ClCG06G003910.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACTCAAGATTGAGAACATGGATCGTTTTTCAAATGCAATTTTCCCACTCATTCGATTCCATGACACAGCCGATTTGAAATGCTCACCAACAATGTTCTCTTTAATAGTCTCTCGTCATTTCCCTCATATCATTACATCTCTCCAAACTATGCCTCCTTTCTTCACCAATTTCCTTTGCCAACACCAAATTTACCAATGCCAAATTCCCATCAAACTCTTTCACAATACCATCCTCACTATGAAACACGCCTTTTATTCCTCAATGACTCTCTCTCTCGAACAACCTCTTAATCGCATCTCCCTTCAATTTCACAACTCAAGTGAGTAACTCTCGTTATTATTCATCTCTTTTATTCAATTCTTGTCAAGAAAACAAGAATGTTATTTGTTTCTTGCAAACTCTTTAATTAGGGTTTCATCTTTTTTTTTTTTTTTCCATTTATAATTTTTAGGGGTTGATCAGCAATTGTTTAGCGAATTGCCATTGCTACCTTCAAGAGAGGAAGATGTAGGCCAAATTGACTATGGAATCTTTGTATCAATTGATTCACCAGTGTTTAAACGCATTGCAACAGAGTTAGATGATTTCAATGGTGATATATATATATATCTAATTCAAATAATTTACAATTTTTCAAATAAAATTTTCTTTTTTTAATTAAGTTTCTAAAATCTTGTGGTAATTTGTCTCAGCATTGGTTACCCTAACGAATTCACAAGCCAAATTCACTGTTGAAGGTAGAGACATAAGTCTTCACGAAGAGGTATAATAATTAGTTATTTAGTTTTCATTATTAATAATACATTTGATAAGTAGTTGATAATTATGTTTTGTGCAGACAAAGGAATGCATAATTGGAGGTCTTGCAAAGGGAGAAGAAATTCGATTCTTTGTGTACTTAAATCCCATAATTTTTTTTCGTGATTTGGCAAATCAGTCAAAAAGGATATGGTTATTCAAGTCACCTAATTCCTTTAGTATAATTGTTGCTCCTATTGGATTGTATGCTCAATTTTGTGTCTATTTTCCACAAAGAGGAAAATTCCAAGACTCAAAAATGTTTAAGATATGTTGA ATGGAACTCAAGATTGAGAACATGGATCGTTTTTCAAATGCAATTTTCCCACTCATTCGATTCCATGACACAGCCGATTTGAAATGCTCACCAACAATGTTCTCTTTAATAGTCTCTCGTCATTTCCCTCATATCATTACATCTCTCCAAACTATGCCTCCTTTCTTCACCAATTTCCTTTGCCAACACCAAATTTACCAATGCCAAATTCCCATCAAACTCTTTCACAATACCATCCTCACTATGAAACACGCCTTTTATTCCTCAATGACTCTCTCTCTCGAACAACCTCTTAATCGCATCTCCCTTCAATTTCACAACTCAAGGGTTGATCAGCAATTGTTTAGCGAATTGCCATTGCTACCTTCAAGAGAGGAAGATGTAGGCCAAATTGACTATGGAATCTTTGTATCAATTGATTCACCAGTGTTTAAACGCATTGCAACAGAGTTAGATGATTTCAATGCATTGGTTACCCTAACGAATTCACAAGCCAAATTCACTGTTGAAGGTAGAGACATAAGTCTTCACGAAGAGACAAAGGAATGCATAATTGGAGGTCTTGCAAAGGGAGAAGAAATTCGATTCTTTGTGTACTTAAATCCCATAATTTTTTTTCGTGATTTGGCAAATCAGTCAAAAAGGATATGGTTATTCAAGTCACCTAATTCCTTTAGTATAATTGTTGCTCCTATTGGATTGTATGCTCAATTTTGTGTCTATTTTCCACAAAGAGGAAAATTCCAAGACTCAAAAATGTTTAAGATATGTTGA ATGGAACTCAAGATTGAGAACATGGATCGTTTTTCAAATGCAATTTTCCCACTCATTCGATTCCATGACACAGCCGATTTGAAATGCTCACCAACAATGTTCTCTTTAATAGTCTCTCGTCATTTCCCTCATATCATTACATCTCTCCAAACTATGCCTCCTTTCTTCACCAATTTCCTTTGCCAACACCAAATTTACCAATGCCAAATTCCCATCAAACTCTTTCACAATACCATCCTCACTATGAAACACGCCTTTTATTCCTCAATGACTCTCTCTCTCGAACAACCTCTTAATCGCATCTCCCTTCAATTTCACAACTCAAGGGTTGATCAGCAATTGTTTAGCGAATTGCCATTGCTACCTTCAAGAGAGGAAGATGTAGGCCAAATTGACTATGGAATCTTTGTATCAATTGATTCACCAGTGTTTAAACGCATTGCAACAGAGTTAGATGATTTCAATGCATTGGTTACCCTAACGAATTCACAAGCCAAATTCACTGTTGAAGGTAGAGACATAAGTCTTCACGAAGAGACAAAGGAATGCATAATTGGAGGTCTTGCAAAGGGAGAAGAAATTCGATTCTTTGTGTACTTAAATCCCATAATTTTTTTTCGTGATTTGGCAAATCAGTCAAAAAGGATATGGTTATTCAAGTCACCTAATTCCTTTAGTATAATTGTTGCTCCTATTGGATTGTATGCTCAATTTTGTGTCTATTTTCCACAAAGAGGAAAATTCCAAGACTCAAAAATGTTTAAGATATGTTGA MELKIENMDRFSNAIFPLIRFHDTADLKCSPTMFSLIVSRHFPHIITSLQTMPPFFTNFLCQHQIYQCQIPIKLFHNTILTMKHAFYSSMTLSLEQPLNRISLQFHNSRVDQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRGKFQDSKMFKIC
BLAST of ClCG06G003910.1 vs. TrEMBL
Match: A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.0e-53 Identity = 115/166 (69.28%), Postives = 134/166 (80.72%), Query Frame = 1
BLAST of ClCG06G003910.1 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.3e-37 Identity = 90/240 (37.50%), Postives = 146/240 (60.83%), Query Frame = 1
BLAST of ClCG06G003910.1 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 9.3e-31 Identity = 80/246 (32.52%), Postives = 135/246 (54.88%), Query Frame = 1
BLAST of ClCG06G003910.1 vs. TrEMBL
Match: A0A0A0LLD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G154090 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.9e-21 Identity = 58/155 (37.42%), Postives = 94/155 (60.65%), Query Frame = 1
BLAST of ClCG06G003910.1 vs. TrEMBL
Match: A0A0A0KNE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G469020 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.1e-20 Identity = 53/126 (42.06%), Postives = 83/126 (65.87%), Query Frame = 1
BLAST of ClCG06G003910.1 vs. NCBI nr
Match: gi|659117581|ref|XP_008458677.1| (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]) HSP 1 Score: 339.0 bits (868), Expect = 7.4e-90 Identity = 177/262 (67.56%), Postives = 209/262 (79.77%), Query Frame = 1
BLAST of ClCG06G003910.1 vs. NCBI nr
Match: gi|700190437|gb|KGN45641.1| (hypothetical protein Csa_6G002350 [Cucumis sativus]) HSP 1 Score: 218.4 bits (555), Expect = 1.5e-53 Identity = 115/166 (69.28%), Postives = 134/166 (80.72%), Query Frame = 1
BLAST of ClCG06G003910.1 vs. NCBI nr
Match: gi|700190431|gb|KGN45635.1| (hypothetical protein Csa_6G002300 [Cucumis sativus]) HSP 1 Score: 164.9 bits (416), Expect = 1.9e-37 Identity = 90/240 (37.50%), Postives = 146/240 (60.83%), Query Frame = 1
BLAST of ClCG06G003910.1 vs. NCBI nr
Match: gi|659114864|ref|XP_008457262.1| (PREDICTED: uncharacterized protein LOC103496987 [Cucumis melo]) HSP 1 Score: 159.5 bits (402), Expect = 8.1e-36 Identity = 86/240 (35.83%), Postives = 143/240 (59.58%), Query Frame = 1
BLAST of ClCG06G003910.1 vs. NCBI nr
Match: gi|778674138|ref|XP_011650141.1| (PREDICTED: uncharacterized protein LOC101209763 [Cucumis sativus]) HSP 1 Score: 149.8 bits (377), Expect = 6.4e-33 Identity = 80/226 (35.40%), Postives = 135/226 (59.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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