CSPI03G21010 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G21010
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTransposon Ty3-I Gag-Pol polyprotein
LocationChr3 : 17104476 .. 17107556 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTTTCATTGGGAGAATTTTTGGTGATTCTACAAGGGGACAGAAGCCTCGTAAAATCACAGGTGTCACTAAAATCAATGATAAAGACTTTTGAGAAGGAAGATCAAGGAGTGTTAATCGAGTTGAGTACAATCGAACAATAGGGAGCGGAAGAGTCAAAGAATAATTTAGCGGACTGTCTGAGTAATCTAAAACTCGAAGTTCAAAGAATTCTTTTGTCTTTTGGTAGTGTGTTTGAATCCAGAAATCAGTTGACACCACCTCGCAATCATGATCCAGGGGCCCGGGCGGTGAATGTGCGGCCTTATCGTTATCCCCAATTCCAGAAAGATGAAATTGAAAAATTAGTAAAGGAAATGTTGTAAGCCGAAATTATCCAGCCAAGCAAAAGTGCCTTTTCAAGTCCGGTGCTCCTTGTAAAGAAGAAAGATGGTAGCTGGTGATTCTGCGTGGATTACCGAGCACTGAATCTTGGCACCATACCAGATAAGTATCCAATTCCCGTTGTTGATGAACTACTAGATGAATTATTCGGGGCAACCATATTTTCAAAAATTGATCTAAAGTCAGGCTATCACCAGATTAGAGTGCGAGTCGCCGATGTTCACAAAACGGCGCTTCGTACCCATGAAGGGCACTACGAATTTCTCGTGATGCCATTTGGGTTGAAGAATGCTCCAGCCACTTTTCAATCAGGAATGAATGATATTCTCCGCCCATACTTACGCAAATTTGTTTTGGTTTTCTTCGACGATATCCTAATCTACAACAAGTCACTAGAAGAACATTTGCAGCAATTGGTCGTGGTTTTAGAAACCTTAGTAGTTCATAAACTGGTGGCGAATTTTAAAAAATGTCAATTCGCAGTAGATCGAATTGAATATTTGGGTCACATTATCTCATCTGATGGGGTGGCGGCGGATCCAACGAAAATAATGGCTATGGTTAAATGACCAGCACCCAAGAATGTGAAGGAATTACAAGGTTTCTTGGGTCTTACAGGTTATTATCGGAAATTTGTGGCAAACTATGGTTCTATTGCACTACCCTTGACACAATTGTTAAAGAAAGGAAAGTTTCAGTGGAATGAGACAGCAAAAAATGCGTTCCAACAATTAAAATTTGCTATGATGTCGGTACCGGTGTTAGGTATTCCAGATTTTCCCAAGGTTTTGTGCTGGAAACTGATGTTTCAGGTGTTGATATTGGGGCTGTCCTAATGCATCATCAACGTCCAGTGGCTTTTTCAGTCAAGCTTTGCCCGATACCCATAGGTTTAAAGCTGTGTATGAACGGGAACTTATGGCAATCGTGCGGGCTGTTCAAAAATGGTGCCCATATCTGTTAGGTAAGCCTTTTGTGGTGCGTACAGATAAAAAAAGTTTGAAGTTTCTTCTTGAACAACGAGCCATTGGGGGAGAATATCAGAGATGGATCACTAAACTATTGGGGTATGATTTTGTGATTGAATACAAGAAAGGAATGGAAAATAAAGCGGCTAATGCTTTATCACGATTACCACCGGTATTTGAATTGGGCCTCATAAGTGTTGTGAGCGGGCTCAATCCTTCGATTTTCATTGATCAAGTGGCTGGGAATGAAGCTCTGAATAGTATTCGGTTATCCTTGATAAATGGACAGCCAACCCCGGAGGGATATTCACTACATAGAGAGGTTCTATGCTATCACGGCCGGTTGGTTCTTTCGGAGGATTCCCCTACTATCCCCTTATTATTAGCGGAGTTTCATAACAGCCCGATAGGGGGACATCATGGCGCGTTGACAACATATCAAAGGCTAGCAAGGGAGGTATATTGGCGAGGTATGAAAGCACACATCCGCACATATGTTGCCGAATGTTCGGTTTGTCAACAAGCCAAATATTTGTCATTAACTCCAGCCGGTCTTCTTCAAGCATTACCCATTCCGGACCGTGTATGGGAGGATATTAGTATGGATTTTATTGAGGGTCTTCCTAAATCTGAGTGCTATGATGTCATATTGGTGGTTGTGGATAGACTTTCCAAGTATGCACATTTCATTCCTTTGAAGCATCCTTTTGGTGCAAAAGTTGTAGCTGCTGTTTTTATGCGGGAAATCATTCATTTGCATGGATGCCCCCGAAGTATAGTGTCGGATCGTGATCGTATTTTCACAAGTCTATTTTGGGAGGAGTTGTGGCGGTTGTTGGGAACTTAGTTAAGACTAAGCACCACCTACCATCCCCAAACAGATGGTCAAACCGAAGTTGTCAATCGAGGGGTGGAGACGTATCTACGATGTTTTGCTATGAACACACCTAAGCAGTGGGCTAAATGGCTAGCTTGGGCTGAATTGAGCTATAATACAACTGTCCATACAGCCATATTGATGACCCCCTTCGAGGCTCACTATGGTCGACCACCTCCCTCTATATTACCATGCGTGAAGGAGTCGAGCCCGGTGAATGAAGTAGATCATTTGATGAAGGAAAGAGATGGAATTCTGAGAATTTTGAAGGCCAATTTATTGAAGGCACAACAGCGAATGGTCAAATACGCCAAATTGACCGACGGGAGGTACAGTTTGAGGTGGATGATTGGGTTTATGTGAAGTTACGCCCTTACCGCCAGTCCTCTCTCACCCATTTTAAGCACCCCAAATTGGCCCCAAGATTCATTGGCCCATTTGTCATTGTGGCACGAATTGGTCTGGTTGCATATCGTTTGGCTCTTCCCAAGGAGTCGCTTATTCACCCGGTCTTTCATGTTTCGATTCTTTAAAAAGCCGTAGGTTCAAACAGGCCTCTATTTCCAATTCCAAAAGATTTGGCTGCTGATTTGTCGATGCAATTGTCTCCGGTAGAGGTGTTGGGAGTTCGCAAAACCAGAGAAAAGGGGGACAAGTTAGAAGTTTTGATTTTCTGGAGTGACGGTACACCTGAAAGTGCTACATGGGAACAAGCCACTCTTATTCAAGAACAATTTCTTGAATTCCACCTTGAGGACAAGGTGGCTCTTTGGGGGGCGGGCAATGATAGACCCCACATAGTAAAGGTGTATTCACGTAGGAATAAAAGTGGGAAGAAGAAAGAATGA

mRNA sequence

ATGGAATTTTCATTGGGAGAATTTTTGGTGATTCTACAAGGGGACAGAAGCCTCGTAAAATCACAGGGAGCGGAAGAGTCAAAGAATAATTTAGCGGACTGTCTGAGTAATCTAAAACTCGAAGTTCAAAGAATTCTTTTGTCTTTTGGTAGTGTGTTTGAATCCAGAAATCAGTTGACACCACCTCGCAATCATGATCCAGGGGCCCGGGCGGTGAATGTGCGGCCTTATCCACTGAATCTTGGCACCATACCAGATAAGTATCCAATTCCCGTTGTTGATGAACTACTAGATGAATTATTCGGGGCAACCATATTTTCAAAAATTGATCTAAAGTCAGGCTATCACCAGATTAGAGTGCGAGTCGCCGATGTTCACAAAACGGCGCTTCGTACCCATGAAGGGCACTACGAATTTCTCGTGATGCCATTTGGGTTGAAGAATGCTCCAGCCACTTTTCAATCAGGAATGAATGATATTCTCCGCCCATACTTACGCAAATTTGTTTTGGTTTTCTTCGACGATATCCTAATCTACAACAAGTCACTAGAAGAACATTTGCAGCAATTGGTCGTGGTTTTAGAAACCTTAGTAGTTCATAAACTGGTGGCGAATTTTAAAAAATGTCAATTCGCAGTAGATCGAATTGAATATTTGGGTCACATTATCTCATCTGATGGGGTGGCGGCGGATCCAACGAAAATAATGGCTATGGAATTACAAGGTTTCTTGGGTCTTACAGGTTATTATCGGAAATTTGTGGCAAACTATGGTTCTATTGCACTACCCTTGACACAATTGTTAAAGAAAGGAAAGTTTCAGTGGAATGAGACAGCAAAAAATGCGTTCCAACAATTAAAATTTGCTATGATGTCGGTACCGGTGTTAGGTATTCCAGATTTTCCCAAGGTTTTGTGCTGGAAACTGATGTTTCAGGTGTTGATATTGGGGCTTCAAGCTTTGCCCGATACCCATAGGTTTAAAGCTGTGTATGAACGGGAACTTATGGCAATCGTGCGGGCTGTTCAAAAATGGTGCCCATATCTGTTAGGTAAGCCTTTTGTGGTGCGTACAGATAAAAAAAGTTTGAAGTTTCTTCTTGAACAACGAGCCATTGGGGGAGAATATCAGAGATGGATCACTAAACTATTGGGGTATGATTTTGTGATTGAATACAAGAAAGGAATGGAAAATAAAGCGGCTAATGCTTTATCACGATTACCACCGGTATTTGAATTGGGCCTCATAAGTGTTGTGAGCGGGCTCAATCCTTCGATTTTCATTGATCAAGTGGCTGGGAATGAAGCTCTGAATAGTATTCGGTTATCCTTGATAAATGGACAGCCAACCCCGGAGGGATATTCACTACATAGAGAGGTTCTATGCTATCACGGCCGGTTGGTTCTTTCGGAGGATTCCCCTACTATCCCCTTATTATTAGCGGAGTTTCATAACAGCCCGATAGGGGGACATCATGGCGCGTTGACAACATATCAAAGGCTAGCAAGGGAGGTATATTGGCGAGGTATGAAAGCACACATCCGCACATATGTTGCCGAATGTTCGGTTTGTCAACAAGCCAAATATTTGTCATTAACTCCAGCCGGTCTTCTTCAAGCATTACCCATTCCGGACCGTGTATGGGAGGATATTAGTATGGATTTTATTGAGGGTCTTCCTAAATCTGAGTGCTATGATGTCATATTGGTGGTTGTGGATAGACTTTCCAAGTATGCACATTTCATTCCTTTGAAGCATCCTTTTGGTGCAAAAGTTGTAGCTGCTGTTTTTATGCGGGAAATCATTCATTTGCATGGATGCCCCCGAAGTATAGTGTCGGATCGTGATCATGGTCAAACCGAAGTTGTCAATCGAGGGGTGGAGACGTATCTACGATGTTTTGCTATGAACACACCTAAGCAGTGGGCTAAATGGCTAGCTTGGGCTGAATTGAGCTATAATACAACTGTCCATACAGCCATATTGATGACCCCCTTCGAGGCTCACTATGGTCGACCACCTCCCTCTATATTACCATGCGTGAAGGAGTCGAGCCCGGTGAATGAAGTAGATCATTTGATGAAGGAAAGAGATGGAATTCTGAGAATTTTGAAGGCCAATTTATTGAAGGCACAACAGCGAATGGTCAAATACGCCAAATTGACCGACGGGAGGCCTCTATTTCCAATTCCAAAAGATTTGGCTGCTGATTTGTCGATGCAATTGTCTCCGGTAGAGGTGTTGGGAGTTCGCAAAACCAGAGAAAAGGGGGACAAGTTAGAAGTTTTGATTTTCTGGAGTGACGGTACACCTGAAAGTGCTACATGGGAACAAGCCACTCTTATTCAAGAACAATTTCTTGAATTCCACCTTGAGGACAAGGTGGCTCTTTGGGGGGCGGGCAATGATAGACCCCACATAGTAAAGGTGTATTCACGTAGGAATAAAAGTGGGAAGAAGAAAGAATGA

Coding sequence (CDS)

ATGGAATTTTCATTGGGAGAATTTTTGGTGATTCTACAAGGGGACAGAAGCCTCGTAAAATCACAGGGAGCGGAAGAGTCAAAGAATAATTTAGCGGACTGTCTGAGTAATCTAAAACTCGAAGTTCAAAGAATTCTTTTGTCTTTTGGTAGTGTGTTTGAATCCAGAAATCAGTTGACACCACCTCGCAATCATGATCCAGGGGCCCGGGCGGTGAATGTGCGGCCTTATCCACTGAATCTTGGCACCATACCAGATAAGTATCCAATTCCCGTTGTTGATGAACTACTAGATGAATTATTCGGGGCAACCATATTTTCAAAAATTGATCTAAAGTCAGGCTATCACCAGATTAGAGTGCGAGTCGCCGATGTTCACAAAACGGCGCTTCGTACCCATGAAGGGCACTACGAATTTCTCGTGATGCCATTTGGGTTGAAGAATGCTCCAGCCACTTTTCAATCAGGAATGAATGATATTCTCCGCCCATACTTACGCAAATTTGTTTTGGTTTTCTTCGACGATATCCTAATCTACAACAAGTCACTAGAAGAACATTTGCAGCAATTGGTCGTGGTTTTAGAAACCTTAGTAGTTCATAAACTGGTGGCGAATTTTAAAAAATGTCAATTCGCAGTAGATCGAATTGAATATTTGGGTCACATTATCTCATCTGATGGGGTGGCGGCGGATCCAACGAAAATAATGGCTATGGAATTACAAGGTTTCTTGGGTCTTACAGGTTATTATCGGAAATTTGTGGCAAACTATGGTTCTATTGCACTACCCTTGACACAATTGTTAAAGAAAGGAAAGTTTCAGTGGAATGAGACAGCAAAAAATGCGTTCCAACAATTAAAATTTGCTATGATGTCGGTACCGGTGTTAGGTATTCCAGATTTTCCCAAGGTTTTGTGCTGGAAACTGATGTTTCAGGTGTTGATATTGGGGCTTCAAGCTTTGCCCGATACCCATAGGTTTAAAGCTGTGTATGAACGGGAACTTATGGCAATCGTGCGGGCTGTTCAAAAATGGTGCCCATATCTGTTAGGTAAGCCTTTTGTGGTGCGTACAGATAAAAAAAGTTTGAAGTTTCTTCTTGAACAACGAGCCATTGGGGGAGAATATCAGAGATGGATCACTAAACTATTGGGGTATGATTTTGTGATTGAATACAAGAAAGGAATGGAAAATAAAGCGGCTAATGCTTTATCACGATTACCACCGGTATTTGAATTGGGCCTCATAAGTGTTGTGAGCGGGCTCAATCCTTCGATTTTCATTGATCAAGTGGCTGGGAATGAAGCTCTGAATAGTATTCGGTTATCCTTGATAAATGGACAGCCAACCCCGGAGGGATATTCACTACATAGAGAGGTTCTATGCTATCACGGCCGGTTGGTTCTTTCGGAGGATTCCCCTACTATCCCCTTATTATTAGCGGAGTTTCATAACAGCCCGATAGGGGGACATCATGGCGCGTTGACAACATATCAAAGGCTAGCAAGGGAGGTATATTGGCGAGGTATGAAAGCACACATCCGCACATATGTTGCCGAATGTTCGGTTTGTCAACAAGCCAAATATTTGTCATTAACTCCAGCCGGTCTTCTTCAAGCATTACCCATTCCGGACCGTGTATGGGAGGATATTAGTATGGATTTTATTGAGGGTCTTCCTAAATCTGAGTGCTATGATGTCATATTGGTGGTTGTGGATAGACTTTCCAAGTATGCACATTTCATTCCTTTGAAGCATCCTTTTGGTGCAAAAGTTGTAGCTGCTGTTTTTATGCGGGAAATCATTCATTTGCATGGATGCCCCCGAAGTATAGTGTCGGATCGTGATCATGGTCAAACCGAAGTTGTCAATCGAGGGGTGGAGACGTATCTACGATGTTTTGCTATGAACACACCTAAGCAGTGGGCTAAATGGCTAGCTTGGGCTGAATTGAGCTATAATACAACTGTCCATACAGCCATATTGATGACCCCCTTCGAGGCTCACTATGGTCGACCACCTCCCTCTATATTACCATGCGTGAAGGAGTCGAGCCCGGTGAATGAAGTAGATCATTTGATGAAGGAAAGAGATGGAATTCTGAGAATTTTGAAGGCCAATTTATTGAAGGCACAACAGCGAATGGTCAAATACGCCAAATTGACCGACGGGAGGCCTCTATTTCCAATTCCAAAAGATTTGGCTGCTGATTTGTCGATGCAATTGTCTCCGGTAGAGGTGTTGGGAGTTCGCAAAACCAGAGAAAAGGGGGACAAGTTAGAAGTTTTGATTTTCTGGAGTGACGGTACACCTGAAAGTGCTACATGGGAACAAGCCACTCTTATTCAAGAACAATTTCTTGAATTCCACCTTGAGGACAAGGTGGCTCTTTGGGGGGCGGGCAATGATAGACCCCACATAGTAAAGGTGTATTCACGTAGGAATAAAAGTGGGAAGAAGAAAGAATGA
Homology
[Close]
BLAST of CSPI03G21010 vs. Swiss-Prot
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-86
Identity = 220/718 (30.64%), Postives = 346/718 (48.19%), Query Frame = 1 

Query: 78   PLNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHY 137
            PLN    P+ YP+P++++LL ++ G+TIF+K+DLKS YH IRVR  D HK A R   G +
Sbjct: 470  PLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVF 529

Query: 138  EFLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETL 197
            E+LVMP+G+  APA FQ  +N IL       V+ + DDILI++KS  EH++ +  VL+ L
Sbjct: 530  EYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKL 589

Query: 198  VVHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLT 257
                L+ N  KC+F   +++++G+ IS  G       I  +          EL+ FLG  
Sbjct: 590  KNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSV 649

Query: 258  GYYRKFVANYGSIALPLTQLLKKG-KFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLC 317
             Y RKF+     +  PL  LLKK  +++W  T   A + +K  ++S PVL   DF K + 
Sbjct: 650  NYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKIL 709

Query: 318  WKLMFQVLILG--LQALPDTHRFK----------------AVYERELMAIVRAVQKWCPY 377
             +     + +G  L    D  ++                 +V ++E++AI+++++ W  Y
Sbjct: 710  LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY 769

Query: 378  LLG--KPFVVRTDKKSL--KFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANAL 437
            L    +PF + TD ++L  +   E         RW   L  ++F I Y+ G  N  A+AL
Sbjct: 770  LESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADAL 829

Query: 438  SRL-------PPVFELGLISVVSGLN-PSIFIDQVAGNEALNSIRLSLINGQPTPEGYSL 497
            SR+       P   E   I+ V+ ++    F +QV      ++  L+L+N     E   +
Sbjct: 830  SRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNN----EDKRV 889

Query: 498  HREVLCYHGRLVLSEDSPTIP-------LLLAEFHNSPIGGHHGALTTYQRLAREVYWRG 557
               +    G L+ S+D   +P        ++ ++H      H G       + R   W+G
Sbjct: 890  EENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKG 949

Query: 558  MKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWEDISMDFIEGLPKSECYDVIL 617
            ++  I+ YV  C  CQ  K  +  P G LQ +P  +R WE +SMDFI  LP+S  Y+ + 
Sbjct: 950  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1009

Query: 618  VVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPRSIVSDRDH------------ 677
            VVVDR SK A  +P      A+  A +F + +I   G P+ I++D DH            
Sbjct: 1010 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1069

Query: 678  -----------------GQTEVVNRGVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTA 719
                             GQTE  N+ VE  LRC     P  W   ++  + SYN  +H+A
Sbjct: 1070 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSA 1129

[Close]
BLAST of CSPI03G21010 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-86
Identity = 220/718 (30.64%), Postives = 346/718 (48.19%), Query Frame = 1 

Query: 78   PLNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHY 137
            PLN    P+ YP+P++++LL ++ G+TIF+K+DLKS YH IRVR  D HK A R   G +
Sbjct: 470  PLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVF 529

Query: 138  EFLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETL 197
            E+LVMP+G+  APA FQ  +N IL       V+ + DDILI++KS  EH++ +  VL+ L
Sbjct: 530  EYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKL 589

Query: 198  VVHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLT 257
                L+ N  KC+F   +++++G+ IS  G       I  +          EL+ FLG  
Sbjct: 590  KNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSV 649

Query: 258  GYYRKFVANYGSIALPLTQLLKKG-KFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLC 317
             Y RKF+     +  PL  LLKK  +++W  T   A + +K  ++S PVL   DF K + 
Sbjct: 650  NYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKIL 709

Query: 318  WKLMFQVLILG--LQALPDTHRFK----------------AVYERELMAIVRAVQKWCPY 377
             +     + +G  L    D  ++                 +V ++E++AI+++++ W  Y
Sbjct: 710  LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY 769

Query: 378  LLG--KPFVVRTDKKSL--KFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANAL 437
            L    +PF + TD ++L  +   E         RW   L  ++F I Y+ G  N  A+AL
Sbjct: 770  LESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADAL 829

Query: 438  SRL-------PPVFELGLISVVSGLN-PSIFIDQVAGNEALNSIRLSLINGQPTPEGYSL 497
            SR+       P   E   I+ V+ ++    F +QV      ++  L+L+N     E   +
Sbjct: 830  SRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNN----EDKRV 889

Query: 498  HREVLCYHGRLVLSEDSPTIP-------LLLAEFHNSPIGGHHGALTTYQRLAREVYWRG 557
               +    G L+ S+D   +P        ++ ++H      H G       + R   W+G
Sbjct: 890  EENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKG 949

Query: 558  MKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWEDISMDFIEGLPKSECYDVIL 617
            ++  I+ YV  C  CQ  K  +  P G LQ +P  +R WE +SMDFI  LP+S  Y+ + 
Sbjct: 950  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1009

Query: 618  VVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPRSIVSDRDH------------ 677
            VVVDR SK A  +P      A+  A +F + +I   G P+ I++D DH            
Sbjct: 1010 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1069

Query: 678  -----------------GQTEVVNRGVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTA 719
                             GQTE  N+ VE  LRC     P  W   ++  + SYN  +H+A
Sbjct: 1070 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSA 1129

[Close]
BLAST of CSPI03G21010 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-86
Identity = 220/718 (30.64%), Postives = 346/718 (48.19%), Query Frame = 1 

Query: 78   PLNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHY 137
            PLN    P+ YP+P++++LL ++ G+TIF+K+DLKS YH IRVR  D HK A R   G +
Sbjct: 470  PLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVF 529

Query: 138  EFLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETL 197
            E+LVMP+G+  APA FQ  +N IL       V+ + DDILI++KS  EH++ +  VL+ L
Sbjct: 530  EYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKL 589

Query: 198  VVHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLT 257
                L+ N  KC+F   +++++G+ IS  G       I  +          EL+ FLG  
Sbjct: 590  KNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSV 649

Query: 258  GYYRKFVANYGSIALPLTQLLKKG-KFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLC 317
             Y RKF+     +  PL  LLKK  +++W  T   A + +K  ++S PVL   DF K + 
Sbjct: 650  NYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKIL 709

Query: 318  WKLMFQVLILG--LQALPDTHRFK----------------AVYERELMAIVRAVQKWCPY 377
             +     + +G  L    D  ++                 +V ++E++AI+++++ W  Y
Sbjct: 710  LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY 769

Query: 378  LLG--KPFVVRTDKKSL--KFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANAL 437
            L    +PF + TD ++L  +   E         RW   L  ++F I Y+ G  N  A+AL
Sbjct: 770  LESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADAL 829

Query: 438  SRL-------PPVFELGLISVVSGLN-PSIFIDQVAGNEALNSIRLSLINGQPTPEGYSL 497
            SR+       P   E   I+ V+ ++    F +QV      ++  L+L+N     E   +
Sbjct: 830  SRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNN----EDKRV 889

Query: 498  HREVLCYHGRLVLSEDSPTIP-------LLLAEFHNSPIGGHHGALTTYQRLAREVYWRG 557
               +    G L+ S+D   +P        ++ ++H      H G       + R   W+G
Sbjct: 890  EENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKG 949

Query: 558  MKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWEDISMDFIEGLPKSECYDVIL 617
            ++  I+ YV  C  CQ  K  +  P G LQ +P  +R WE +SMDFI  LP+S  Y+ + 
Sbjct: 950  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1009

Query: 618  VVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPRSIVSDRDH------------ 677
            VVVDR SK A  +P      A+  A +F + +I   G P+ I++D DH            
Sbjct: 1010 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1069

Query: 678  -----------------GQTEVVNRGVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTA 719
                             GQTE  N+ VE  LRC     P  W   ++  + SYN  +H+A
Sbjct: 1070 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSA 1129

[Close]
BLAST of CSPI03G21010 vs. Swiss-Prot
Match: TF24_SCHPO (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-86
Identity = 220/718 (30.64%), Postives = 346/718 (48.19%), Query Frame = 1 

Query: 78   PLNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHY 137
            PLN    P+ YP+P++++LL ++ G+TIF+K+DLKS YH IRVR  D HK A R   G +
Sbjct: 470  PLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVF 529

Query: 138  EFLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETL 197
            E+LVMP+G+  APA FQ  +N IL       V+ + DDILI++KS  EH++ +  VL+ L
Sbjct: 530  EYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKL 589

Query: 198  VVHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLT 257
                L+ N  KC+F   +++++G+ IS  G       I  +          EL+ FLG  
Sbjct: 590  KNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSV 649

Query: 258  GYYRKFVANYGSIALPLTQLLKKG-KFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLC 317
             Y RKF+     +  PL  LLKK  +++W  T   A + +K  ++S PVL   DF K + 
Sbjct: 650  NYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKIL 709

Query: 318  WKLMFQVLILG--LQALPDTHRFK----------------AVYERELMAIVRAVQKWCPY 377
             +     + +G  L    D  ++                 +V ++E++AI+++++ W  Y
Sbjct: 710  LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY 769

Query: 378  LLG--KPFVVRTDKKSL--KFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANAL 437
            L    +PF + TD ++L  +   E         RW   L  ++F I Y+ G  N  A+AL
Sbjct: 770  LESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADAL 829

Query: 438  SRL-------PPVFELGLISVVSGLN-PSIFIDQVAGNEALNSIRLSLINGQPTPEGYSL 497
            SR+       P   E   I+ V+ ++    F +QV      ++  L+L+N     E   +
Sbjct: 830  SRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNN----EDKRV 889

Query: 498  HREVLCYHGRLVLSEDSPTIP-------LLLAEFHNSPIGGHHGALTTYQRLAREVYWRG 557
               +    G L+ S+D   +P        ++ ++H      H G       + R   W+G
Sbjct: 890  EENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKG 949

Query: 558  MKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWEDISMDFIEGLPKSECYDVIL 617
            ++  I+ YV  C  CQ  K  +  P G LQ +P  +R WE +SMDFI  LP+S  Y+ + 
Sbjct: 950  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1009

Query: 618  VVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPRSIVSDRDH------------ 677
            VVVDR SK A  +P      A+  A +F + +I   G P+ I++D DH            
Sbjct: 1010 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1069

Query: 678  -----------------GQTEVVNRGVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTA 719
                             GQTE  N+ VE  LRC     P  W   ++  + SYN  +H+A
Sbjct: 1070 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSA 1129

[Close]
BLAST of CSPI03G21010 vs. Swiss-Prot
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-86
Identity = 220/718 (30.64%), Postives = 346/718 (48.19%), Query Frame = 1 

Query: 78   PLNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHY 137
            PLN    P+ YP+P++++LL ++ G+TIF+K+DLKS YH IRVR  D HK A R   G +
Sbjct: 470  PLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVF 529

Query: 138  EFLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETL 197
            E+LVMP+G+  APA FQ  +N IL       V+ + DDILI++KS  EH++ +  VL+ L
Sbjct: 530  EYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKL 589

Query: 198  VVHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLT 257
                L+ N  KC+F   +++++G+ IS  G       I  +          EL+ FLG  
Sbjct: 590  KNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSV 649

Query: 258  GYYRKFVANYGSIALPLTQLLKKG-KFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLC 317
             Y RKF+     +  PL  LLKK  +++W  T   A + +K  ++S PVL   DF K + 
Sbjct: 650  NYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKIL 709

Query: 318  WKLMFQVLILG--LQALPDTHRFK----------------AVYERELMAIVRAVQKWCPY 377
             +     + +G  L    D  ++                 +V ++E++AI+++++ W  Y
Sbjct: 710  LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY 769

Query: 378  LLG--KPFVVRTDKKSL--KFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANAL 437
            L    +PF + TD ++L  +   E         RW   L  ++F I Y+ G  N  A+AL
Sbjct: 770  LESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADAL 829

Query: 438  SRL-------PPVFELGLISVVSGLN-PSIFIDQVAGNEALNSIRLSLINGQPTPEGYSL 497
            SR+       P   E   I+ V+ ++    F +QV      ++  L+L+N     E   +
Sbjct: 830  SRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNN----EDKRV 889

Query: 498  HREVLCYHGRLVLSEDSPTIP-------LLLAEFHNSPIGGHHGALTTYQRLAREVYWRG 557
               +    G L+ S+D   +P        ++ ++H      H G       + R   W+G
Sbjct: 890  EENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKG 949

Query: 558  MKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWEDISMDFIEGLPKSECYDVIL 617
            ++  I+ YV  C  CQ  K  +  P G LQ +P  +R WE +SMDFI  LP+S  Y+ + 
Sbjct: 950  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1009

Query: 618  VVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPRSIVSDRDH------------ 677
            VVVDR SK A  +P      A+  A +F + +I   G P+ I++D DH            
Sbjct: 1010 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1069

Query: 678  -----------------GQTEVVNRGVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTA 719
                             GQTE  N+ VE  LRC     P  W   ++  + SYN  +H+A
Sbjct: 1070 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSA 1129

[Close]
BLAST of CSPI03G21010 vs. TrEMBL
Match: A0A087GEK8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G499800 PE=4 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 1.4e-205
Identity = 375/689 (54.43%), Postives = 478/689 (69.38%), Query Frame = 1 

Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  TIPD +PIP++D+LLDEL GAT+FSK+DLKSGYHQI V+  +V KTA RTH+GHYE
Sbjct: 675  LNKVTIPDSFPIPMIDQLLDELHGATVFSKLDLKSGYHQILVKPQNVPKTAFRTHDGHYE 734

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAP TFQ+ MN++ R +LRKFVLVFFDDIL+Y+ SL+EH + L VVL+ L 
Sbjct: 735  FLVMPFGLTNAPTTFQALMNEVFRAHLRKFVLVFFDDILVYSSSLQEHQEHLRVVLQILF 794

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
              +L AN KKCQF    IEYLGH+IS +GV+ADP+K+ AM           L+GFLGLTG
Sbjct: 795  QQQLFANKKKCQFGSSSIEYLGHVISGEGVSADPSKLQAMVSWPLPKNIKALRGFLGLTG 854

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYR+FV  YGSIA PLT LLKK KFQW+E A  AF++LK AM +VPVL + DF ++   +
Sbjct: 855  YYRRFVQGYGSIAKPLTSLLKKDKFQWSEEATVAFEKLKVAMSTVPVLALVDFSELFVVE 914

Query: 319  LMFQVLILGL-------------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                 + LG              QAL D  + K+VYERELMAIV A+QKW  YLLG+ F+
Sbjct: 915  SDASGIGLGAVLLQKQKPVAYFSQALTDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFL 974

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGL 438
            VRTD+KSLKFLLEQR +  EYQ+W+TK+LG++F I YK G+ENKAA+ALSR+  + +L  
Sbjct: 975  VRTDQKSLKFLLEQREVNLEYQQWLTKILGFNFDIHYKPGLENKAADALSRVEGLPQLYA 1034

Query: 439  ISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPT 498
            +SV + +      ++V  N     I+  ++    T  GYS+ +  L Y+G+LVL ++S  
Sbjct: 1035 LSVPAAIQLEEINEEVDRNPVSKKIKEEVLLDASTHSGYSVVQGRLLYNGKLVLPKESYL 1094

Query: 499  IPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPA 558
            I +LL EFHNS +GGH G L T + L    YW+GM A I+T+VAEC VCQ+ KY +L P+
Sbjct: 1095 IKVLLHEFHNSRMGGHGGVLKTQRHLGALFYWQGMMADIKTFVAECVVCQKHKYSTLAPS 1154

Query: 559  GLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAA 618
            GLLQ LPIP +VWEDIS+DF+EGLPKSE +D ILVVVDRL+KYAHFI L+HPFGAK +AA
Sbjct: 1155 GLLQPLPIPTQVWEDISLDFVEGLPKSEGFDAILVVVDRLTKYAHFIKLQHPFGAKEIAA 1214

Query: 619  VFMREIIHLHGCPRSIVSDRD-----------------------------HGQTEVVNRG 678
            VF++EI+ LHG P ++VSDRD                              GQTEV NRG
Sbjct: 1215 VFIQEIVRLHGYPSTMVSDRDTLFTGMFWTELFRLAGTSLNFSTAYHPQTDGQTEVTNRG 1274

Query: 679  VETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSP 716
            +ET LRCF  + PK+WA +L WAE  YN++ H+AI MTPF+A YGR PPS+L     S+ 
Sbjct: 1275 LETILRCFTSDKPKKWAAYLPWAEFCYNSSYHSAIQMTPFKALYGRDPPSLLRFEDGSTT 1334

[Close]
BLAST of CSPI03G21010 vs. TrEMBL
Match: A0A087G3S6_ARAAL (Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs46225U000100 PE=4 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 2.1e-201
Identity = 367/693 (52.96%), Postives = 468/693 (67.53%), Query Frame = 1 

Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  TIPD +PIP++D+LLDEL GATIFSK+DLKSGYHQI V+  DV KTA RTH+GHYE
Sbjct: 701  LNKVTIPDSFPIPMIDQLLDELHGATIFSKLDLKSGYHQILVKAEDVAKTAFRTHDGHYE 760

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAPATFQS MND+ R YLRKFVLVFFDDIL+Y+KSL+EH Q L +VLE L 
Sbjct: 761  FLVMPFGLTNAPATFQSLMNDVFRGYLRKFVLVFFDDILVYSKSLQEHQQHLGLVLELLQ 820

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
             H+L AN KKC+F    +EYLGH++S  GVAADP KI AM           L+GFLGLTG
Sbjct: 821  QHQLFANKKKCEFGRTELEYLGHVVSGKGVAADPEKIQAMVSWPEPQNVKALRGFLGLTG 880

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYRKFV  YG IA PLT LLKK +FQW   A  AFQ+LK AM +VPVL + DF +    +
Sbjct: 881  YYRKFVQRYGEIARPLTALLKKDQFQWTAEATVAFQKLKKAMSTVPVLALVDFTEQFVVE 940

Query: 319  LMFQVLILGL-------------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                   LG              QAL +  R K+VYERELMAIV A+QKW  YLLG+ FV
Sbjct: 941  SDASGTGLGAVLMQSQRPLAYFSQALTERQRLKSVYERELMAIVFAIQKWRHYLLGRKFV 1000

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGL 438
            VRTD+KSLKFLLEQR I  EYQ+W+TKLLG+DF I+YK G+ENKAA+ALSR     +L  
Sbjct: 1001 VRTDQKSLKFLLEQREINMEYQKWLTKLLGFDFEIQYKPGLENKAADALSRKDMALQLCA 1060

Query: 439  ISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPT 498
            +S+ + +       +V  +  L  ++  ++    +   +S+ +  L   G+LV+   S  
Sbjct: 1061 LSIPAAIQLEQINTEVDNDPDLRKLKEEVLQDAASHSEFSVVQGRLLRKGKLVVPAQSRL 1120

Query: 499  IPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPA 558
            + ++L EFHN  +GGH G L T +R+    YW+GM + IR +VA C VCQ+ KY +L PA
Sbjct: 1121 VNVILQEFHNGKLGGHGGVLKTQKRVEAIFYWKGMMSRIREFVAACQVCQRHKYSTLAPA 1180

Query: 559  GLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAA 618
            GLLQ LPIPD+VWEDISMDF+EGLPKSE ++V++VVVDRL+KYAHFI +KHP  A  VA 
Sbjct: 1181 GLLQPLPIPDQVWEDISMDFVEGLPKSEGFEVVMVVVDRLTKYAHFISMKHPVTAVEVAL 1240

Query: 619  VFMREIIHLHGCPRSIVSDRD-----------------------------HGQTEVVNRG 678
            +F +E++ LHG P++IVSDRD                              GQTEV NRG
Sbjct: 1241 IFTKEVVKLHGFPKTIVSDRDPLFTGRFWTEMFRLAGTSLCFSTAYHPQSDGQTEVTNRG 1300

Query: 679  VETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSP 720
            +ET LRCF+ + P+ W ++L WAEL YNT+ HTAI M+PF+A YGR PP+++     S+ 
Sbjct: 1301 METLLRCFSSDKPRCWVQFLHWAELCYNTSYHTAIKMSPFQAVYGREPPTLIKFETGSTS 1360

[Close]
BLAST of CSPI03G21010 vs. TrEMBL
Match: A0A087H8D5_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G106900 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 1.3e-198
Identity = 375/741 (50.61%), Postives = 484/741 (65.32%), Query Frame = 1 

Query: 39   KLEVQR---ILLSFGSVFESRNQLTPP----RNHDPGAR-AVNVRPYPLNLGTIPDKYPI 98
            K E+++   ++L+ G + ES +  + P    R  D   R  V+ R   LN  T+ D YPI
Sbjct: 580  KAEIEKQVAVMLAAGIIRESTSPYSSPVLLVRKKDGSWRFCVDYRA--LNKATVGDSYPI 639

Query: 99   PVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYEFLVMPFGLKNAP 158
            P++D+LLDEL GA +FSK+DL+SGYHQIRVR  DV KTA RTH+GHYEFLVMPFGL NAP
Sbjct: 640  PMIDQLLDELHGACVFSKLDLRSGYHQIRVRAEDVPKTAFRTHDGHYEFLVMPFGLTNAP 699

Query: 159  ATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLVVHKLVANFKKCQ 218
            ATFQ+ MND+ R +LRKFVLVFFDDIL+Y+KS  EH   L +VL+ L  H+L AN +KCQ
Sbjct: 700  ATFQALMNDVFRQHLRKFVLVFFDDILVYSKSASEHRNHLQLVLQLLQDHQLYANKRKCQ 759

Query: 219  FAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTGYYRKFVANYGSI 278
            F    IEYLGH+I+++GV+AD +KI AM           L+GFLGLTGYYRKFV  YGSI
Sbjct: 760  FGSRSIEYLGHVITAEGVSADASKIQAMVDWPEPRNVKALRGFLGLTGYYRKFVRGYGSI 819

Query: 279  ALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWKLMFQVLILGL-- 338
            A PLT LL+K +F+W+  A  AF  LK AM++VPVL + DF      +       LG   
Sbjct: 820  AKPLTSLLQKDQFRWSPEASTAFNNLKQAMVTVPVLTMADFDAQFVVESDASGTGLGAVL 879

Query: 339  -----------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFVVRTDKKSLKFLL 398
                       QAL D  + K+VYERELMAIV A+QKW  YLLG+ FVVRTD+KSLKFLL
Sbjct: 880  MQHQKPLAYFSQALTDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQKSLKFLL 939

Query: 399  EQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGLISVVSGLNPSIF 458
            EQR I  EYQ+W+TK+LG+DF I+YK G+ENKAA+ALSR   + +L  +S+ + +     
Sbjct: 940  EQRQINMEYQKWLTKILGFDFNIQYKSGLENKAADALSRRDAIPQLFALSIPAAIQLEDI 999

Query: 459  IDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPTIPLLLAEFHNSP 518
              +V  +  L  I+  ++    +  G+++ +  L   G+LV+   S  + L+L EFH S 
Sbjct: 1000 SSEVDKDLKLQKIKAEVLADPKSHAGFTVVQGRLLRQGKLVVPAQSHLVELILKEFHGSK 1059

Query: 519  IGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRV 578
            IGGH G L T +R+    YW GM   IRTYVAEC VCQ+ KY +L PAGLLQ LPIP +V
Sbjct: 1060 IGGHGGVLKTQKRITAVFYWEGMLNTIRTYVAECQVCQRHKYSTLAPAGLLQPLPIPTQV 1119

Query: 579  WEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGC 638
            W DISMDF EGLPK E +DVI+VVVDRL+KY+HFI L HPFGA  VA VF+ EI+ LHG 
Sbjct: 1120 WADISMDFFEGLPKFEGFDVIMVVVDRLTKYSHFISLAHPFGAPQVAMVFILEIVRLHGF 1179

Query: 639  PRSIVSDRD-----------------------------HGQTEVVNRGVETYLRCFAMNT 698
            P ++VSDRD                              GQTEV NRG+ETYLRCFA + 
Sbjct: 1180 PETLVSDRDTLFTGLFWTELFRLAGTKLCFSTAYHPQSDGQTEVTNRGLETYLRCFASDK 1239

Query: 699  PKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSPVNEVDHLMKERD 720
            PK W ++L WAE SYN++ H++I M+PF+A YGR PP +L     S+    +++ + ERD
Sbjct: 1240 PKSWVRFLPWAEFSYNSSYHSSIKMSPFQALYGREPPVLLKFENGSTVNATLENRLSERD 1299

[Close]
BLAST of CSPI03G21010 vs. TrEMBL
Match: J3SDF5_BETVU (Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 1.1e-197
Identity = 359/694 (51.73%), Postives = 456/694 (65.71%), Query Frame = 1 

Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  T+PDKYPIPV+DELLDEL GAT+FSK+DL++GYHQI VR  D HKTA RTHEGHYE
Sbjct: 750  LNKETVPDKYPIPVIDELLDELHGATVFSKLDLRAGYHQILVRPEDTHKTAFRTHEGHYE 809

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAPATFQS MN++ RP+LR+FVLVF DDILIY++S EEH+  L +VL  L 
Sbjct: 810  FLVMPFGLTNAPATFQSLMNEVFRPFLRRFVLVFLDDILIYSRSDEEHVGHLEMVLGMLA 869

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
             H L  N KKC+F    + YLGH+IS  GVA D  K+ A+          EL+GFLGLTG
Sbjct: 870  QHALFVNKKKCEFGKREVAYLGHVISEGGVAMDTEKVKAVLEWEVPKNLRELRGFLGLTG 929

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYRKFVANY  IA PLT+ LKK  F+W+ TA  AF+QLK AM+S PVL +P+F      +
Sbjct: 930  YYRKFVANYAHIARPLTEQLKKDNFKWSATATEAFKQLKSAMVSAPVLAMPNFQLTFVVE 989

Query: 319  LMFQVLILGLQALPDTH-------------RFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                   +G   + D               + K+VYE+ELMAI  AVQKW  YLLG+ FV
Sbjct: 990  TDASGYGMGAVLMQDNRPIAYYSKLLGTRAQLKSVYEKELMAICFAVQKWKYYLLGRHFV 1049

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSR-LPPVFELG 438
            VRTD++SL+++ +QR IG E+Q+W++KL+GYDF I YK G+ N+ A+ALSR      ELG
Sbjct: 1050 VRTDQQSLRYITQQREIGAEFQKWVSKLMGYDFEIHYKPGLSNRVADALSRKTVGEVELG 1109

Query: 439  LISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSP 498
             I  V G+  +    ++ G+  L  +R  L  G+ TP  ++L    L + GR V+   S 
Sbjct: 1110 AIVAVQGVEWAELRREITGDSFLTQVRKELQEGR-TPSHFTLVDGNLLFKGRYVIPSSST 1169

Query: 499  TIPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTP 558
             IP LL E+H++P+GGH G L TY RLA E YWRGM+  +  YV +C +CQQ K     P
Sbjct: 1170 IIPKLLYEYHDAPMGGHAGELKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQKVSQQHP 1229

Query: 559  AGLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVA 618
             GLLQ LPIP  VWEDISMDFIEGLP S+  D ILV+VDRLSKYAHF+ L+HPF A +VA
Sbjct: 1230 RGLLQPLPIPSLVWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFTALMVA 1289

Query: 619  AVFMREIIHLHGCPRSIVSDRDH-----------------------------GQTEVVNR 678
             +F++E++ LHG P SIVSDRD                              GQTE+VNR
Sbjct: 1290 DLFVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVNR 1349

Query: 679  GVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESS 720
             +ETYLRCF    P+ WAKWL WAE SYNT+ HT+  M+PF+  YGR PP ++   K  +
Sbjct: 1350 ALETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQT 1409

[Close]
BLAST of CSPI03G21010 vs. TrEMBL
Match: A0A087HNF3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G155400 PE=4 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 9.4e-194
Identity = 369/735 (50.20%), Postives = 480/735 (65.31%), Query Frame = 1 

Query: 39   KLEVQR---ILLSFGSVFESRNQLTPPR---NHDPGARAVNVRPYPLNLGTIPDKYPIPV 98
            K E++R    +L  G V +SR+  + P        G+    V    LN  T+ D YPIP+
Sbjct: 592  KEEIERQVASMLGAGIVRDSRSPFSSPVLLVKKKDGSWRFCVDYRALNKATVSDSYPIPM 651

Query: 99   VDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYEFLVMPFGLKNAPAT 158
            +D+LLDEL GA IFSK+DL+SGYHQI V+  DV KTA RTH+GHYEFLVMPFGLKNAPAT
Sbjct: 652  IDQLLDELHGANIFSKLDLRSGYHQILVKAEDVAKTAFRTHDGHYEFLVMPFGLKNAPAT 711

Query: 159  FQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLVVHKLVANFKKCQFA 218
            FQ+ MND+ RP+LR+FVLVFFDDIL+Y+ +LEEH + L +VL+ L  +KL AN KKCQF 
Sbjct: 712  FQALMNDLFRPHLRRFVLVFFDDILVYSSNLEEHKEHLTMVLQILQNNKLFANPKKCQFG 771

Query: 219  VDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTGYYRKFVANYGSIAL 278
               IEYLGHIIS  GV+AD  KI AM           L+GFLGLTGYYRKFV+ YG  A 
Sbjct: 772  SSEIEYLGHIISGQGVSADQEKIKAMIEWPEPRNVKALRGFLGLTGYYRKFVSRYGEKAK 831

Query: 279  PLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWKLMFQVLILGL---- 338
            PLT LLKK +F+W + A  AF  LK AM SV VL + DF ++   +       LG     
Sbjct: 832  PLTTLLKKDQFKWGKEAAVAFTTLKEAMTSVSVLALADFNELFVVESDASGTGLGAVLMQ 891

Query: 339  ---------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFVVRTDKKSLKFLLEQ 398
                     QAL +  R K+VYERELMAIV A+QKW  YLLG+ F+VRTD+KSLKFL EQ
Sbjct: 892  KQKPLAFFSQALTERQRMKSVYERELMAIVFAIQKWRHYLLGRRFLVRTDQKSLKFLFEQ 951

Query: 399  RAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGLISVVSGLNPSIFID 458
            R I  EYQ+W+TK+LG++F I+YK G+EN+AA+ALSR   V  L  +S+ + L  +    
Sbjct: 952  REINLEYQKWLTKILGFNFEIQYKPGLENRAADALSRKEAVPLLFALSIPAVLQLNEIES 1011

Query: 459  QVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPTIPLLLAEFHNSPIG 518
             V  +  L  I+   +    +   Y++ +  L + GRLV+   S  I ++L EFH+  +G
Sbjct: 1012 AVDQDPVLKKIKDDWLQDPSSQPDYTVVQGRLLWKGRLVIPTGSAWIEVILKEFHDGKVG 1071

Query: 519  GHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWE 578
            GH G L T +R++   +W+GM   IR YVA C VCQ+ KY +L PAGLLQ LPIP+ VWE
Sbjct: 1072 GHGGVLKTQRRISALFFWKGMLGKIREYVAACHVCQRHKYSTLAPAGLLQPLPIPEAVWE 1131

Query: 579  DISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPR 638
            DISMDFIEGLPKS   ++I+VVVDRL+KY HF+ LKHP  A  VA+VF++EI+ LHG P+
Sbjct: 1132 DISMDFIEGLPKSAGMELIMVVVDRLTKYGHFVGLKHPLDATTVASVFIQEIVRLHGFPK 1191

Query: 639  SIVSDRDH-----------------------------GQTEVVNRGVETYLRCFAMNTPK 698
            ++VSDRD                              GQ+EV NRG+ETY RCF  + P+
Sbjct: 1192 TLVSDRDRLFTGKFWGEMFKLVGTKLCFSTAYHPQSDGQSEVTNRGLETYPRCFTSDKPQ 1251

Query: 699  QWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSPVNEVDHLMKERDGI 716
             WA++L WAELSYNT+ H++I MTPF+A YGR PP++      S+ V +++  ++ERD +
Sbjct: 1252 TWAQFLPWAELSYNTSYHSSIHMTPFQAVYGREPPALRRYENGSTHVADLETKLQERDSM 1311

[Close]
BLAST of CSPI03G21010 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 1.0e-26
Identity = 64/126 (50.79%), Postives = 81/126 (64.29%), Query Frame = 1 

Query: 187 LQQLVVVLETLVVHKLVANFKKCQFAVDRIEYLGH--IISSDGVAADPTKIMAM------ 246
           +  L +VL+    H+  AN KKC F   +I YLGH  IIS +GV+ADP K+ AM      
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 247 ----ELQGFLGLTGYYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVP 301
               EL+GFLGLTGYYR+FV NYG I  PLT+LLKK   +W E A  AF+ LK A+ ++P
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLP 120

[Close]
BLAST of CSPI03G21010 vs. NCBI nr
Match: gi|674235545|gb|KFK28310.1| (hypothetical protein AALP_AA8G499800 [Arabis alpina])

HSP 1 Score: 724.5 bits (1869), Expect = 2.0e-205
Identity = 375/689 (54.43%), Postives = 478/689 (69.38%), Query Frame = 1 

Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  TIPD +PIP++D+LLDEL GAT+FSK+DLKSGYHQI V+  +V KTA RTH+GHYE
Sbjct: 675  LNKVTIPDSFPIPMIDQLLDELHGATVFSKLDLKSGYHQILVKPQNVPKTAFRTHDGHYE 734

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAP TFQ+ MN++ R +LRKFVLVFFDDIL+Y+ SL+EH + L VVL+ L 
Sbjct: 735  FLVMPFGLTNAPTTFQALMNEVFRAHLRKFVLVFFDDILVYSSSLQEHQEHLRVVLQILF 794

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
              +L AN KKCQF    IEYLGH+IS +GV+ADP+K+ AM           L+GFLGLTG
Sbjct: 795  QQQLFANKKKCQFGSSSIEYLGHVISGEGVSADPSKLQAMVSWPLPKNIKALRGFLGLTG 854

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYR+FV  YGSIA PLT LLKK KFQW+E A  AF++LK AM +VPVL + DF ++   +
Sbjct: 855  YYRRFVQGYGSIAKPLTSLLKKDKFQWSEEATVAFEKLKVAMSTVPVLALVDFSELFVVE 914

Query: 319  LMFQVLILGL-------------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                 + LG              QAL D  + K+VYERELMAIV A+QKW  YLLG+ F+
Sbjct: 915  SDASGIGLGAVLLQKQKPVAYFSQALTDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFL 974

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGL 438
            VRTD+KSLKFLLEQR +  EYQ+W+TK+LG++F I YK G+ENKAA+ALSR+  + +L  
Sbjct: 975  VRTDQKSLKFLLEQREVNLEYQQWLTKILGFNFDIHYKPGLENKAADALSRVEGLPQLYA 1034

Query: 439  ISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPT 498
            +SV + +      ++V  N     I+  ++    T  GYS+ +  L Y+G+LVL ++S  
Sbjct: 1035 LSVPAAIQLEEINEEVDRNPVSKKIKEEVLLDASTHSGYSVVQGRLLYNGKLVLPKESYL 1094

Query: 499  IPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPA 558
            I +LL EFHNS +GGH G L T + L    YW+GM A I+T+VAEC VCQ+ KY +L P+
Sbjct: 1095 IKVLLHEFHNSRMGGHGGVLKTQRHLGALFYWQGMMADIKTFVAECVVCQKHKYSTLAPS 1154

Query: 559  GLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAA 618
            GLLQ LPIP +VWEDIS+DF+EGLPKSE +D ILVVVDRL+KYAHFI L+HPFGAK +AA
Sbjct: 1155 GLLQPLPIPTQVWEDISLDFVEGLPKSEGFDAILVVVDRLTKYAHFIKLQHPFGAKEIAA 1214

Query: 619  VFMREIIHLHGCPRSIVSDRD-----------------------------HGQTEVVNRG 678
            VF++EI+ LHG P ++VSDRD                              GQTEV NRG
Sbjct: 1215 VFIQEIVRLHGYPSTMVSDRDTLFTGMFWTELFRLAGTSLNFSTAYHPQTDGQTEVTNRG 1274

Query: 679  VETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSP 716
            +ET LRCF  + PK+WA +L WAE  YN++ H+AI MTPF+A YGR PPS+L     S+ 
Sbjct: 1275 LETILRCFTSDKPKKWAAYLPWAEFCYNSSYHSAIQMTPFKALYGRDPPSLLRFEDGSTT 1334

[Close]
BLAST of CSPI03G21010 vs. NCBI nr
Match: gi|674230743|gb|KFK24528.1| (hypothetical protein AALP_AAs46225U000100, partial [Arabis alpina])

HSP 1 Score: 710.7 bits (1833), Expect = 3.0e-201
Identity = 367/693 (52.96%), Postives = 468/693 (67.53%), Query Frame = 1 

Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  TIPD +PIP++D+LLDEL GATIFSK+DLKSGYHQI V+  DV KTA RTH+GHYE
Sbjct: 701  LNKVTIPDSFPIPMIDQLLDELHGATIFSKLDLKSGYHQILVKAEDVAKTAFRTHDGHYE 760

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAPATFQS MND+ R YLRKFVLVFFDDIL+Y+KSL+EH Q L +VLE L 
Sbjct: 761  FLVMPFGLTNAPATFQSLMNDVFRGYLRKFVLVFFDDILVYSKSLQEHQQHLGLVLELLQ 820

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
             H+L AN KKC+F    +EYLGH++S  GVAADP KI AM           L+GFLGLTG
Sbjct: 821  QHQLFANKKKCEFGRTELEYLGHVVSGKGVAADPEKIQAMVSWPEPQNVKALRGFLGLTG 880

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYRKFV  YG IA PLT LLKK +FQW   A  AFQ+LK AM +VPVL + DF +    +
Sbjct: 881  YYRKFVQRYGEIARPLTALLKKDQFQWTAEATVAFQKLKKAMSTVPVLALVDFTEQFVVE 940

Query: 319  LMFQVLILGL-------------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                   LG              QAL +  R K+VYERELMAIV A+QKW  YLLG+ FV
Sbjct: 941  SDASGTGLGAVLMQSQRPLAYFSQALTERQRLKSVYERELMAIVFAIQKWRHYLLGRKFV 1000

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGL 438
            VRTD+KSLKFLLEQR I  EYQ+W+TKLLG+DF I+YK G+ENKAA+ALSR     +L  
Sbjct: 1001 VRTDQKSLKFLLEQREINMEYQKWLTKLLGFDFEIQYKPGLENKAADALSRKDMALQLCA 1060

Query: 439  ISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPT 498
            +S+ + +       +V  +  L  ++  ++    +   +S+ +  L   G+LV+   S  
Sbjct: 1061 LSIPAAIQLEQINTEVDNDPDLRKLKEEVLQDAASHSEFSVVQGRLLRKGKLVVPAQSRL 1120

Query: 499  IPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPA 558
            + ++L EFHN  +GGH G L T +R+    YW+GM + IR +VA C VCQ+ KY +L PA
Sbjct: 1121 VNVILQEFHNGKLGGHGGVLKTQKRVEAIFYWKGMMSRIREFVAACQVCQRHKYSTLAPA 1180

Query: 559  GLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAA 618
            GLLQ LPIPD+VWEDISMDF+EGLPKSE ++V++VVVDRL+KYAHFI +KHP  A  VA 
Sbjct: 1181 GLLQPLPIPDQVWEDISMDFVEGLPKSEGFEVVMVVVDRLTKYAHFISMKHPVTAVEVAL 1240

Query: 619  VFMREIIHLHGCPRSIVSDRD-----------------------------HGQTEVVNRG 678
            +F +E++ LHG P++IVSDRD                              GQTEV NRG
Sbjct: 1241 IFTKEVVKLHGFPKTIVSDRDPLFTGRFWTEMFRLAGTSLCFSTAYHPQSDGQTEVTNRG 1300

Query: 679  VETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSP 720
            +ET LRCF+ + P+ W ++L WAEL YNT+ HTAI M+PF+A YGR PP+++     S+ 
Sbjct: 1301 METLLRCFSSDKPRCWVQFLHWAELCYNTSYHTAIKMSPFQAVYGREPPTLIKFETGSTS 1360

[Close]
BLAST of CSPI03G21010 vs. NCBI nr
Match: gi|674245622|gb|KFK38387.1| (hypothetical protein AALP_AA3G106900 [Arabis alpina])

HSP 1 Score: 701.4 bits (1809), Expect = 1.8e-198
Identity = 375/741 (50.61%), Postives = 484/741 (65.32%), Query Frame = 1 

Query: 39   KLEVQR---ILLSFGSVFESRNQLTPP----RNHDPGAR-AVNVRPYPLNLGTIPDKYPI 98
            K E+++   ++L+ G + ES +  + P    R  D   R  V+ R   LN  T+ D YPI
Sbjct: 580  KAEIEKQVAVMLAAGIIRESTSPYSSPVLLVRKKDGSWRFCVDYRA--LNKATVGDSYPI 639

Query: 99   PVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYEFLVMPFGLKNAP 158
            P++D+LLDEL GA +FSK+DL+SGYHQIRVR  DV KTA RTH+GHYEFLVMPFGL NAP
Sbjct: 640  PMIDQLLDELHGACVFSKLDLRSGYHQIRVRAEDVPKTAFRTHDGHYEFLVMPFGLTNAP 699

Query: 159  ATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLVVHKLVANFKKCQ 218
            ATFQ+ MND+ R +LRKFVLVFFDDIL+Y+KS  EH   L +VL+ L  H+L AN +KCQ
Sbjct: 700  ATFQALMNDVFRQHLRKFVLVFFDDILVYSKSASEHRNHLQLVLQLLQDHQLYANKRKCQ 759

Query: 219  FAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTGYYRKFVANYGSI 278
            F    IEYLGH+I+++GV+AD +KI AM           L+GFLGLTGYYRKFV  YGSI
Sbjct: 760  FGSRSIEYLGHVITAEGVSADASKIQAMVDWPEPRNVKALRGFLGLTGYYRKFVRGYGSI 819

Query: 279  ALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWKLMFQVLILGL-- 338
            A PLT LL+K +F+W+  A  AF  LK AM++VPVL + DF      +       LG   
Sbjct: 820  AKPLTSLLQKDQFRWSPEASTAFNNLKQAMVTVPVLTMADFDAQFVVESDASGTGLGAVL 879

Query: 339  -----------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFVVRTDKKSLKFLL 398
                       QAL D  + K+VYERELMAIV A+QKW  YLLG+ FVVRTD+KSLKFLL
Sbjct: 880  MQHQKPLAYFSQALTDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQKSLKFLL 939

Query: 399  EQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGLISVVSGLNPSIF 458
            EQR I  EYQ+W+TK+LG+DF I+YK G+ENKAA+ALSR   + +L  +S+ + +     
Sbjct: 940  EQRQINMEYQKWLTKILGFDFNIQYKSGLENKAADALSRRDAIPQLFALSIPAAIQLEDI 999

Query: 459  IDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPTIPLLLAEFHNSP 518
              +V  +  L  I+  ++    +  G+++ +  L   G+LV+   S  + L+L EFH S 
Sbjct: 1000 SSEVDKDLKLQKIKAEVLADPKSHAGFTVVQGRLLRQGKLVVPAQSHLVELILKEFHGSK 1059

Query: 519  IGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRV 578
            IGGH G L T +R+    YW GM   IRTYVAEC VCQ+ KY +L PAGLLQ LPIP +V
Sbjct: 1060 IGGHGGVLKTQKRITAVFYWEGMLNTIRTYVAECQVCQRHKYSTLAPAGLLQPLPIPTQV 1119

Query: 579  WEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGC 638
            W DISMDF EGLPK E +DVI+VVVDRL+KY+HFI L HPFGA  VA VF+ EI+ LHG 
Sbjct: 1120 WADISMDFFEGLPKFEGFDVIMVVVDRLTKYSHFISLAHPFGAPQVAMVFILEIVRLHGF 1179

Query: 639  PRSIVSDRD-----------------------------HGQTEVVNRGVETYLRCFAMNT 698
            P ++VSDRD                              GQTEV NRG+ETYLRCFA + 
Sbjct: 1180 PETLVSDRDTLFTGLFWTELFRLAGTKLCFSTAYHPQSDGQTEVTNRGLETYLRCFASDK 1239

Query: 699  PKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSPVNEVDHLMKERD 720
            PK W ++L WAE SYN++ H++I M+PF+A YGR PP +L     S+    +++ + ERD
Sbjct: 1240 PKSWVRFLPWAEFSYNSSYHSSIKMSPFQALYGREPPVLLKFENGSTVNATLENRLSERD 1299

[Close]
BLAST of CSPI03G21010 vs. NCBI nr
Match: gi|387965727|gb|AFK13856.1| (Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 698.4 bits (1801), Expect = 1.5e-197
Identity = 359/694 (51.73%), Postives = 456/694 (65.71%), Query Frame = 1 

Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  T+PDKYPIPV+DELLDEL GAT+FSK+DL++GYHQI VR  D HKTA RTHEGHYE
Sbjct: 750  LNKETVPDKYPIPVIDELLDELHGATVFSKLDLRAGYHQILVRPEDTHKTAFRTHEGHYE 809

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAPATFQS MN++ RP+LR+FVLVF DDILIY++S EEH+  L +VL  L 
Sbjct: 810  FLVMPFGLTNAPATFQSLMNEVFRPFLRRFVLVFLDDILIYSRSDEEHVGHLEMVLGMLA 869

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
             H L  N KKC+F    + YLGH+IS  GVA D  K+ A+          EL+GFLGLTG
Sbjct: 870  QHALFVNKKKCEFGKREVAYLGHVISEGGVAMDTEKVKAVLEWEVPKNLRELRGFLGLTG 929

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYRKFVANY  IA PLT+ LKK  F+W+ TA  AF+QLK AM+S PVL +P+F      +
Sbjct: 930  YYRKFVANYAHIARPLTEQLKKDNFKWSATATEAFKQLKSAMVSAPVLAMPNFQLTFVVE 989

Query: 319  LMFQVLILGLQALPDTH-------------RFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                   +G   + D               + K+VYE+ELMAI  AVQKW  YLLG+ FV
Sbjct: 990  TDASGYGMGAVLMQDNRPIAYYSKLLGTRAQLKSVYEKELMAICFAVQKWKYYLLGRHFV 1049

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSR-LPPVFELG 438
            VRTD++SL+++ +QR IG E+Q+W++KL+GYDF I YK G+ N+ A+ALSR      ELG
Sbjct: 1050 VRTDQQSLRYITQQREIGAEFQKWVSKLMGYDFEIHYKPGLSNRVADALSRKTVGEVELG 1109

Query: 439  LISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSP 498
             I  V G+  +    ++ G+  L  +R  L  G+ TP  ++L    L + GR V+   S 
Sbjct: 1110 AIVAVQGVEWAELRREITGDSFLTQVRKELQEGR-TPSHFTLVDGNLLFKGRYVIPSSST 1169

Query: 499  TIPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTP 558
             IP LL E+H++P+GGH G L TY RLA E YWRGM+  +  YV +C +CQQ K     P
Sbjct: 1170 IIPKLLYEYHDAPMGGHAGELKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQKVSQQHP 1229

Query: 559  AGLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVA 618
             GLLQ LPIP  VWEDISMDFIEGLP S+  D ILV+VDRLSKYAHF+ L+HPF A +VA
Sbjct: 1230 RGLLQPLPIPSLVWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFTALMVA 1289

Query: 619  AVFMREIIHLHGCPRSIVSDRDH-----------------------------GQTEVVNR 678
             +F++E++ LHG P SIVSDRD                              GQTE+VNR
Sbjct: 1290 DLFVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVNR 1349

Query: 679  GVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESS 720
             +ETYLRCF    P+ WAKWL WAE SYNT+ HT+  M+PF+  YGR PP ++   K  +
Sbjct: 1350 ALETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQT 1409

[Close]
BLAST of CSPI03G21010 vs. NCBI nr
Match: gi|674250890|gb|KFK43655.1| (hypothetical protein AALP_AA1G155400 [Arabis alpina])

HSP 1 Score: 685.3 bits (1767), Expect = 1.4e-193
Identity = 369/735 (50.20%), Postives = 480/735 (65.31%), Query Frame = 1 

Query: 39   KLEVQR---ILLSFGSVFESRNQLTPPR---NHDPGARAVNVRPYPLNLGTIPDKYPIPV 98
            K E++R    +L  G V +SR+  + P        G+    V    LN  T+ D YPIP+
Sbjct: 592  KEEIERQVASMLGAGIVRDSRSPFSSPVLLVKKKDGSWRFCVDYRALNKATVSDSYPIPM 651

Query: 99   VDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYEFLVMPFGLKNAPAT 158
            +D+LLDEL GA IFSK+DL+SGYHQI V+  DV KTA RTH+GHYEFLVMPFGLKNAPAT
Sbjct: 652  IDQLLDELHGANIFSKLDLRSGYHQILVKAEDVAKTAFRTHDGHYEFLVMPFGLKNAPAT 711

Query: 159  FQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLVVHKLVANFKKCQFA 218
            FQ+ MND+ RP+LR+FVLVFFDDIL+Y+ +LEEH + L +VL+ L  +KL AN KKCQF 
Sbjct: 712  FQALMNDLFRPHLRRFVLVFFDDILVYSSNLEEHKEHLTMVLQILQNNKLFANPKKCQFG 771

Query: 219  VDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTGYYRKFVANYGSIAL 278
               IEYLGHIIS  GV+AD  KI AM           L+GFLGLTGYYRKFV+ YG  A 
Sbjct: 772  SSEIEYLGHIISGQGVSADQEKIKAMIEWPEPRNVKALRGFLGLTGYYRKFVSRYGEKAK 831

Query: 279  PLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWKLMFQVLILGL---- 338
            PLT LLKK +F+W + A  AF  LK AM SV VL + DF ++   +       LG     
Sbjct: 832  PLTTLLKKDQFKWGKEAAVAFTTLKEAMTSVSVLALADFNELFVVESDASGTGLGAVLMQ 891

Query: 339  ---------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFVVRTDKKSLKFLLEQ 398
                     QAL +  R K+VYERELMAIV A+QKW  YLLG+ F+VRTD+KSLKFL EQ
Sbjct: 892  KQKPLAFFSQALTERQRMKSVYERELMAIVFAIQKWRHYLLGRRFLVRTDQKSLKFLFEQ 951

Query: 399  RAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGLISVVSGLNPSIFID 458
            R I  EYQ+W+TK+LG++F I+YK G+EN+AA+ALSR   V  L  +S+ + L  +    
Sbjct: 952  REINLEYQKWLTKILGFNFEIQYKPGLENRAADALSRKEAVPLLFALSIPAVLQLNEIES 1011

Query: 459  QVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPTIPLLLAEFHNSPIG 518
             V  +  L  I+   +    +   Y++ +  L + GRLV+   S  I ++L EFH+  +G
Sbjct: 1012 AVDQDPVLKKIKDDWLQDPSSQPDYTVVQGRLLWKGRLVIPTGSAWIEVILKEFHDGKVG 1071

Query: 519  GHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWE 578
            GH G L T +R++   +W+GM   IR YVA C VCQ+ KY +L PAGLLQ LPIP+ VWE
Sbjct: 1072 GHGGVLKTQRRISALFFWKGMLGKIREYVAACHVCQRHKYSTLAPAGLLQPLPIPEAVWE 1131

Query: 579  DISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPR 638
            DISMDFIEGLPKS   ++I+VVVDRL+KY HF+ LKHP  A  VA+VF++EI+ LHG P+
Sbjct: 1132 DISMDFIEGLPKSAGMELIMVVVDRLTKYGHFVGLKHPLDATTVASVFIQEIVRLHGFPK 1191

Query: 639  SIVSDRDH-----------------------------GQTEVVNRGVETYLRCFAMNTPK 698
            ++VSDRD                              GQ+EV NRG+ETY RCF  + P+
Sbjct: 1192 TLVSDRDRLFTGKFWGEMFKLVGTKLCFSTAYHPQSDGQSEVTNRGLETYPRCFTSDKPQ 1251

Query: 699  QWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSPVNEVDHLMKERDGI 716
             WA++L WAELSYNT+ H++I MTPF+A YGR PP++      S+ V +++  ++ERD +
Sbjct: 1252 TWAQFLPWAELSYNTSYHSSIHMTPFQAVYGREPPALRRYENGSTHVADLETKLQERDSM 1311

The following BLAST results are available for this feature:
BLAST of CSPI03G21010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TF22_SCHPO2.5e-8630.64Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF212_SCHPO2.5e-8630.64Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
TF23_SCHPO2.5e-8630.64Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF24_SCHPO2.5e-8630.64Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF25_SCHPO2.5e-8630.64Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of CSPI03G21010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A087GEK8_ARAAL1.4e-20554.43Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G499800 PE=4 SV=1[more]
A0A087G3S6_ARAAL2.1e-20152.96Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs46225U000100 PE=4... [more]
A0A087H8D5_ARAAL1.3e-19850.61Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G106900 PE=4 SV=1[more]
J3SDF5_BETVU1.1e-19751.73Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1[more]
A0A087HNF3_ARAAL9.4e-19450.20Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G155400 PE=4 SV=1[more]
BLAST of CSPI03G21010 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG00860.11.0e-2650.79ATMG00860.1 DNA/RNA polymerases superfamily protein[more]
BLAST of CSPI03G21010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|674235545|gb|KFK28310.1|2.0e-20554.43hypothetical protein AALP_AA8G499800 [Arabis alpina][more]
gi|674230743|gb|KFK24528.1|3.0e-20152.96hypothetical protein AALP_AAs46225U000100, partial [Arabis alpina][more]
gi|674245622|gb|KFK38387.1|1.8e-19850.61hypothetical protein AALP_AA3G106900 [Arabis alpina][more]
gi|387965727|gb|AFK13856.1|1.5e-19751.73Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris][more]
gi|674250890|gb|KFK43655.1|1.4e-19350.20hypothetical protein AALP_AA1G155400 [Arabis alpina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0044238 primary metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G21010.1CSPI03G21010.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 97..223
score: 1.3
IPR000477Reverse transcriptase domainPROFILEPS50878RT_POLcoord: 1..223
score: 11
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 538..632
score:
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 551..674
score: 1.6
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 541..670
score: 2.09
NoneNo IPR availableGENE3DG3DSA:3.10.10.10coord: 79..143
score: 7.3
NoneNo IPR availableGENE3DG3DSA:3.30.70.270coord: 144..226
score: 2.3
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 79..786
score: 7.8E
NoneNo IPR availablePANTHERPTHR24559:SF186SUBFAMILY NOT NAMEDcoord: 79..786
score: 7.8E
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 65..393
score: 2.78E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G21010Melon (DHL92) v3.6.1cpimedB240
CSPI03G21010Cucumber (Gy14) v2cgybcpiB110
CSPI03G21010Silver-seed gourdcarcpiB0519
CSPI03G21010Silver-seed gourdcarcpiB0520
CSPI03G21010Silver-seed gourdcarcpiB0798
CSPI03G21010Cucumber (Chinese Long) v3cpicucB144
CSPI03G21010Watermelon (97103) v2cpiwmbB213
CSPI03G21010Watermelon (97103) v2cpiwmbB224
CSPI03G21010Wax gourdcpiwgoB271
CSPI03G21010Wax gourdcpiwgoB303
CSPI03G21010Cucurbita maxima (Rimu)cmacpiB244
CSPI03G21010Cucurbita maxima (Rimu)cmacpiB458
CSPI03G21010Cucurbita moschata (Rifu)cmocpiB232
CSPI03G21010Cucurbita moschata (Rifu)cmocpiB446
CSPI03G21010Cucumber (Chinese Long) v2cpicuB120
CSPI03G21010Melon (DHL92) v3.5.1cpimeB243
CSPI03G21010Watermelon (Charleston Gray)cpiwcgB230
CSPI03G21010Watermelon (97103) v1cpiwmB236
CSPI03G21010Cucurbita pepo (Zucchini)cpecpiB602
CSPI03G21010Bottle gourd (USVL1VR-Ls)cpilsiB203
CSPI03G21010Bottle gourd (USVL1VR-Ls)cpilsiB210