CSPI02G14340 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTAAACTATAGAATAAAAAAGTATTATTTTTAAAAAATATAGGAAAAATAAATTTATATAGGAGGGATATAAATAGAGGGTTGATGGTTATACATTAATTGTGATTGGCATATAGGAAGAGATGTCAAGCTTATTGAAGTTATTCAGAAGCTGTTCTGGAAAGCGACCATCCAAAAACACTTCCTTTTCCATACCAATCAAAGAAAGGTCCAATTCTTCCTCACCCTCTTCAAAGCAATTCCGCCCAAACTTGGAGGAGATCAAATGGGTATGAACAATTCTTTTTTTGCATGAATTATTTCAAATCTTTTTATGAAAAAAACATTGAATTATTTCAAATGTTCATAAGCAATAAAGTTGCTGAGAAAGTTATGAACTGGAACTCTCTATAACAACATGCTGTGCTACGTACGTTCGTAGTAATGATCTCTTTTGGATTTAATAGGCGTTTGAGAAGTTTGACTCGAACAAGGATGGAAAAATCTCATTTGAGGAGTACAAGGAAGCTCACCGAGGCTTGGCTGGAAGCAAAGAGATCACAGACGCAGAGGCAGAGAAGTCATTCAAGCTTGTGGATGTAGATGGCGATGGATTCGTGGATTTGAAGGAGTTCGTGGAGCTGTACACGATGAGCAGCGGGGAAGTGAAGGTGGGCGACATCGAAAGTGCCTTCAAAGTTTATGATTCCAATGGAGATGGGAAGATAAGTGCAGAGGAGGTGATGGGGATCATGAAGATATTGGGGGAGAACACCACCTTGAAGGCTTGCAAGCAAATGGTGAAGGGTGTGGACATGGATGGGGATGGCTTTATTGATGTCCAAGAGTTTTCTAAGCTCATGGGTAAGTATTCGAGTAAGTTTCAAAATTAAAGAACCTAAAACTACAACTTCGGACGCCCCGTATCCATTTTAATTTTTCTTGAGTGTAACGGTTGATCTCTAGCTTAATTTTCAAAAACAAAAACAAAAAAATAAAATGATTGGAAAACGAGAGCTACACATGTCTCTAGTTTTTAGACAAATGAATGTGGAAAACAAAAATTCTAAGCTATATTTGAAGTTTGTATCCAATAATTAGGAGGATAGTTATATTGTGACAATGTTGGTGATTAATGTGCGACTACTAGTAGTTATTATGCAACGTGTAGATTTGTGATGTAATTTTTGTTAAGTTGTCAACATCTTCAAACGATGAAGGGTTCAATATTGATATAGTGAATTGAAAATCTCTATTATATAAGAAAATTGATGTCAAGATTACTTTTATTGATATTTTCGTCAAGATTTACATTATTGTCAACATTCTTATGATCGGTG ATGTCAAGCTTATTGAAGTTATTCAGAAGCTGTTCTGGAAAGCGACCATCCAAAAACACTTCCTTTTCCATACCAATCAAAGAAAGGTCCAATTCTTCCTCACCCTCTTCAAAGCAATTCCGCCCAAACTTGGAGGAGATCAAATGGGCGTTTGAGAAGTTTGACTCGAACAAGGATGGAAAAATCTCATTTGAGGAGTACAAGGAAGCTCACCGAGGCTTGGCTGGAAGCAAAGAGATCACAGACGCAGAGGCAGAGAAGTCATTCAAGCTTGTGGATGTAGATGGCGATGGATTCGTGGATTTGAAGGAGTTCGTGGAGCTGTACACGATGAGCAGCGGGGAAGTGAAGGTGGGCGACATCGAAAGTGCCTTCAAAGTTTATGATTCCAATGGAGATGGGAAGATAAGTGCAGAGGAGGTGATGGGGATCATGAAGATATTGGGGGAGAACACCACCTTGAAGGCTTGCAAGCAAATGGTGAAGGGTGTGGACATGGATGGGGATGGCTTTATTGATGTCCAAGAGTTTTCTAAGCTCATGGGTAAGTATTCGAGTAAGTTTCAAAATTAA ATGTCAAGCTTATTGAAGTTATTCAGAAGCTGTTCTGGAAAGCGACCATCCAAAAACACTTCCTTTTCCATACCAATCAAAGAAAGGTCCAATTCTTCCTCACCCTCTTCAAAGCAATTCCGCCCAAACTTGGAGGAGATCAAATGGGCGTTTGAGAAGTTTGACTCGAACAAGGATGGAAAAATCTCATTTGAGGAGTACAAGGAAGCTCACCGAGGCTTGGCTGGAAGCAAAGAGATCACAGACGCAGAGGCAGAGAAGTCATTCAAGCTTGTGGATGTAGATGGCGATGGATTCGTGGATTTGAAGGAGTTCGTGGAGCTGTACACGATGAGCAGCGGGGAAGTGAAGGTGGGCGACATCGAAAGTGCCTTCAAAGTTTATGATTCCAATGGAGATGGGAAGATAAGTGCAGAGGAGGTGATGGGGATCATGAAGATATTGGGGGAGAACACCACCTTGAAGGCTTGCAAGCAAATGGTGAAGGGTGTGGACATGGATGGGGATGGCTTTATTGATGTCCAAGAGTTTTCTAAGCTCATGGGTAAGTATTCGAGTAAGTTTCAAAATTAA
BLAST of CSPI02G14340 vs. Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29 Identity = 77/177 (43.50%), Postives = 113/177 (63.84%), Query Frame = 1
BLAST of CSPI02G14340 vs. Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2) HSP 1 Score: 115.2 bits (287), Expect = 8.1e-25 Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 1
BLAST of CSPI02G14340 vs. Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.1e-24 Identity = 59/142 (41.55%), Postives = 91/142 (64.08%), Query Frame = 1
BLAST of CSPI02G14340 vs. Swiss-Prot
Match: CML32_ARATH (Probable calcium-binding protein CML32 OS=Arabidopsis thaliana GN=CML32 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.4e-23 Identity = 63/143 (44.06%), Postives = 86/143 (60.14%), Query Frame = 1
BLAST of CSPI02G14340 vs. Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.2e-21 Identity = 56/142 (39.44%), Postives = 88/142 (61.97%), Query Frame = 1
BLAST of CSPI02G14340 vs. TrEMBL
Match: A0A0A0LMP3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G286450 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 2.2e-98 Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 1
BLAST of CSPI02G14340 vs. TrEMBL
Match: W9RW36_9ROSA (Calmodulin-like protein 1 OS=Morus notabilis GN=L484_002706 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 4.3e-41 Identity = 85/147 (57.82%), Postives = 113/147 (76.87%), Query Frame = 1
BLAST of CSPI02G14340 vs. TrEMBL
Match: I1LHF1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G056500 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 4.5e-38 Identity = 87/172 (50.58%), Postives = 124/172 (72.09%), Query Frame = 1
BLAST of CSPI02G14340 vs. TrEMBL
Match: A0A0B2SA84_GLYSO (Calmodulin-like protein 1 OS=Glycine soja GN=glysoja_003815 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 4.5e-38 Identity = 87/172 (50.58%), Postives = 124/172 (72.09%), Query Frame = 1
BLAST of CSPI02G14340 vs. TrEMBL
Match: G7K7Z2_MEDTR (EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g017550 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 4.5e-38 Identity = 94/181 (51.93%), Postives = 124/181 (68.51%), Query Frame = 1
BLAST of CSPI02G14340 vs. TAIR10
Match: AT2G15680.1 (AT2G15680.1 Calcium-binding EF-hand family protein) HSP 1 Score: 131.3 bits (329), Expect = 6.2e-31 Identity = 77/177 (43.50%), Postives = 113/177 (63.84%), Query Frame = 1
BLAST of CSPI02G14340 vs. TAIR10
Match: AT5G37770.1 (AT5G37770.1 EF hand calcium-binding protein family) HSP 1 Score: 115.2 bits (287), Expect = 4.6e-26 Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 1
BLAST of CSPI02G14340 vs. TAIR10
Match: AT1G66400.1 (AT1G66400.1 calmodulin like 23) HSP 1 Score: 113.2 bits (282), Expect = 1.7e-25 Identity = 59/142 (41.55%), Postives = 91/142 (64.08%), Query Frame = 1
BLAST of CSPI02G14340 vs. TAIR10
Match: AT5G17470.1 (AT5G17470.1 EF hand calcium-binding protein family) HSP 1 Score: 109.4 bits (272), Expect = 2.5e-24 Identity = 63/143 (44.06%), Postives = 86/143 (60.14%), Query Frame = 1
BLAST of CSPI02G14340 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family) HSP 1 Score: 103.2 bits (256), Expect = 1.8e-22 Identity = 56/142 (39.44%), Postives = 88/142 (61.97%), Query Frame = 1
BLAST of CSPI02G14340 vs. NCBI nr
Match: gi|449460606|ref|XP_004148036.1| (PREDICTED: probable calcium-binding protein CML32 [Cucumis sativus]) HSP 1 Score: 366.3 bits (939), Expect = 3.2e-98 Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 1
BLAST of CSPI02G14340 vs. NCBI nr
Match: gi|659115973|ref|XP_008457835.1| (PREDICTED: probable calcium-binding protein CML32 [Cucumis melo]) HSP 1 Score: 347.4 bits (890), Expect = 1.6e-92 Identity = 180/189 (95.24%), Postives = 182/189 (96.30%), Query Frame = 1
BLAST of CSPI02G14340 vs. NCBI nr
Match: gi|502160872|ref|XP_004511937.1| (PREDICTED: calmodulin-like protein 1 [Cicer arietinum]) HSP 1 Score: 176.4 bits (446), Expect = 4.7e-41 Identity = 100/181 (55.25%), Postives = 129/181 (71.27%), Query Frame = 1
BLAST of CSPI02G14340 vs. NCBI nr
Match: gi|703106274|ref|XP_010098458.1| (Calmodulin-like protein 1 [Morus notabilis]) HSP 1 Score: 176.0 bits (445), Expect = 6.2e-41 Identity = 85/147 (57.82%), Postives = 113/147 (76.87%), Query Frame = 1
BLAST of CSPI02G14340 vs. NCBI nr
Match: gi|470103220|ref|XP_004288041.1| (PREDICTED: calmodulin-like protein 1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 171.4 bits (433), Expect = 1.5e-39 Identity = 95/183 (51.91%), Postives = 124/183 (67.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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