CSPI01G33710 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTATATGCTGATGAAGAATTGATCTCAATTGGTCGACCTGAAACAACAGTGACCATTATTAATAAATTGGCTGGCCCACTGCTAGGCGTTCACTGTAGATCAAAGGACGATGACTTGGGAGCCCAGTTCCTTGAGTCTGGACGTAGTTACTCCTTTCACTTTAAACCTAATATTTGGGGCACAACAGAATTTACTTGCGCGTTTCAATTTGTGCAAGGCGAGATGCAAAAGTTCACCATCTATAACTTTCACAGGGACACAAATCGTTGCACTGATTGCTCGTGGGAAATTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTGGAACTTATAACATGTGCTTTCCTTGGAACTAG ATGCTATATGCTGATGAAGAATTGATCTCAATTGGTCGACCTGAAACAACAGTGACCATTATTAATAAATTGGCTGGCCCACTGCTAGGCGTTCACTGTAGATCAAAGGACGATGACTTGGGAGCCCAGTTCCTTGAGTCTGGACGTAGTTACTCCTTTCACTTTAAACCTAATATTTGGGGCACAACAGAATTTACTTGCGCGTTTCAATTTGTGCAAGGCGAGATGCAAAAGTTCACCATCTATAACTTTCACAGGGACACAAATCGTTGCACTGATTGCTCGTGGGAAATTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTGGAACTTATAACATGTGCTTTCCTTGGAACTAG ATGCTATATGCTGATGAAGAATTGATCTCAATTGGTCGACCTGAAACAACAGTGACCATTATTAATAAATTGGCTGGCCCACTGCTAGGCGTTCACTGTAGATCAAAGGACGATGACTTGGGAGCCCAGTTCCTTGAGTCTGGACGTAGTTACTCCTTTCACTTTAAACCTAATATTTGGGGCACAACAGAATTTACTTGCGCGTTTCAATTTGTGCAAGGCGAGATGCAAAAGTTCACCATCTATAACTTTCACAGGGACACAAATCGTTGCACTGATTGCTCGTGGGAAATTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTGGAACTTATAACATGTGCTTTCCTTGGAACTAG
BLAST of CSPI01G33710 vs. TrEMBL
Match: B0F818_CUCME (Self-incompatibility protein 2 OS=Cucumis melo PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 3.5e-36 Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1
BLAST of CSPI01G33710 vs. TrEMBL
Match: B0F817_CUCME (Self-incompatibility protein 1 OS=Cucumis melo PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 3.5e-36 Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1
BLAST of CSPI01G33710 vs. TrEMBL
Match: B9SD51_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1070100 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.9e-21 Identity = 51/104 (49.04%), Postives = 62/104 (59.62%), Query Frame = 1
BLAST of CSPI01G33710 vs. TrEMBL
Match: B9RWP1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1023120 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 9.2e-21 Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 1
BLAST of CSPI01G33710 vs. TrEMBL
Match: A0A078DH16_BRANA (BnaC08g00850D protein OS=Brassica napus GN=BnaC08g00850D PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.6e-20 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 1
BLAST of CSPI01G33710 vs. TAIR10
Match: AT1G04645.1 (AT1G04645.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 104.0 bits (258), Expect = 6.7e-23 Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 1
BLAST of CSPI01G33710 vs. TAIR10
Match: AT3G17080.1 (AT3G17080.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 93.2 bits (230), Expect = 1.2e-19 Identity = 49/116 (42.24%), Postives = 66/116 (56.90%), Query Frame = 1
BLAST of CSPI01G33710 vs. TAIR10
Match: AT3G16970.1 (AT3G16970.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 93.2 bits (230), Expect = 1.2e-19 Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 1
BLAST of CSPI01G33710 vs. TAIR10
Match: AT4G16195.1 (AT4G16195.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 89.7 bits (221), Expect = 1.3e-18 Identity = 47/111 (42.34%), Postives = 65/111 (58.56%), Query Frame = 1
BLAST of CSPI01G33710 vs. TAIR10
Match: AT5G12060.1 (AT5G12060.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 87.4 bits (215), Expect = 6.5e-18 Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 1
BLAST of CSPI01G33710 vs. NCBI nr
Match: gi|659114866|ref|XP_008457263.1| (PREDICTED: uncharacterized protein LOC103496988 [Cucumis melo]) HSP 1 Score: 205.7 bits (522), Expect = 4.7e-50 Identity = 92/120 (76.67%), Postives = 101/120 (84.17%), Query Frame = 1
BLAST of CSPI01G33710 vs. NCBI nr
Match: gi|659128416|ref|XP_008464194.1| (PREDICTED: uncharacterized protein LOC103502132 [Cucumis melo]) HSP 1 Score: 197.6 bits (501), Expect = 1.3e-47 Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 1
BLAST of CSPI01G33710 vs. NCBI nr
Match: gi|164449263|gb|ABY56092.1| (self-incompatibility protein 2 [Cucumis melo]) HSP 1 Score: 159.1 bits (401), Expect = 5.0e-36 Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1
BLAST of CSPI01G33710 vs. NCBI nr
Match: gi|659121590|ref|XP_008460735.1| (PREDICTED: uncharacterized protein LOC103499497 [Cucumis melo]) HSP 1 Score: 159.1 bits (401), Expect = 5.0e-36 Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1
BLAST of CSPI01G33710 vs. NCBI nr
Match: gi|223536850|gb|EEF38489.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 110.2 bits (274), Expect = 2.7e-21 Identity = 51/104 (49.04%), Postives = 62/104 (59.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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