ClCG06G003930.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGATCTTCATCCTCGAAAGCATCCATCGTTTTTTGAGAGCAAGTTCTGTACTCACTAAACTTGGTGAAGAGACAGCCCACTTAGAATTTTCCGGGTTGATGTTCAACTTCATAGTTGTTTCCTACACAAATTCCCATCATTTCTTTGTAGTACTAAGGATTAAACCTCCATTCTTCTTCTATTACCAACCTTCATTTATTCCTCTGCTTTTCGATTATTGGAGGATTCAACTGAAGGAATTTTGCGATCATCTCAGACACGGCATAGATTCTTCTTCAATGGACTTGTATCTTTCTGACGACAAACCACCATTTGCAACCCTCACATTTCATGATTATGGTAACTATATCTCAATTTCTTGCTATATCTTCCCCATTAATGATCCATACGACTCTTGAAAGTGTTTCTTGTCCATTTTGTAACCATTTAGTTTTCATCATAAGTTTCTATGTTTTCTTATTTTTACTTCAATTTCTAATAGGAATTATATTATATTATAATAGAATTTAATAGGAATTCATGTGTTTCTTTACCAAATTATATTATAATGACATCCATAATTGAGAAATTGAAAAAAGAAAAACCAATGTAAATTTCAAAAAAAAAAAAAAAAATTGAAATGGTTATCAAACAAATCTTTTAACCCTAAATTGAAATTACTATCTATTTAATTAGTTTCATGCATTTTGAACTTGATTTGACATGAATTAAATTGAGTAATAGGTACTTCTGAGCATTTTATGGCGCCCTTCTCTCGTATGATAAGGTTGTCATATCCAGAAAATAAAGAGAATGTAGACAAAATTAACTATGCAACCTTTGTCTCAATCGATTCGCAACAGTTCAGATGCATTGTAATGAAGTGTAGAAATAGTAATAAAGGTAATAATACATAATTCATCTCTTCTTTTTTACTTTAAAAGATAAGAAAAACAAAGGGATATTGAAGTTCTTACATATACTCCTTGTCATTTGTTATACAGTTGATGTTAGTTTGAGTACTTTACAAGTGGCATTCTCAAGTGAAGACGAAAAGATTACCCTAAACAAAGAGGTATTGTGTGTGTGTTGATCTCCAAGAAGCTAATTAATTAAAACACCATTGTTCATTTGATGTGTGAATTATAGAAAAAATTGAGATGTTTTGTGCAGGATGGAGAATGCATAATCGGTGGTGTTCAAGTTGATGAACAAATCAACTTCTGGATCAAGCTTCGTCCCACAACATTTTTTAATGATTTGACATTTTTGGCAGAAAGGGTGTGGTTTTATGGGACAACTAAAGCCAATGTTGTAATCTATGCCCCTATTGACTTGAATGCTGGATTTGAGATTTATTTTCTGAGTTAA ATGTTGATCTTCATCCTCGAAAGCATCCATCGTTTTTTGAGAGCAAGTTCTGTACTCACTAAACTTGGTGAAGAGACAGCCCACTTAGAATTTTCCGGGTTGATGTTCAACTTCATAGTTGTTTCCTACACAAATTCCCATCATTTCTTTGTAGTACTAAGGATTAAACCTCCATTCTTCTTCTATTACCAACCTTCATTTATTCCTCTGCTTTTCGATTATTGGAGGATTCAACTGAAGGAATTTTGCGATCATCTCAGACACGGCATAGATTCTTCTTCAATGGACTTGTATCTTTCTGACGACAAACCACCATTTGCAACCCTCACATTTCATGATTATGGTACTTCTGAGCATTTTATGGCGCCCTTCTCTCGTATGATAAGGTTGTCATATCCAGAAAATAAAGAGAATGTAGACAAAATTAACTATGCAACCTTTGTCTCAATCGATTCGCAACAGTTCAGATGCATTGTAATGAAGTGTAGAAATAGTAATAAAGTTGATGTTAGTTTGAGTACTTTACAAGTGGCATTCTCAAGTGAAGACGAAAAGATTACCCTAAACAAAGAGGATGGAGAATGCATAATCGGTGGTGTTCAAGTTGATGAACAAATCAACTTCTGGATCAAGCTTCGTCCCACAACATTTTTTAATGATTTGACATTTTTGGCAGAAAGGGTGTGGTTTTATGGGACAACTAAAGCCAATGTTGTAATCTATGCCCCTATTGACTTGAATGCTGGATTTGAGATTTATTTTCTGAGTTAA ATGTTGATCTTCATCCTCGAAAGCATCCATCGTTTTTTGAGAGCAAGTTCTGTACTCACTAAACTTGGTGAAGAGACAGCCCACTTAGAATTTTCCGGGTTGATGTTCAACTTCATAGTTGTTTCCTACACAAATTCCCATCATTTCTTTGTAGTACTAAGGATTAAACCTCCATTCTTCTTCTATTACCAACCTTCATTTATTCCTCTGCTTTTCGATTATTGGAGGATTCAACTGAAGGAATTTTGCGATCATCTCAGACACGGCATAGATTCTTCTTCAATGGACTTGTATCTTTCTGACGACAAACCACCATTTGCAACCCTCACATTTCATGATTATGGTACTTCTGAGCATTTTATGGCGCCCTTCTCTCGTATGATAAGGTTGTCATATCCAGAAAATAAAGAGAATGTAGACAAAATTAACTATGCAACCTTTGTCTCAATCGATTCGCAACAGTTCAGATGCATTGTAATGAAGTGTAGAAATAGTAATAAAGTTGATGTTAGTTTGAGTACTTTACAAGTGGCATTCTCAAGTGAAGACGAAAAGATTACCCTAAACAAAGAGGATGGAGAATGCATAATCGGTGGTGTTCAAGTTGATGAACAAATCAACTTCTGGATCAAGCTTCGTCCCACAACATTTTTTAATGATTTGACATTTTTGGCAGAAAGGGTGTGGTTTTATGGGACAACTAAAGCCAATGTTGTAATCTATGCCCCTATTGACTTGAATGCTGGATTTGAGATTTATTTTCTGAGTTAA MLIFILESIHRFLRASSVLTKLGEETAHLEFSGLMFNFIVVSYTNSHHFFVVLRIKPPFFFYYQPSFIPLLFDYWRIQLKEFCDHLRHGIDSSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSEDEKITLNKEDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFYGTTKANVVIYAPIDLNAGFEIYFLS
BLAST of ClCG06G003930.1 vs. TrEMBL
Match: A0A0A0K7E3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002340 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.1e-30 Identity = 98/249 (39.36%), Postives = 133/249 (53.41%), Query Frame = 1
BLAST of ClCG06G003930.1 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 5.8e-17 Identity = 92/263 (34.98%), Postives = 132/263 (50.19%), Query Frame = 1
BLAST of ClCG06G003930.1 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 8.4e-16 Identity = 78/258 (30.23%), Postives = 128/258 (49.61%), Query Frame = 1
BLAST of ClCG06G003930.1 vs. TrEMBL
Match: A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.1e-14 Identity = 48/122 (39.34%), Postives = 73/122 (59.84%), Query Frame = 1
BLAST of ClCG06G003930.1 vs. TrEMBL
Match: A0A0A0LLD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G154090 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13 Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 1
BLAST of ClCG06G003930.1 vs. NCBI nr
Match: gi|659116798|ref|XP_008458265.1| (PREDICTED: uncharacterized protein LOC103497733 [Cucumis melo]) HSP 1 Score: 193.0 bits (489), Expect = 6.6e-46 Identity = 127/260 (48.85%), Postives = 159/260 (61.15%), Query Frame = 1
BLAST of ClCG06G003930.1 vs. NCBI nr
Match: gi|659116800|ref|XP_008458266.1| (PREDICTED: uncharacterized protein LOC103497734 isoform X1 [Cucumis melo]) HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43 Identity = 112/256 (43.75%), Postives = 157/256 (61.33%), Query Frame = 1
BLAST of ClCG06G003930.1 vs. NCBI nr
Match: gi|700190436|gb|KGN45640.1| (hypothetical protein Csa_6G002340 [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 3.0e-30 Identity = 98/249 (39.36%), Postives = 133/249 (53.41%), Query Frame = 1
BLAST of ClCG06G003930.1 vs. NCBI nr
Match: gi|659117581|ref|XP_008458677.1| (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]) HSP 1 Score: 103.2 bits (256), Expect = 6.8e-19 Identity = 87/258 (33.72%), Postives = 133/258 (51.55%), Query Frame = 1
BLAST of ClCG06G003930.1 vs. NCBI nr
Match: gi|700190431|gb|KGN45635.1| (hypothetical protein Csa_6G002300 [Cucumis sativus]) HSP 1 Score: 96.3 bits (238), Expect = 8.3e-17 Identity = 92/263 (34.98%), Postives = 132/263 (50.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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