CSPI03G23140 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAGAATCTGCTCTAAGCTCTTTGGAAAGAATCATGAGAAAGTTCTTTTGGAAAGGAAACAAGGTAGGAAAGCTAAACCACCTAGTAAAATGGGATGCTGTAATTAAATCCTACAAAGATGGAGGACTTAGTTTGGGCAAGTTGAAGCACAAGAATATGGCCCTATTGTCTAAGTGGGGATGGCGTTTCTCAAAAGAACAAAATTCACTTTGGTGTCAAGTGATCATAAGCATTCATGGAAGTAGTACTTTCAACTGGCATTCAAATGAAAAAGAAACCGTGAGTCTAAGAAGTCCTTGGATTAGCATATCAAGGCAATAGCGCAAAATTGACTCATTGGCTCTTTTCAAATTAGGTGATGGCAGCAAAATATTGTTTTGGAAGCACCCTTGGATGGACATTATCACTTTGGAGCGTAAATTTCCAAGATTGGTTAGGATCGCACTCAATCCAAATGGGTCTGTTTCAAATCATTGGGACTCTTCAACCAACTCTTGGTCCATCTATTTCAGAAGATCGCTAAATGATGAGGAAATTTTAGATTTTCGGACCTTGTTGAGTCAGATTTCTCCTTCACAGTCAGCCTCATTTCCAGATCAAAGGTTTTGGTCCCTTGAAACCTCAGGTTCCTTCTTGGTAAAATCACTGGTTAAGCATCTTTCGACATCTTCTCCATTGGAAAGTTTTTTGTACAAAAGGTTTTGGAAATCTAACAGTCCAAGAAGGATAAATATTTCCATATGGATTATGCTCTTCGAAAATTTAGACTGTGCCTCAGTACTTCAAAGAAAGCTTTCCTCCCATGCCCTCTCACCTTATGTCTGCCCCCTTTGTGTTAATAACATGGAAAACATCCGGCATATTTTATTTGATTGTGTCTTTGGTTTTAAATGTTGGGTCCACCTTCTCCAAGCATTCAATTTTTGTTGGGTTTTTTATCATGTTTTTAAGAACAATGTGTCTCAAATTCTTGCTGGTCCAGACTTGAAGAAGAAGACAGCGGAACTATAGTGGGCAAACGCAGTAAAAGCACTTTTAGCTGAAATTTGGTTTGAAAGAAACCAAAGAGTCTTCCATGATAACTCATTGACTTGGATGGAACGCTATGATTCTGCTCGTTTGAATGCATCTTCATGGTGCTTATTATCTAAATATTTTCAAGATTACTCTTCGCAGGAGATTGTTCTAAATTGGCCAGCCTTTATAGTCTCCCCACCTTGAAGTTCTAGATTATCATGTCTCCCGGATCAGCCTTCTACTTCAATATGTTTTTGCTCAATCAAGGACTCAGCTTGGTGCCTTGTGA ATGCCAGAATCTGCTCTAAGCTCTTTGGAAAGAATCATGAGAAAGTTCTTTTGGAAAGGAAACAAGGTAGGAAAGCTAAACCACCTAGTAAAATGGGATGCTGTAATTAAATCCTACAAAGATGGAGGACTTAGTTTGGGCAAGTTGAAGCACAAGAATATGGCCCTATTGTCTAAGTGGGGATGGCGTTTCTCAAAAGAACAAAATTCACTTTGGTGTCAAGTGATCATAAGCATTCATGGAAGTAGTACTTTCAACTGGCATTCAAATGAAAAAGAAACCCACCCTTGGATGGACATTATCACTTTGGAGCGTAAATTTCCAAGATTGGTTAGGATCGCACTCAATCCAAATGGGTCTGTTTCAAATCATTGGGACTCTTCAACCAACTCTTGGTCCATCTATTTCAGAAGATCGCTAAATGATGAGGAAATTTTAGATTTTCGGACCTTGTTGAGTCAGATTTCTCCTTCACAGTCAGCCTCATTTCCAGATCAAAGGTTTTGGTCCCTTGAAACCTCAGGTTCCTTCTTGGTAAAATCACTGGTTAAGCATCTTTCGACATCTTCTCCATTGGAAAGTTTTTTGTACAAAAGGTTTTGGAAATCTAACAGTCCAAGAAGGATAAATATTTCCATATGGATTATGCTCTTCGAAAATTTAGACTGTGCCTCAGTACTTCAAAGAAAGCTTTCCTCCCATGCCCTCTCACCTTATGTCTGCCCCCTTTGTAACAATGTGTCTCAAATTCTTGCTGGTCCAGACTTGAAGAAGAAGACAGCGGAACTATACCTTCTACTTCAATATGTTTTTGCTCAATCAAGGACTCAGCTTGGTGCCTTGTGA ATGCCAGAATCTGCTCTAAGCTCTTTGGAAAGAATCATGAGAAAGTTCTTTTGGAAAGGAAACAAGGTAGGAAAGCTAAACCACCTAGTAAAATGGGATGCTGTAATTAAATCCTACAAAGATGGAGGACTTAGTTTGGGCAAGTTGAAGCACAAGAATATGGCCCTATTGTCTAAGTGGGGATGGCGTTTCTCAAAAGAACAAAATTCACTTTGGTGTCAAGTGATCATAAGCATTCATGGAAGTAGTACTTTCAACTGGCATTCAAATGAAAAAGAAACCCACCCTTGGATGGACATTATCACTTTGGAGCGTAAATTTCCAAGATTGGTTAGGATCGCACTCAATCCAAATGGGTCTGTTTCAAATCATTGGGACTCTTCAACCAACTCTTGGTCCATCTATTTCAGAAGATCGCTAAATGATGAGGAAATTTTAGATTTTCGGACCTTGTTGAGTCAGATTTCTCCTTCACAGTCAGCCTCATTTCCAGATCAAAGGTTTTGGTCCCTTGAAACCTCAGGTTCCTTCTTGGTAAAATCACTGGTTAAGCATCTTTCGACATCTTCTCCATTGGAAAGTTTTTTGTACAAAAGGTTTTGGAAATCTAACAGTCCAAGAAGGATAAATATTTCCATATGGATTATGCTCTTCGAAAATTTAGACTGTGCCTCAGTACTTCAAAGAAAGCTTTCCTCCCATGCCCTCTCACCTTATGTCTGCCCCCTTTGTAACAATGTGTCTCAAATTCTTGCTGGTCCAGACTTGAAGAAGAAGACAGCGGAACTATACCTTCTACTTCAATATGTTTTTGCTCAATCAAGGACTCAGCTTGGTGCCTTGTGA
BLAST of CSPI03G23140 vs. Swiss-Prot
Match: RNHX1_ARATH (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11 Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = 1
BLAST of CSPI03G23140 vs. TrEMBL
Match: A5BPI6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008538 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 9.5e-37 Identity = 99/282 (35.11%), Postives = 145/282 (51.42%), Query Frame = 1
BLAST of CSPI03G23140 vs. TrEMBL
Match: A5BRJ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014785 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36 Identity = 97/272 (35.66%), Postives = 140/272 (51.47%), Query Frame = 1
BLAST of CSPI03G23140 vs. TrEMBL
Match: A5BN97_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009103 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34 Identity = 97/282 (34.40%), Postives = 142/282 (50.35%), Query Frame = 1
BLAST of CSPI03G23140 vs. TrEMBL
Match: A5B0H6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006235 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 8.3e-33 Identity = 88/254 (34.65%), Postives = 132/254 (51.97%), Query Frame = 1
BLAST of CSPI03G23140 vs. TrEMBL
Match: A5BI72_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000131 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.4e-32 Identity = 92/282 (32.62%), Postives = 136/282 (48.23%), Query Frame = 1
BLAST of CSPI03G23140 vs. NCBI nr
Match: gi|147798966|emb|CAN68165.1| (hypothetical protein VITISV_008538 [Vitis vinifera]) HSP 1 Score: 162.2 bits (409), Expect = 1.4e-36 Identity = 99/282 (35.11%), Postives = 145/282 (51.42%), Query Frame = 1
BLAST of CSPI03G23140 vs. NCBI nr
Match: gi|657990185|ref|XP_008387315.1| (PREDICTED: uncharacterized protein LOC103449768 [Malus domestica]) HSP 1 Score: 162.2 bits (409), Expect = 1.4e-36 Identity = 97/283 (34.28%), Postives = 144/283 (50.88%), Query Frame = 1
BLAST of CSPI03G23140 vs. NCBI nr
Match: gi|147775063|emb|CAN77207.1| (hypothetical protein VITISV_014785 [Vitis vinifera]) HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36 Identity = 97/272 (35.66%), Postives = 140/272 (51.47%), Query Frame = 1
BLAST of CSPI03G23140 vs. NCBI nr
Match: gi|658018704|ref|XP_008344711.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]) HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36 Identity = 98/283 (34.63%), Postives = 144/283 (50.88%), Query Frame = 1
BLAST of CSPI03G23140 vs. NCBI nr
Match: gi|147854320|emb|CAN83427.1| (hypothetical protein VITISV_009103 [Vitis vinifera]) HSP 1 Score: 154.8 bits (390), Expect = 2.2e-34 Identity = 97/282 (34.40%), Postives = 142/282 (50.35%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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