ClCG10G017430.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTCCCTTAATTCTTCTTCACTTCAAGTTTTGCCTTCGCCTTCATCTTCAAGCTTAAGATTAGTGAAATTCAAAGCTATTTTGCAGACTCTCATTCTTTCTCTGGCCAGAGCTATCTCCCGAGCCAAAACCACGGCGCTTCACATCTTAAAACAAGCCAATTATCAATCCGCCATAGCTTTGAAGAGGAACAAGAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTCACTCCCGCAGTGCTCACCTGGGACCATGAATACTCCGGCGCCGGCGCCGGTGGCGACCAGCTTCGTGGGTATTTGCAGTGGCTGGAGGAAAGAGATATTAATAAGATTAAAGATGAAGATGAAGATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAAGGTGTCACGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACATGATGGCTAGAAGCTTTTGA ATGGGTTCCCTTAATTCTTCTTCACTTCAAGTTTTGCCTTCGCCTTCATCTTCAAGCTTAAGATTAGTGAAATTCAAAGCTATTTTGCAGACTCTCATTCTTTCTCTGGCCAGAGCTATCTCCCGAGCCAAAACCACGGCGCTTCACATCTTAAAACAAGCCAATTATCAATCCGCCATAGCTTTGAAGAGGAACAAGAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTCACTCCCGCAGTGCTCACCTGGGACCATGAATACTCCGGCGCCGGCGCCGGTGGCGACCAGCTTCGTGGGTATTTGCAGTGGCTGGAGGAAAGAGATATTAATAAGATTAAAGATGAAGATGAAGATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAAGGTGTCACGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACATGATGGCTAGAAGCTTTTGA ATGGGTTCCCTTAATTCTTCTTCACTTCAAGTTTTGCCTTCGCCTTCATCTTCAAGCTTAAGATTAGTGAAATTCAAAGCTATTTTGCAGACTCTCATTCTTTCTCTGGCCAGAGCTATCTCCCGAGCCAAAACCACGGCGCTTCACATCTTAAAACAAGCCAATTATCAATCCGCCATAGCTTTGAAGAGGAACAAGAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTCACTCCCGCAGTGCTCACCTGGGACCATGAATACTCCGGCGCCGGCGCCGGTGGCGACCAGCTTCGTGGGTATTTGCAGTGGCTGGAGGAAAGAGATATTAATAAGATTAAAGATGAAGATGAAGATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAAGGTGTCACGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACATGATGGCTAGAAGCTTTTGA MGSLNSSSLQVLPSPSSSSLRLVKFKAILQTLILSLARAISRAKTTALHILKQANYQSAIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAGAGGDQLRGYLQWLEERDINKIKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF
BLAST of ClCG10G017430.1 vs. TrEMBL
Match: A0A0A0LBV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809400 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 4.5e-66 Identity = 142/180 (78.89%), Postives = 151/180 (83.89%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. TrEMBL
Match: A0A0A0KP26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523130 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 2.7e-34 Identity = 96/193 (49.74%), Postives = 116/193 (60.10%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. TrEMBL
Match: A0A067JKV5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25527 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.8e-30 Identity = 83/178 (46.63%), Postives = 109/178 (61.24%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. TrEMBL
Match: A0A0D2QHA8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G225600 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.8e-30 Identity = 90/183 (49.18%), Postives = 110/183 (60.11%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. TrEMBL
Match: C6T4N8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.2e-30 Identity = 89/190 (46.84%), Postives = 113/190 (59.47%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. TAIR10
Match: AT3G57950.1 (AT3G57950.1 unknown protein) HSP 1 Score: 112.1 bits (279), Expect = 3.5e-25 Identity = 76/186 (40.86%), Postives = 100/186 (53.76%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. TAIR10
Match: AT5G06790.1 (AT5G06790.1 unknown protein) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-24 Identity = 83/211 (39.34%), Postives = 108/211 (51.18%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. TAIR10
Match: AT2G42180.1 (AT2G42180.1 unknown protein) HSP 1 Score: 84.3 bits (207), Expect = 7.7e-17 Identity = 69/175 (39.43%), Postives = 85/175 (48.57%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. NCBI nr
Match: gi|700204180|gb|KGN59313.1| (hypothetical protein Csa_3G809400 [Cucumis sativus]) HSP 1 Score: 258.8 bits (660), Expect = 6.5e-66 Identity = 142/180 (78.89%), Postives = 151/180 (83.89%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. NCBI nr
Match: gi|659085786|ref|XP_008443602.1| (PREDICTED: uncharacterized protein LOC103487158 [Cucumis melo]) HSP 1 Score: 258.5 bits (659), Expect = 8.5e-66 Identity = 142/181 (78.45%), Postives = 152/181 (83.98%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. NCBI nr
Match: gi|778703677|ref|XP_011655408.1| (PREDICTED: uncharacterized protein LOC105435523 [Cucumis sativus]) HSP 1 Score: 153.3 bits (386), Expect = 3.8e-34 Identity = 96/193 (49.74%), Postives = 116/193 (60.10%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. NCBI nr
Match: gi|659117803|ref|XP_008458796.1| (PREDICTED: uncharacterized protein LOC103498096 [Cucumis melo]) HSP 1 Score: 148.7 bits (374), Expect = 9.5e-33 Identity = 95/194 (48.97%), Postives = 115/194 (59.28%), Query Frame = 1
BLAST of ClCG10G017430.1 vs. NCBI nr
Match: gi|802750473|ref|XP_012087802.1| (PREDICTED: uncharacterized protein LOC105646548 [Jatropha curcas]) HSP 1 Score: 140.6 bits (353), Expect = 2.6e-30 Identity = 83/178 (46.63%), Postives = 109/178 (61.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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