144516|gb|AAK84483.1| (putative copia-like polyprotein [Solanum lycopersicum]) HSP 1 Score: 303.9 bits (777), Expect = 2.7e-79 Identity = 161/260 (61.92%), Postives = 192/260 (73.85%), Query Frame = 1
BLAST of CSPI03G25060 vs. NCBI nr
Match: gi|147816183|emb|CAN68598.1| (hypothetical protein VITISV_003488 [Vitis vinifera]) HSP 1 Score: 302.8 bits (774), Expect = 6.0e-79 Identity = 144/210 (68.57%), Postives = 174/210 (82.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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