CSPI03G20140 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATTGCGAATGAAAGTCAGTCAAGCAGTTCACGTTCTAAATCATGATACCCAATCTTGCAACCGCGTGGCAGCAAATCAATGGTTAGTTCAGTTTCAACAGACAGGTGCTGCTTGGGAAGTTGCTACTGCTATCCTTACCTCCGATCATGTTCAGCCTTCAATGTCCTCCTTTGTCCCTGATTTGGAAGTCGAGTTCTTTGCAGCTCAGATTCTTAAACGCAAGGTTAGTAGTTTGACTTTAATTTTAATTCCAGCCCAATTTTGCATTGTTGAAACATCTTTTTTTCCTTATTTTGTGCCAGCCTATTGTTTTGCTTAAGCACAATAACTTCGACACTGGATTTAATTTTGCAACCAGGAAGAATCTAACCTACAAAATTCCATTTTAAAAAAAATAAAAAATAAAATTGTATCAATTTATCTATCTTTTTTCTATTTTAACAAGTAAAGGGATCTTTCATTCAGAGCAGTTTGATAAGCCATCATCTTTATTGGGTCTTTCAGTAGCGTCGTTCCTTTCCACGTTGGAGTCTTACCCTTCTTCTTCTTTGGGTTTTCGTAGCCTGTTTGGTCAGTAGGGAGACAGTGGATGTCTTGACTCTTATCTTTGTGTGGATGTTTGCCTTTGGGGTTCTTGTTAGTCCAAAGGGTTTTCTTCTTCCTTAGCTTGTTCATTTTTCTCCTAGCTAGCAGTTTTGTTTTTTCCTTAGTATGGAAGATGGAAACTTCGAACTTCCAAGAAGGTAAGTTATTTGTGTGGCAGGTTTTGCAAGAAAGAGTTAACACCTTGGGTAGGCTCTTGGCTAGGGACCCTGTTTGGTTAGGCCACATTGTTGTATACTTTGCATGCAGATAGTGGAGGACCTTGAAGAAAAAATGCCTTCTCTGCACATCTAAAGAGGCAAATCGAGCCAAACAAAGAAGAAGGAAAGAGAGCAAAAAACCCTTCTCCATTTTTGAGGGCTGTGCTAAGCAAGCTCTTTCACATCCAACTGTGGTTTACACCCAAGCACTTTCAGCCCTTTTTGCCTCTTTAGTTTCACAATCCACCAAAGCCAGATTCTACAGAACCAGTTCTGGAAGTGGTCAATCCACCATTAATGGTCTTTTCCAATGTAGAGGGGACCTTAGCAATGGCGATTGTTACAACTGTGGTTTGAAATGCTGTATAAAACTTGTGGCTCTATGAATGCTCCTGGAAGTGGGTTTGAAGAGCGTCGAGATACTTCTCTGTTTGTTTTGGAGAATGGTGTTGTGAGTGGCCATGGATTTTACACCACAAATTACCAATCTGTTTATGTTTTGGGGCAATGTGAAGGGGATTTGGGGGATTCAGATTGTGGTGAATGTGTTAAAAATGCTGTTCAAAGAGCTCAAGTTGAATGTGGAAGCTCAATTTCAGGCCAACTTTATCTCCATAGATGCTTTATAAGTTACAGTTATTACCCAAATGGGGTGCCCACAAGATCATCATCACCATCATCTTCATCTTCCTCCTCATCATGAGGAAATATAGGGAAAACAGTGTCTATATTTCTTGGAGCAACAGCAGGACTGGCATTTGTGGTCATTTGTTTGCTTTTTGCAAGAAGGTTAATGAAAAACATGATGATTATTGAAAGAAGCAAGATGAGATCTTTAAAGATGCAAAAACAATTCTTTATTTTTTATTTTTTCTTTTTTAATGAACAGAATGTCCCCTTTTTTCTAAAAAGGAATGTGAGTTTTTTTATGGTCAATAGGGTTTTTTTTCAAAATTGAGAATGAAATGAATGATATGTATGAAACTGAAATAATTTTTACACAAAGTGAAGATGAAGAATGTTGGGAATGAAAAATGGTGGTAACCCATTTTTGAAAAGGATACGAGTCTCGCTATTATTAATATTGAAAATAGAGAGACAAAGCTCAATGTACATGAGGGTTATACGAGAGCAATAGGAGGGGAGAATCAGTAGGCGCACCCAGGCATCTCAACTAGGTTGACACCCCTTAGTGCCCTCATCACATCCAAAAAGCGGAAAAAAAATCCTAAATACCATGTTTCTAAAAGCAATACAAGAGCCAAACAAACTATCCAAAACAGAAACATAAGTAAGGCAGCAAGCCAAAAATGGTGGTAACCCATTAAAAAAAAAGATAGTGGAGGACCTTTACCATGTTCTTTGGAGTTGTGATTTTACTCGGGTTGGCACATTTCTTTGATACATTATACTATATTTGCTAGGTTGTAGGGACTTGGGGTTGTAGGGAGTCGATCAAGGAATTTCTCCTCCACATGCCTTTTCGGGGGAATGATCTATTTATGTGGAAGGCACGGGTGTGTGCTATTTTATGGGGTATGAATGAGGAGAAAAACATTAGAATCTGCAGGAAGAGGGAGAGTTTTTGTACTGATGCTTGGGCCCCTAGATTCCTTGTTTCTCATTGGGCTCAAATATCTAGATATTTTTGTAATTTTTCACTTAGTCACATCTTAATGAAGAGACTTGTTTCTATCAATGAAAAGTTCGTTTCTGTTTCAAAAAAATCATGCCATGCATCCTTTATGTTTCTTTGTCGTTCCTTAACTTTTGTTTTTAGCACCTATATTTTTAATTCTATTGTATCCCAAAACATTAGTTTCTTGTCATTGCAACCTTTTCTTTTAAAAGAAACAGCATCGTTTCAGTTTGTTGTGGGCTTGGTGACTCTGATCTAAACCTAAGTTGGACTGCTAGGGGGGTTTGATTCTTTATTTTTCTTTTATTTTTTTAATAGTTTTTACCTTTCCTTGATTGCTTGGATTTCCAAGAGGGTGACTAAGAATCTTAGTCGAGGGCTTAAAAGCTGTGAAAAATTTATCTTGTACTTCTAGTTCTATTCATATTATCATCTAGTCCATATTGTGATGACTTGGTACTTTTGAAAAAAAAGAAAAGAAGACCAGATTTTATCTACTCCTTGATGGAACTATGATGAAATGGTAAGTGCCTATCTATTAAATCATCATTTAAAAATACACATTTGAAGGCCTATAATTATACAATTTCTCATTTGAATTTGAAATTCTTACCTGCCAGATCCAGAATGAAGGCTATCTTTTACAATTAGGTGTAAAAGATGCTCTACTGAACGCTCTTCTTGTGGCTGCCAAAAAGTTTAGTTCAGGTCCTCCTCAGGTGCTTCACCTCTTTCTTGAAATTTGAGCTTTTGTATCTTTTTATCATTAGAAATTTGTATCTTTGGTAAAAAAAAACAGATATTTGTTAATTGTGTAGATAGGTGTGCTTATTTTAAAATTTTGCCTTTTCTTTAAACTCCCTCATAAAATTATTATTCTCATATCCATGAAATGCATGATGTCTCTCACCAAAAATAGAAAAAATTATTTATTCATTTTTGTTTTGGTAAGAGGTAACTGTGTATGATGGAAAAGTTCGTTTCTTTTAGAAAAAGGAGATAACAGTTTATGAAGTTTGAAGTCTAAATCAAACCTATAACTTCTTTAACCGTAGTTCAAGCCTATAATGTCGTCCTCAGTTGGGGGTTTTTCGTGGCTCTATTTCTATTACAGAGTACCATATTATGTCTGTATTATTTGTTTAGTTAATTGTCTAAATGAGTTCTTAACTTATTACTTCTTCCTTACCTTAGGATATGCCCTCTGCTTTTGTGACAGCTTTTAACTCAAATCTGTCTTGCACTGTCTGCGCTTATTCTGAGAACAGTGGAGCACGGGAAACCCATTGATCGTCTTTTCTACAGTCTTCAGAATCTGCAGAGTGTGGACAACGGCAATTTGGCTGTTCTGGAGATGCTTACTGTTTTACCTGAAGAAGTCGTTGACAGCCAAAATGTTGATTGTAAAATAAGTTCATCCTGTAGGAGCCAATATGCCCGAGAGGTGTAGGATCTTTCTATCTGTACTAATGTGTTTGCAGCCATGAGCCTTCTAATTTATGGTCCACTTCATCTTGTATTGTTTTCCATTTTGTTGAACTTTAATCCTGCAGCTTCTGTTGCACACTCCTATGGTTCTTGAGTTCCTACTGCAGCAATCTGAGAAAGGGTTTGATTGTGGGACTCAGTCGCAGGAAAAGAACAGAAAAATTCTTCGATGTTTGCTGAGTTGGGTATGAAGCTAAAATTTATAATGATCTATTGGGTAGTGCTTTTTGTTTTTTTATTTCTGTCTGTCTATAAATTTCTAGGGCTAAGTATTGACTATTATCTCATATAAAGAAAAAGTACTTTGCATGTTTTTCTTTAGCTTTTGGTATGAAATTTAACTTTCATTTATTATGTCTCATTTCCTCGTGAATGTTACAGCGTCACTATGTTTTTTCTTCTTCATAAAAGTTAGTTTTCTTGTGTCCAGGTGCGTGTTGGGTGCTTCTCTGAGATACCTCAGGGTTCATTGCCAACCCATCCCCTCCTTAATTTTGTGCTCAAGTCTCTGCAGGTAGGAGTTTTAGTCCTTACAAATTGCAGTCTGCTTGTTTAGCATCTAAAAGTTATTCTTGTGTAGGATGTAGCTTCGTTTGATTTGGCCATTGAAGTTCTTGTTGAGCTTGTGAGTAGACATGAGGTATGTATCACCCCTTATGAGCAA ATGGAATTGCGAATGAAAGTCAGTCAAGCAGTTCACGTTCTAAATCATGATACCCAATCTTGCAACCGCGTGGCAGCAAATCAATGGTTAGTTCAGTTTCAACAGACAGGTGCTGCTTGGGAAGTTGCTACTGCTATCCTTACCTCCGATCATGTTCAGCCTTCAATGTCCTCCTTTGTCCCTGATTTGGAAGTCGAGTTCTTTGCAGCTCAGATTCTTAAACGCAAGATCCAGAATGAAGGCTATCTTTTACAATTAGGTGTAAAAGATGCTCTACTGAACGCTCTTCTTGTGGCTGCCAAAAAGTTTAGTTCAGGTCCTCCTCAGCTTTTAACTCAAATCTGTCTTGCACTGTCTGCGCTTATTCTGAGAACAGTGGAGCACGGGAAACCCATTGATCGTCTTTTCTACAGTCTTCAGAATCTGCAGAGTGTGGACAACGGCAATTTGGCTGTTCTGGAGATGCTTACTGTTTTACCTGAAGAAGTCGTTGACAGCCAAAATGTTGATTGTAAAATAAGTTCATCCTGTAGGAGCCAATATGCCCGAGAGCTTCTGTTGCACACTCCTATGGTTCTTGAGTTCCTACTGCAGCAATCTGAGAAAGGGTTTGATTGTGGGACTCAGTCGCAGGAAAAGAACAGAAAAATTCTTCGATGTTTGCTGAGTTGGGTGCGTGTTGGGTGCTTCTCTGAGATACCTCAGGGTTCATTGCCAACCCATCCCCTCCTTAATTTTGTGCTCAAGTCTCTGCAGGATGTAGCTTCGTTTGATTTGGCCATTGAAGTTCTTGTTGAGCTTGTGAGTAGACATGAGGTATGTATCACCCCTTATGAGCAA ATGGAATTGCGAATGAAAGTCAGTCAAGCAGTTCACGTTCTAAATCATGATACCCAATCTTGCAACCGCGTGGCAGCAAATCAATGGTTAGTTCAGTTTCAACAGACAGGTGCTGCTTGGGAAGTTGCTACTGCTATCCTTACCTCCGATCATGTTCAGCCTTCAATGTCCTCCTTTGTCCCTGATTTGGAAGTCGAGTTCTTTGCAGCTCAGATTCTTAAACGCAAGATCCAGAATGAAGGCTATCTTTTACAATTAGGTGTAAAAGATGCTCTACTGAACGCTCTTCTTGTGGCTGCCAAAAAGTTTAGTTCAGGTCCTCCTCAGCTTTTAACTCAAATCTGTCTTGCACTGTCTGCGCTTATTCTGAGAACAGTGGAGCACGGGAAACCCATTGATCGTCTTTTCTACAGTCTTCAGAATCTGCAGAGTGTGGACAACGGCAATTTGGCTGTTCTGGAGATGCTTACTGTTTTACCTGAAGAAGTCGTTGACAGCCAAAATGTTGATTGTAAAATAAGTTCATCCTGTAGGAGCCAATATGCCCGAGAGCTTCTGTTGCACACTCCTATGGTTCTTGAGTTCCTACTGCAGCAATCTGAGAAAGGGTTTGATTGTGGGACTCAGTCGCAGGAAAAGAACAGAAAAATTCTTCGATGTTTGCTGAGTTGGGTGCGTGTTGGGTGCTTCTCTGAGATACCTCAGGGTTCATTGCCAACCCATCCCCTCCTTAATTTTGTGCTCAAGTCTCTGCAGGATGTAGCTTCGTTTGATTTGGCCATTGAAGTTCTTGTTGAGCTTGTGAGTAGACATGAGGTATGTATCACCCCTTATGAGCAA
BLAST of CSPI03G20140 vs. Swiss-Prot
Match: YNR7_SCHPO (Uncharacterized protein C11G11.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC11G11.07 PE=3 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16 Identity = 75/259 (28.96%), Postives = 114/259 (44.02%), Query Frame = 1
BLAST of CSPI03G20140 vs. Swiss-Prot
Match: MOS14_ARATH (Transportin MOS14 OS=Arabidopsis thaliana GN=MOS14 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.5e-16 Identity = 78/269 (29.00%), Postives = 118/269 (43.87%), Query Frame = 1
BLAST of CSPI03G20140 vs. Swiss-Prot
Match: IP13A_DICDI (Importin-13 homolog A OS=Dictyostelium discoideum GN=ipo13A PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 5.7e-11 Identity = 58/217 (26.73%), Postives = 102/217 (47.00%), Query Frame = 1
BLAST of CSPI03G20140 vs. Swiss-Prot
Match: IP13B_DICDI (Importin-13 homolog B OS=Dictyostelium discoideum GN=ipo13B PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07 Identity = 49/206 (23.79%), Postives = 93/206 (45.15%), Query Frame = 1
BLAST of CSPI03G20140 vs. TrEMBL
Match: A0A0A0LAK7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G254030 PE=4 SV=1) HSP 1 Score: 534.6 bits (1376), Expect = 7.0e-149 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1
BLAST of CSPI03G20140 vs. TrEMBL
Match: M5WSL5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002473mg PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 2.3e-115 Identity = 219/272 (80.51%), Postives = 237/272 (87.13%), Query Frame = 1
BLAST of CSPI03G20140 vs. TrEMBL
Match: A0A061EF46_THECC (Eukaryotic release factor 1-2 OS=Theobroma cacao GN=TCM_047035 PE=3 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 4.3e-114 Identity = 216/272 (79.41%), Postives = 241/272 (88.60%), Query Frame = 1
BLAST of CSPI03G20140 vs. TrEMBL
Match: A0A067L3U1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26921 PE=3 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 9.5e-114 Identity = 212/272 (77.94%), Postives = 236/272 (86.76%), Query Frame = 1
BLAST of CSPI03G20140 vs. TrEMBL
Match: A0A0D2MTW5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G047900 PE=3 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 6.2e-113 Identity = 216/272 (79.41%), Postives = 239/272 (87.87%), Query Frame = 1
BLAST of CSPI03G20140 vs. TAIR10
Match: AT1G12930.1 (AT1G12930.1 ARM repeat superfamily protein) HSP 1 Score: 316.2 bits (809), Expect = 2.0e-86 Identity = 169/272 (62.13%), Postives = 211/272 (77.57%), Query Frame = 1
BLAST of CSPI03G20140 vs. TAIR10
Match: AT5G62600.1 (AT5G62600.1 ARM repeat superfamily protein) HSP 1 Score: 86.7 bits (213), Expect = 2.6e-17 Identity = 78/269 (29.00%), Postives = 118/269 (43.87%), Query Frame = 1
BLAST of CSPI03G20140 vs. NCBI nr
Match: gi|778680546|ref|XP_011651341.1| (PREDICTED: transportin-3 isoform X1 [Cucumis sativus]) HSP 1 Score: 534.6 bits (1376), Expect = 1.0e-148 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1
BLAST of CSPI03G20140 vs. NCBI nr
Match: gi|700202564|gb|KGN57697.1| (hypothetical protein Csa_3G254030 [Cucumis sativus]) HSP 1 Score: 534.6 bits (1376), Expect = 1.0e-148 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1
BLAST of CSPI03G20140 vs. NCBI nr
Match: gi|659098062|ref|XP_008449959.1| (PREDICTED: transportin-3 isoform X1 [Cucumis melo]) HSP 1 Score: 529.6 bits (1363), Expect = 3.2e-147 Identity = 269/272 (98.90%), Postives = 270/272 (99.26%), Query Frame = 1
BLAST of CSPI03G20140 vs. NCBI nr
Match: gi|595925760|ref|XP_007215007.1| (hypothetical protein PRUPE_ppa002473mg [Prunus persica]) HSP 1 Score: 423.3 bits (1087), Expect = 3.3e-115 Identity = 219/272 (80.51%), Postives = 237/272 (87.13%), Query Frame = 1
BLAST of CSPI03G20140 vs. NCBI nr
Match: gi|645250423|ref|XP_008231206.1| (PREDICTED: transportin-3 isoform X2 [Prunus mume]) HSP 1 Score: 419.5 bits (1077), Expect = 4.7e-114 Identity = 219/272 (80.51%), Postives = 236/272 (86.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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