ClCG02G002330.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG02G002330.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr02 : 2397640 .. 2400565 (+)
Sequence length756
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATACCCACATCTCAATTCCACTCACTCCTCTTGTTTCGAGTTTAGGAACGGCATCTTTATTCCAAAATTAACCTTCCATCAAAACCTAATTTCATTGTTCTTCAATGGGAGGGAATGGTTAAGACATTTAGGTCTCTTCTTCTTCTACCCTCTTATTATTTTTCTCTTACTTGTCGTGATTCTCTCCGTTTTCCCCCCCTTTTTTGGGTATTGAATGGATTCAATGGGTGAGAGATTGAGGACTGTGTGGTGGTACTAGTAACTTGGATTTAGCAGAAGAATTGGAGCTTTGTGTTGTCGACAATGGATGGTAAGATTGATGGTTGGTTTCATTTTCTTCTTTTACATTTTTTTGTAATGATCAAACAACCCATGATTTCAGTTGTTCTTTAGGAATTTTGGATTATCTGTTTAAGAGTCATTTGGGTTTACTGCTGTTTAAGAGTCATTTGGATTATCTGTTTAGGAAAGGAGATCATATTTTACCTGTTGATCCTAAAAGTGAACTCGATAGATTTAATGTCTAAGCTCTGAAATAGAAGCAATTACCGTGACTTTTTCTAAAATCACTTGAACACTGCTTTTTAATCATTCAAAATCCATTTTAATAAGAGTGTAATGTTAAACATTGAATTGATCCGGAATAATTAAATGGATGTTTCTTAAACATGACAAAAGTATTATGACTAGGCATCAATTGGCTCCTGAAACTGTTAAATTTGCAGCTTTCCAATATCCCTTCTCTTGAAGGAAGCAAAGGCCTCAATATAGTATTAGTTGCAAATAAAATTCAGGTACTTGGTGTATTGTAAATGTTTGAACTTTATCATTTCTAATGTTTACTCTGTCAATTTGCTGTTTGTTTTCAAGCAATCTGGAATTCGGGATCTCACAATAAGTAGGATGCCAGAAGCTTCTATTGTCTGAAATTTGCACGTGGTCAAAATCAAGAAGATTCAACTTCTGATGAAGATGATCATGGTGAAGCTTAATGGACTGTTCATCAATTGCAGTAGCCATATCTTGGAAAAGATAAAATGCCTTCAGTCCTTTTGTTTCTTTCATCTTATAGATTCCATGTTCTACAGGAGCGTTTAGAGGCTGCAAATGGTTTGAAGAAGCAAATTCTGGCAGAGGCGCAAGAGTATGTTAGGTCTGGGAATGGCAGAATTTGTGTTGAGTTATGATGGATCTTGGAGGCTTATCAATTCTGTTTGTGTCATCCTTGCGCAAGGGCCATGCTAATCTTCTTTGTGTCATTCCAATTTTATCGGGTGTCCTCGAAGGGACTGAGACTTATCGATTCTGCTGAGGTGTTTTCCGCTACATTTGATCTGTATTGGGGAAGTCGTTGAGAAAGTTCTCTTACATTTTTTAGGTTAAAGACTGTGTAATACCTCTGATTTATATTTTTATGAACACATGGCTCAACTTGTAGAGAACAATGGTCTGTCTTGGTGTTCATCTTCACCCTTGAGGATTAGATTGCTTAATATGTTGTTAACTTTGATTGAGGTGAGTTTTCCTTTAGCCGTATTGTAGCTTAAAACATTTATGTAGACTTTGTATTTAGTATCTGGTGCATAGGTTTCCATTCCAGGGGAAGCTTTCCAACTTCCAAAGAAAAACTTGGGGCTCAAAACTTCTGGCTTCATCATCTACTGAGGACCTTCTTCAGGTAGCCTAAGGACTAAATTGAAACCAAATTCAAAATATAAGGCCTAAATGTGTAACTTTTGGAACCTAGGGACCAAATAAAAACTAAACCTACATAAACCCTTATCCTTCACCACCCATGGATTGTCCAACCAATCACAACCCGGATTCTTCCACAAACAAACAACTATGTGCCTCCATCTAATACCAAGAAAACTATCTTCTGACCCGGTAAAAAGCATTCCACCGCCATTATTGCTCTTCCTTTTGATGCTGTTTCGAAAGCCTATCTTTCTAGCCCCATGCCTTACTCGCCACACTCTCTTAATGAACATCCCGAAGACAATTGGTATGATTTCATCCCTCGAGCAAGTTTAGATTCTTTCAATCCTACTCTCATTTGATGGCATTGGCTCATGTTTGGTTTATGCATAAAGGCGATCCCAGCTCACAAGCATCCAAACAGATTATCTACCAAGAAAAAAAAAGAGGGTTGAGAGAACTTCGAATAAGCTAAGGAATTGATGGAAGAAGGCCATCATCAACTTGATTATGCTTTTTAACTCTGCTTTGTCGATTTGAAAGGGGTTGATCGGACCTGTTCTTTATGGCTATCATTTGCGTTTCCTTGCCACCTTTGTTTCAGGGGCCCTCTGCTATCTTGTTTTTTATTCATTTTTCCTTCTTTTTTTCGTTGTATTTGCTCTCTTCCGCTTGGGCTTCATTTGTTATTAGTATTTCTCCATTTCATACTCTTTGGATTATTTCATTCATCAATGAAATGTTTCTTATCCAAAAAAATAATAATAATAAAACAATAAAAACTAAATTGAAAACCCAAGGCCTACAAAGATATTTTTCCCTTTATTCTATGAGTTATCCTTATTCATTGTCTTGGCGTCTTGGTTCTGATACTTTTTGGTTCTATCCTTGAAGATTTACAAAATCGTTAAGGGATTTTCTCACAAGGAGTATCAGAGGTGGGAAATCACAGAAAATATTCAATGACTTGAGGGCTGTATCTGGCAAGAAAAGTACTAGCACCAACGGGAAAATATTAAGGATGAACGGGGAGGATTTAGGCATGGTCAACGGAGTGCTAGAAGCAAGCAAACATCAGCAAGGAAGATTAAGTTCAGCTCCGAGGGAAGTCATCTTGAAGAAACTATCAATGAGATGTCAGAATTAGCTCAGGACAACAGTCAAGAATGTGGTGATTACCGGAACATTAGGATGTTGCCAAAAAGTAATGAAAGTAAGCAGTTCTGA

mRNA sequence

CATACCCACATCTCAATTCCACTCACTCCTCTTGTTTCGAGTTTAGGAACGGCATCTTTATTCCAAAATTAACCTTCCATCAAAACCTAATTTCATTGTTCTTCAATGGGAGGGAATGGTTAAGACATTTAGGTCTCTTCTTCTTCTACCCTCTTATTATTTTTCTCTTACTTGTCGTGATTCTCTCCGTTTTCCCCCCCTTTTTTGGGTATTGAATGGATTCAATGGGTGAGAGATTGAGGACTGTGTGGTGGTACTAGTAACTTGGATTTAGCAGAAGAATTGGAGCTTTGTGTTGTCGACAATGGATGGAAAGGAGATCATATTTTACCTGTTGATCCTAAAAGAAGCAAAGGCCTCAATATAGTATTAGTTGCAAATAAAATTCAGGATGCCAGAAGCTTCTATTGTCTGAAATTTGCACGTGGTCAAAATCAAGAAGATTCAACTTCTGATGAAGATGATCATGGAGCGTTTAGAGGCTGCAAATGGTTTGAAGAAGCAAATTCTGGCAGAGGCGCAAGAATTTACAAAATCGTTAAGGGATTTTCTCACAAGGAGTATCAGAGGCATGGTCAACGGAGTGCTAGAAGCAAGCAAACATCAGCAAGGAAGATTAAGTTCAGCTCCGAGGGAAGTCATCTTGAAGAAACTATCAATGAGATGTCAGAATTAGCTCAGGACAACAGTCAAGAATGTGGTGATTACCGGAACATTAGGATGTTGCCAAAAAGTAATGAAAGTAAGCAGTTCTGA

Coding sequence (CDS)

ATGAAGATGATCATGGAGCGTTTAGAGGCTGCAAATGGTTTGAAGAAGCAAATTCTGGCAGAGGCGCAAGAATTTACAAAATCGTTAAGGGATTTTCTCACAAGGAGTATCAGAGGCATGGTCAACGGAGTGCTAGAAGCAAGCAAACATCAGCAAGGAAGATTAAGTTCAGCTCCGAGGGAAGTCATCTTGAAGAAACTATCAATGAGATGTCAGAATTAG

Protein sequence

MKMIMERLEAANGLKKQILAEAQEFTKSLRDFLTRSIRGMVNGVLEASKHQQGRLSSAPREVILKKLSMRCQN
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG02G002330ClCG02G002330gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG02G002330.1ClCG02G002330.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG02G002330.1.five_prime_UTR1ClCG02G002330.1.five_prime_UTR1five_prime_UTR
ClCG02G002330.1.five_prime_UTR2ClCG02G002330.1.five_prime_UTR2five_prime_UTR
ClCG02G002330.1.five_prime_UTR3ClCG02G002330.1.five_prime_UTR3five_prime_UTR
ClCG02G002330.1.five_prime_UTR4ClCG02G002330.1.five_prime_UTR4five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG02G002330.1.cds1ClCG02G002330.1.cds1CDS
ClCG02G002330.1.cds2ClCG02G002330.1.cds2CDS
ClCG02G002330.1.cds3ClCG02G002330.1.cds3CDS
ClCG02G002330.1.cds4ClCG02G002330.1.cds4CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG02G002330.1.three_prime_UTR1ClCG02G002330.1.three_prime_UTR1three_prime_UTR