CSPI01G13870 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCCCACCAAGTGGCGAAAACTCTCAGCAATGGGCTTTCGCAAAGGTTTCATCGCATTCATTTTCCTTCTCTTTGATCAGCAAAATTAAAGCTTTCCATCGGAAAACGATTCAAGTTCTATTCCCAAAGATGTCTTCTGGGTTGAGTTCACTATCATCCAGTGATGAACTCGACAATTTCAACCCTAGAACATCACCCTCTACGCCACCTAAACCTCTCGAAGAAGAATTGGCATCTCTAGCATTGACCTTACCACATCCCCAGCTCCTCTCTGACCAAGATGATGTCAATGGCGTCTCAGATGGATTCGAGGCCGATAGCTCTATGTTTGGAATTCAACGGAGTGACGAGGAAATGAGGGTCGGCTTAGTTTTTGAAGAACATGTTGTGGGGAATTCAGTTCCGGTGGTTGAGGGAGCGACGGAGGTTTCTGATGGTGCTGGAGTTGTGTGGGGGAGGACCAATTCGGAAATTGAGGTGGATCGACCGGCTAGTCCCAGCAGCAGTGGGTATGCAGGTGAAAGAGGAAGCAGCAGTGCTAGTAGCGGGAGGTCGGAGACGGATGGAGTTGCTGAGGATGAGATACAGGAACTGAGAGATGACGCTTCTGTTGGTGAGAATTCGAATTCTGTACCCTCGTGGGTTCCTGGAAAGCGGCATGGTGATGAGGTACTGTGATTTATCTACTTGTTGACGACTGTTTGATTGGAGAATTTTGAACTCCATGCCTCTCATTGTCTTTAGAGTAGATCATGAATGGATATTGATCTTTGTGACATGCTTGGTAACTGTTTCCATGATATGTTTGGTTAGAAGGGACATTGTCTCTGATTCTTGTGAGGAGGGTGGGCTGGGTTTAAGGAAATTTGAGGCTTAGAAATTTGGCTCTTCTAGCTACATGGCTATGGTGGTTCCTTCTAGAATTGAATACTTTCTAGTGAAAGGTTATAGTGAGAAAATATGGGTGACATTATGTTGGGGTGGGTCTTCGCTTGTGTGGTTAAATGGACCTTGAGGAACTTGCTGAAAGAAATCTCTTTGGGTCGCCCTTGTTTTTCCAAGTGAGAAATTTTCCATCGTGGATGGGCTACTCGTTCAGTTTTTGGAAGACTGTTGTTTAGGTCCTTCATGTTCTCTTTTCCCTTGTCTTTTTCATCTTTCTTTTTGTAGTACGCTTTTGTAGACTTTATTCTTTCTTTATATATAGATTCCACCTCATGCAACTTTGATCTTAGGAGACCATTCTTTAAATGGGAAAGTTTTAATGTATCTTCTTTGTTTTCTCTTCTTCATGGGTTAAGCCATTGCCCTAGGTTTAGGAGTACCTTTGTATGGAACTATGACCCTCTATCTTGTGCAGATCATTTTTGTCTTAGTCAAGTGCCTTTCATTTCCATACGTTTCTCTTCTATTCCCTTGATTGGAGGGTATAAACCAAGTTAAAAAATTTGGTGGATTAGCACAACTTTAACCAAAGGTCTTCCTCACTAATGTTAGACTCTTCACTCTTGGTAGTGCATTTTGTGAAAATGTGTTTAAAGAAGATTTGGACCACGTGCTGTACAACAATAGTAGTTAATTTGCAATTTTGATTTAGGACAGCTTAAAGTGTAGCAGATGATGATGTATTTCTTCATCTGCCATTTCAGGATAAGAGAAGAATGCTCTGTCATGTTACTTTTTTGGGGATAATTTAGCTTGAGAGAAACAAGAAAATCTTTAGAAGGGTTGATGGATCTTCGGGTAGGTGTTGTTCCAATTCACTTTGTAATAATTGATAGTCTTTGTTTTTCTTATGTTGGCCCCCTTTCATTGTGGGCTTCGTTTGTCAGGGTTTCTTTATTGTTCTTTTAATCATTTCAGTGAATGTTTTCTCAATAAAGAAAGGGAATGGCCGCTTTAAGTCCTATTAGCAAATATTTTAAATGGGTTGGTGGCCAAGTGTATAGCTGAAAAGAATGCCTTTTACCTCCTTTGCATCAATCCTCTCTGATTTAAGAGTTGTAAGATTTCATCCTTTCTCAATGAAAGTTGTTGATTTCATCAAAAAGAAAAAAAAAAGATTTAGTTGGTTTCATTTACACTAGCATAATACGATTCCCTCCTTGTTAAAAGTCGTGAAGCTTCATCAAAATAATCGATAACCTTGGCTATAATCATGATATTATTTCTTGGCATGCTAGTTTTTTTGCTATCTTGAGGGGAATTGTTTAGTGTTGTCTTTCATGGATGAGGAATAAATTGCTTAGTTATTTCACTTCTGCATGCTCCCTTATTATTATTATCATTTATCATTATCTTTCTTTTTGTTGACTTACACATATTGTTGTGTTTTCAATACTCATTTGCATTTATTCACTTTTAGACTCTAGATAACTACCTGTTTGAACCTAACTTGATGCACTTGAATTTCAAGTCATTGAGTTTGCTAGCATATTGTTAGACCTCTAGTACTTTATACTTATGCAAGGAGGGTTAGAAATGAGTGAATTTCAGTTTACTATTTTGTGTCACACGTGCAGTTGTTTATTATCTATTGCACCAAACTAATGGGTAATTAAAATTGTTTAATGTCTTGTGTTAGGTGTGCAGCTGCCTATCATTTTGTAAGGCGGTGAATGACACTATTTAGGGGTTGGGCTGTTGTATGTTGAGCACAAGTTTTTGTCCTCTCTTGGTTTAGTCTTTTGGAGAGACCACCCTCTCAAATGGTGGGAGTGTACCTAGTTTTACTTGTCAATCTATTACTGAGTATTTTTGGACAGTATCTGACACATATGTTGACTTGACTGTATGTGGCATGGAGCAATGTTTTGTTTATAGTTAAACCTAGTCATCAGTAGTTATTAGTGAAAATACAGGCTTTGAAAGTATAGCCTCTTTGACTATATCGTTCTAATTACCAAGAAAAATTATCATCACTTTTGCTTCATTGTGGTGACTGACCTATCTAACAGACATTGACTATTGTCACTACAACTTCCCTGATCAGTTAATTCTTTAATTTTAGGATGATGCTTCCATATCGTGGAGAAAAAGGAAGAAGCATTTCTTTGTTTTGAGCCATTCGGGAAAGCCTATTTACTCCAGGTTTGTTCTTGTATAAATGAACAGTTTTATCTGTTTAAACTCCAGAGCACTATAATTTTCATCCTTCTACTGGGAGCTTATTTAAATGTAATCAATGACATCCAGGTACGGGGACGAGCACAAACTAGCAGGATTTTCAGCCAGTTTGCAGGCAATCATTTCCTTTGTGGAGGATGGGCAAGTTGCTGGACTTTGCTATGTTGTCAACGAATTTTACAATTCTTAATATTCAAAATGTCAAG ATGTCTTCTGGGTTGAGTTCACTATCATCCAGTGATGAACTCGACAATTTCAACCCTAGAACATCACCCTCTACGCCACCTAAACCTCTCGAAGAAGAATTGGCATCTCTAGCATTGACCTTACCACATCCCCAGCTCCTCTCTGACCAAGATGATGTCAATGGCGTCTCAGATGGATTCGAGGCCGATAGCTCTATGTTTGGAATTCAACGGAGTGACGAGGAAATGAGGGTCGGCTTAGTTTTTGAAGAACATGTTGTGGGGAATTCAGTTCCGGTGGTTGAGGGAGCGACGGAGGTTTCTGATGGTGCTGGAGTTGTGTGGGGGAGGACCAATTCGGAAATTGAGGTGGATCGACCGGCTAGTCCCAGCAGCAGTGGGTATGCAGGTGAAAGAGGAAGCAGCAGTGCTAGTAGCGGGAGGTCGGAGACGGATGGAGTTGCTGAGGATGAGATACAGGAACTGAGAGATGACGCTTCTGTTGGTGAGAATTCGAATTCTGTACCCTCGTGGGTTCCTGGAAAGCGGCATGGTGATGAGGATGATGCTTCCATATCGTGGAGAAAAAGGAAGAAGCATTTCTTTGTTTTGAGCCATTCGGGAAAGCCTATTTACTCCAGGTACGGGGACGAGCACAAACTAGCAGGATTTTCAGCCAGTTTGCAGGCAATCATTTCCTTTGTGGAGGATGGGCAAGTTGCTGGACTTTGCTATGTTGTCAACGAATTTTACAATTCTTAA ATGTCTTCTGGGTTGAGTTCACTATCATCCAGTGATGAACTCGACAATTTCAACCCTAGAACATCACCCTCTACGCCACCTAAACCTCTCGAAGAAGAATTGGCATCTCTAGCATTGACCTTACCACATCCCCAGCTCCTCTCTGACCAAGATGATGTCAATGGCGTCTCAGATGGATTCGAGGCCGATAGCTCTATGTTTGGAATTCAACGGAGTGACGAGGAAATGAGGGTCGGCTTAGTTTTTGAAGAACATGTTGTGGGGAATTCAGTTCCGGTGGTTGAGGGAGCGACGGAGGTTTCTGATGGTGCTGGAGTTGTGTGGGGGAGGACCAATTCGGAAATTGAGGTGGATCGACCGGCTAGTCCCAGCAGCAGTGGGTATGCAGGTGAAAGAGGAAGCAGCAGTGCTAGTAGCGGGAGGTCGGAGACGGATGGAGTTGCTGAGGATGAGATACAGGAACTGAGAGATGACGCTTCTGTTGGTGAGAATTCGAATTCTGTACCCTCGTGGGTTCCTGGAAAGCGGCATGGTGATGAGGATGATGCTTCCATATCGTGGAGAAAAAGGAAGAAGCATTTCTTTGTTTTGAGCCATTCGGGAAAGCCTATTTACTCCAGGTACGGGGACGAGCACAAACTAGCAGGATTTTCAGCCAGTTTGCAGGCAATCATTTCCTTTGTGGAGGATGGGCAAGTTGCTGGACTTTGCTATGTTGTCAACGAATTTTACAATTCTTAA
BLAST of CSPI01G13870 vs. Swiss-Prot
Match: SAND_TAKRU (Protein SAND OS=Takifugu rubripes GN=sand PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09 Identity = 39/99 (39.39%), Postives = 54/99 (54.55%), Query Frame = 1
BLAST of CSPI01G13870 vs. Swiss-Prot
Match: MON1A_MOUSE (Vacuolar fusion protein MON1 homolog A OS=Mus musculus GN=Mon1a PE=1 SV=3) HSP 1 Score: 60.1 bits (144), Expect = 4.0e-08 Identity = 38/105 (36.19%), Postives = 57/105 (54.29%), Query Frame = 1
BLAST of CSPI01G13870 vs. Swiss-Prot
Match: MON1A_HUMAN (Vacuolar fusion protein MON1 homolog A OS=Homo sapiens GN=MON1A PE=1 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 5.2e-08 Identity = 49/144 (34.03%), Postives = 70/144 (48.61%), Query Frame = 1
BLAST of CSPI01G13870 vs. Swiss-Prot
Match: MON1A_MACFA (Vacuolar fusion protein MON1 homolog A OS=Macaca fascicularis GN=MON1A PE=2 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 8.9e-08 Identity = 49/149 (32.89%), Postives = 72/149 (48.32%), Query Frame = 1
BLAST of CSPI01G13870 vs. Swiss-Prot
Match: MON1A_BOVIN (Vacuolar fusion protein MON1 homolog A OS=Bos taurus GN=MON1A PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.4e-07 Identity = 45/142 (31.69%), Postives = 68/142 (47.89%), Query Frame = 1
BLAST of CSPI01G13870 vs. TrEMBL
Match: A0A0A0LVI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132080 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 5.4e-121 Identity = 230/231 (99.57%), Postives = 230/231 (99.57%), Query Frame = 1
BLAST of CSPI01G13870 vs. TrEMBL
Match: W9RV66_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007648 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.6e-48 Identity = 132/237 (55.70%), Postives = 157/237 (66.24%), Query Frame = 1
BLAST of CSPI01G13870 vs. TrEMBL
Match: D7SKY8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02820 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 3.1e-47 Identity = 133/234 (56.84%), Postives = 158/234 (67.52%), Query Frame = 1
BLAST of CSPI01G13870 vs. TrEMBL
Match: A0A067L9X7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05515 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 9.2e-44 Identity = 116/227 (51.10%), Postives = 147/227 (64.76%), Query Frame = 1
BLAST of CSPI01G13870 vs. TrEMBL
Match: B9T841_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0388030 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.6e-40 Identity = 105/209 (50.24%), Postives = 134/209 (64.11%), Query Frame = 1
BLAST of CSPI01G13870 vs. TAIR10
Match: AT2G28390.1 (AT2G28390.1 SAND family protein) HSP 1 Score: 157.5 bits (397), Expect = 1.0e-38 Identity = 107/232 (46.12%), Postives = 135/232 (58.19%), Query Frame = 1
BLAST of CSPI01G13870 vs. NCBI nr
Match: gi|449443365|ref|XP_004139448.1| (PREDICTED: protein SAND [Cucumis sativus]) HSP 1 Score: 441.8 bits (1135), Expect = 7.8e-121 Identity = 230/231 (99.57%), Postives = 230/231 (99.57%), Query Frame = 1
BLAST of CSPI01G13870 vs. NCBI nr
Match: gi|700209751|gb|KGN64847.1| (hypothetical protein Csa_1G132080 [Cucumis sativus]) HSP 1 Score: 441.8 bits (1135), Expect = 7.8e-121 Identity = 230/231 (99.57%), Postives = 230/231 (99.57%), Query Frame = 1
BLAST of CSPI01G13870 vs. NCBI nr
Match: gi|659071909|ref|XP_008462534.1| (PREDICTED: protein SAND [Cucumis melo]) HSP 1 Score: 423.7 bits (1088), Expect = 2.2e-115 Identity = 221/231 (95.67%), Postives = 224/231 (96.97%), Query Frame = 1
BLAST of CSPI01G13870 vs. NCBI nr
Match: gi|1009115816|ref|XP_015874434.1| (PREDICTED: protein SAND [Ziziphus jujuba]) HSP 1 Score: 205.7 bits (522), Expect = 9.4e-50 Identity = 134/241 (55.60%), Postives = 161/241 (66.80%), Query Frame = 1
BLAST of CSPI01G13870 vs. NCBI nr
Match: gi|658028640|ref|XP_008349751.1| (PREDICTED: protein SAND-like isoform X1 [Malus domestica]) HSP 1 Score: 203.0 bits (515), Expect = 6.1e-49 Identity = 126/231 (54.55%), Postives = 148/231 (64.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|