CSPI02G12990 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCGAATTCAGCTGAAAAATATTCAAACAAAACTTCTTCCTCTAGTTGGTTTCGTCCCACCCAGATAAAAACTTCAGGCATTACAAACGGTCCTTTATCTCAAACAAATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGAATGTGCCAAAAGGCCATGTGGCTGTTTACGTAGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCGATACCTTACTTAAACCATCCGTCATTCCAACAACTACTCACTCATGCAGAGGAAGAGTTTGGTTTCCATCATCCTCAAGGGGGTCTGACAATCCCTTGCAAAGAGGATGCCTTTATTAATCTCACTTCAAGGTTGCAAGTCTCTTGAAGTACAAAGAGTAAAGTGAAACCTTTCATTTCTAACAATTTTTTCCTGGGTTTTTCTGATTCATTCAGAATTTTGTAGAATGTAACACCTTCCTGCCTAAAAATGTGAGGCATTATAAAGGTGTAGTGTATTTACTAACAATCAAAAGAATAGACTCATCACTTTCAGCA ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGAATGTGCCAAAAGGCCATGTGGCTGTTTACGTAGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCGATACCTTACTTAAACCATCCGTCATTCCAACAACTACTCACTCATGCAGAGGAAGAGTTTGGTTTCCATCATCCTCAAGGGGGTCTGACAATCCCTTGCAAAGAGGATGCCTTTATTAATCTCACTTCAAGGTTGCAAGTCTCTTGA ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGAATGTGCCAAAAGGCCATGTGGCTGTTTACGTAGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCGATACCTTACTTAAACCATCCGTCATTCCAACAACTACTCACTCATGCAGAGGAAGAGTTTGGTTTCCATCATCCTCAAGGGGGTCTGACAATCCCTTGCAAAGAGGATGCCTTTATTAATCTCACTTCAAGGTTGCAAGTCTCTTGA
BLAST of CSPI02G12990 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 4.6e-24 Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 1
BLAST of CSPI02G12990 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23 Identity = 53/84 (63.10%), Postives = 62/84 (73.81%), Query Frame = 1
BLAST of CSPI02G12990 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 3.9e-23 Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 1
BLAST of CSPI02G12990 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 8.7e-23 Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 1
BLAST of CSPI02G12990 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22 Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1
BLAST of CSPI02G12990 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 4.8e-44 Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 1
BLAST of CSPI02G12990 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 2.0e-42 Identity = 84/97 (86.60%), Postives = 90/97 (92.78%), Query Frame = 1
BLAST of CSPI02G12990 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 3.4e-42 Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 1
BLAST of CSPI02G12990 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 4.2e-40 Identity = 82/97 (84.54%), Postives = 87/97 (89.69%), Query Frame = 1
BLAST of CSPI02G12990 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 9.3e-40 Identity = 79/97 (81.44%), Postives = 89/97 (91.75%), Query Frame = 1
BLAST of CSPI02G12990 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 114.4 bits (285), Expect = 4.0e-26 Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = 1
BLAST of CSPI02G12990 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.1 bits (279), Expect = 2.0e-25 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 1
BLAST of CSPI02G12990 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.7 bits (278), Expect = 2.6e-25 Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 1
BLAST of CSPI02G12990 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.9 bits (276), Expect = 4.4e-25 Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 1
BLAST of CSPI02G12990 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 109.4 bits (272), Expect = 1.3e-24 Identity = 53/84 (63.10%), Postives = 62/84 (73.81%), Query Frame = 1
BLAST of CSPI02G12990 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus]) HSP 1 Score: 184.9 bits (468), Expect = 6.8e-44 Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 1
BLAST of CSPI02G12990 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 183.7 bits (465), Expect = 1.5e-43 Identity = 86/97 (88.66%), Postives = 93/97 (95.88%), Query Frame = 1
BLAST of CSPI02G12990 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 181.4 bits (459), Expect = 7.6e-43 Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 1
BLAST of CSPI02G12990 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 179.5 bits (454), Expect = 2.9e-42 Identity = 84/97 (86.60%), Postives = 90/97 (92.78%), Query Frame = 1
BLAST of CSPI02G12990 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 4.9e-42 Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |