CSPI01G33160 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGACACCCCTTTACTGCCAAGCAAGTGGCCGAAGTGTTTATTGACAGGGTAGTGAGTACACATGGAATACCCAAGTCAATCATATCCGACAGAGACAAAATTTTCATTAGCAATTTTTGGAAAGAACTATTTGCTAACATGGGGACAATCCTAAAAAGAAGTATGATGTTTCACCCACAAACGGATGAAGTGGTAAACCGAAAGGGTAAACTGCTGCGTAGAAACATATTTGAGGTGTTTTTGTAATGAACAGCCTCAGAAGTGGAATAAATTCATTCCTTGGGCAGAATTATGGTATAACACGACCTTTCATGCTTCCACAAGATCCAATCCCTTCCAGATTGTATATGGCAGACAACCCCTCGATATCATATGGCAACAACAAGACTCCTCAAGACACCTCACAATGAAGTGGAACAAATGCTAAAAGAGAGGGATTTAGCCCTGAATGCTCTAAAGGAAAACTTGAACATTGCGCAAACCGAAGGAAGAAAATGGTCAACACAAAAAGGAGAGAGCTTAAGTTCAAGGTGGGAGATGAGGTATATCTCAAGCTTCGACCATATAGGCAACGTTCGTTAGCACGGAAGAGATCTGACAAGTCGGCTCCTAAATTCTATGGACCATATAAGATCGTTGAGGAAATTGGGGAAGTGGTGTATAGACTACAATTACCTCCCAAAGCCTCTGTTCATGATGTCTTCCACATTTCCCAACTTAAATTGAAATTGGGGAAACAGCAAGTGGTGCAAATCCAACAACCAGTCCTGCCAGAAGACTTTGAACTACAATTAAGACCAGAGACTATGCTGAGGATCCGTTGGAATACTGAACTAGGGGCCAATGAC ATGAGACACCCCTTTACTGCCAAGCAAGTGGCCGAAGTGTTTATTGACAGGGTAGTGAGTACACATGGAATACCCAAGTCAATCATATCCGACAGAGACAAAATTTTCATTAGCAATTTTTGGAAAGAACTATTTGCTAACATGGGGACAATCCTAAAAAGAAGTATGATGTTTCACCCACAAACGGATGAAGTGAATTATGGTATAACACGACCTTTCATGCTTCCACAAGATCCAATCCCTTCCAGATTTGGAACAAATGCTAAAAGAGAGGGATTTAGCCCTGAATGCTCTAAAGGAAAACTTGAACATTGCGCAAACCGAAGGAAGAAAATGGTCAACACAAAAAGGAGAGAGCTTAAGTTCAAGGTGGGAGATGAGGTATATCTCAAGCTTCGACCATATAGGCAACGTTCGTTAGCACGGAAGAGATCTGACAAGTCGGCTCCTAAATTCTATGGACCATATAAGATCGTTGAGGAAATTGGGGAAGTGGTGTATAGACTACAATTACCTCCCAAAGCCTCTGTTCATGATGTCTTCCACATTTCCCAACTTAAATTGAAATTGGGGAAACAGCAAGTGGTGCAAATCCAACAACCAGTCCTGCCAGAAGACTTTGAACTACAATTAAGACCAGAGACTATGCTGAGGATCCGTTGGAATACTGAACTAGGGGCCAATGAC ATGAGACACCCCTTTACTGCCAAGCAAGTGGCCGAAGTGTTTATTGACAGGGTAGTGAGTACACATGGAATACCCAAGTCAATCATATCCGACAGAGACAAAATTTTCATTAGCAATTTTTGGAAAGAACTATTTGCTAACATGGGGACAATCCTAAAAAGAAGTATGATGTTTCACCCACAAACGGATGAAGTGAATTATGGTATAACACGACCTTTCATGCTTCCACAAGATCCAATCCCTTCCAGATTTGGAACAAATGCTAAAAGAGAGGGATTTAGCCCTGAATGCTCTAAAGGAAAACTTGAACATTGCGCAAACCGAAGGAAGAAAATGGTCAACACAAAAAGGAGAGAGCTTAAGTTCAAGGTGGGAGATGAGGTATATCTCAAGCTTCGACCATATAGGCAACGTTCGTTAGCACGGAAGAGATCTGACAAGTCGGCTCCTAAATTCTATGGACCATATAAGATCGTTGAGGAAATTGGGGAAGTGGTGTATAGACTACAATTACCTCCCAAAGCCTCTGTTCATGATGTCTTCCACATTTCCCAACTTAAATTGAAATTGGGGAAACAGCAAGTGGTGCAAATCCAACAACCAGTCCTGCCAGAAGACTTTGAACTACAATTAAGACCAGAGACTATGCTGAGGATCCGTTGGAATACTGAACTAGGGGCCAATGAC
BLAST of CSPI01G33160 vs. Swiss-Prot
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06 Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 1
BLAST of CSPI01G33160 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06 Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 1
BLAST of CSPI01G33160 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06 Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 1
BLAST of CSPI01G33160 vs. Swiss-Prot
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-2 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06 Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 1
BLAST of CSPI01G33160 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06 Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 1
BLAST of CSPI01G33160 vs. TrEMBL
Match: A0A151RRQ4_CAJCA (Retrotransposable element Tf2 OS=Cajanus cajan GN=KK1_033252 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 3.3e-40 Identity = 109/258 (42.25%), Postives = 142/258 (55.04%), Query Frame = 1
BLAST of CSPI01G33160 vs. TrEMBL
Match: A0A151TXQ4_CAJCA (Transposon Ty3-I Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_011106 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 5.0e-36 Identity = 87/240 (36.25%), Postives = 135/240 (56.25%), Query Frame = 1
BLAST of CSPI01G33160 vs. TrEMBL
Match: A0A151TXZ2_CAJCA (Retrotransposable element Tf2 OS=Cajanus cajan GN=KK1_011108 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.5e-35 Identity = 94/252 (37.30%), Postives = 143/252 (56.75%), Query Frame = 1
BLAST of CSPI01G33160 vs. TrEMBL
Match: A0A151T3I1_CAJCA (Retrotransposable element Tf2 (Fragment) OS=Cajanus cajan GN=KK1_016104 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34 Identity = 88/236 (37.29%), Postives = 131/236 (55.51%), Query Frame = 1
BLAST of CSPI01G33160 vs. TrEMBL
Match: A5AD26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011228 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.6e-34 Identity = 93/258 (36.05%), Postives = 131/258 (50.78%), Query Frame = 1
BLAST of CSPI01G33160 vs. NCBI nr
Match: gi|659094491|ref|XP_008448087.1| (PREDICTED: uncharacterized protein LOC103490375 [Cucumis melo]) HSP 1 Score: 180.6 bits (457), Expect = 3.0e-42 Identity = 90/131 (68.70%), Postives = 107/131 (81.68%), Query Frame = 1
BLAST of CSPI01G33160 vs. NCBI nr
Match: gi|1012333858|gb|KYP45237.1| (Retrotransposable element Tf2 [Cajanus cajan]) HSP 1 Score: 173.3 bits (438), Expect = 4.8e-40 Identity = 109/258 (42.25%), Postives = 142/258 (55.04%), Query Frame = 1
BLAST of CSPI01G33160 vs. NCBI nr
Match: gi|923614274|ref|XP_013745228.1| (PREDICTED: uncharacterized protein LOC106447810 [Brassica napus]) HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37 Identity = 100/278 (35.97%), Postives = 138/278 (49.64%), Query Frame = 1
BLAST of CSPI01G33160 vs. NCBI nr
Match: gi|1012360648|gb|KYP71832.1| (Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]) HSP 1 Score: 159.5 bits (402), Expect = 7.2e-36 Identity = 87/240 (36.25%), Postives = 135/240 (56.25%), Query Frame = 1
BLAST of CSPI01G33160 vs. NCBI nr
Match: gi|731403730|ref|XP_010655166.1| (PREDICTED: uncharacterized protein LOC104880390 [Vitis vinifera]) HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35 Identity = 100/273 (36.63%), Postives = 134/273 (49.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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