ClCG02G000050.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G000050.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Trafficking protein particle complex subunit
Location	CG_Chr02 : 114487 .. 115258 (+)
Sequence length	494

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAACCCAGCCCATCTCGCGCCCCTCTCGCATCCGAGCCCAGCCCGCCCTCTCCCCTTAACTCTCTGTCATCTCACTCCACCGGAAACCTCCCGAACTGCTGCTCAGAATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATCTATGAAGCTGAAGTCGGATCTGCTGTTAAAGTATTTTCTTCTTCTTCATTTTCCATTTCTTTTCATGTTTAGGCTGAATATTTCCTTCACAAGATCGCCAATAATAGGTGATCTCGTTTTGATTCTTTAATTACTTTAGTTTTGACTGTCATTAGTCGCTCATCTTTTTGGCTTGACATGAAAGAGAGAGGATTCCGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTCGACATTGTTCAAGACCTGGCATGGACAACTAGTGCTATGTGAGTTCGTATTCCTTTTAGTTTTTTATTTAATCATCGAGACATCTCCTTTCTCTTCTTTTTCTTTTTTGTTTTTTCCTTTGAATTTCGCCTTAGATCTCTTTTCTTGTTGCGGTTTATGCAGGTTCTTGAAAGCAGTCGATAGGTTCAATGACTTGGTCGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAATGTCGAGGGGATTTGTCAAGCACACTGTGCTGGAAATTGAGTCAAATTTCATTAATTCACTCACTCGTAAAACTCAACTCCAAATTAATAAAAGTTTTATCTTTGAATCTTTTGCATCTATACAACCCGCCCCCGCCCCCCCCC

mRNA sequence

CACAAACCCAGCCCATCTCGCGCCCCTCTCGCATCCGAGCCCAGCCCGCCCTCTCCCCTTAACTCTCTGTCATCTCACTCCACCGGAAACCTCCCGAACTGCTGCTCAGAATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATCTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTCGACATTGTTCAAGACCTGGCATGGACAACTAGTGCTATGTTCTTGAAAGCAGTCGATAGGTTCAATGACTTGGTCGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAATGTCGAGGGGATTTGTCAAGCACACTGTGCTGGAAATTGAGTCAAATTTCATTAATTCACTCACTCGTAAAACTCAACTCCAAATTAATAAAAGTTTTATCTTTGAATCTTTTGCATCTATACAACCCGCCCCCGCCCCCCCCC

Coding sequence (CDS)

ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATCTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTCGACATTGTTCAAGACCTGGCATGGACAACTAGTGCTATGTTCTTGAAAGCAGTCGATAGGTTCAATGACTTGGTCGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAA

Protein sequence

MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHIL

Homology

[Close]

BLAST of ClCG02G000050.1 vs. Swiss-Prot
Match: TPC2B_HUMAN (Trafficking protein particle complex subunit 2B OS=Homo sapiens GN=TRAPPC2B PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of ClCG02G000050.1 vs. Swiss-Prot
Match: TPPC2_PONAB (Trafficking protein particle complex subunit 2 OS=Pongo abelii GN=TRAPPC2 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of ClCG02G000050.1 vs. Swiss-Prot
Match: TPPC2_PIG (Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of ClCG02G000050.1 vs. Swiss-Prot
Match: TPPC2_CANLF (Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris GN=TRAPPC2 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of ClCG02G000050.1 vs. Swiss-Prot
Match: TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of ClCG02G000050.1 vs. TrEMBL
Match: A0A0A0LQF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338800 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-35
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          VDRFNDLVVSVYVTAGHIL
Sbjct: 61 VDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of ClCG02G000050.1 vs. TrEMBL
Match: A0A067F9D4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 3.6e-34
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN IPIYEAEVGSAVKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          +DRFNDLVVSVYVTAGHIL
Sbjct: 61 IDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of ClCG02G000050.1 vs. TrEMBL
Match: A0A067FKI3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-33
Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN IPIYEAEVGSAVKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          +DRFNDLVVSVYVTAGH L
Sbjct: 61 IDRFNDLVVSVYVTAGHDL 79

[Close]

BLAST of ClCG02G000050.1 vs. TrEMBL
Match: A0A067FL79_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-33
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN IPIYEAEVGSAVKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          +DRFNDLVVSVYVTAGH
Sbjct: 61 IDRFNDLVVSVYVTAGH 77

[Close]

BLAST of ClCG02G000050.1 vs. TrEMBL
Match: A0A061EJF7_THECC (SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.8e-33
Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN+IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          +DRFNDLVVSVYVTAGH
Sbjct: 61 IDRFNDLVVSVYVTAGH 77

[Close]

BLAST of ClCG02G000050.1 vs. TAIR10
Match: AT1G80500.1 (AT1G80500.1 SNARE-like superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 8.5e-35
Identity = 69/77 (89.61%), Postives = 72/77 (93.51%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MA TACFIIV RN+IPIYEAEVGSA KRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+
Sbjct: 1  MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of ClCG02G000050.1 vs. NCBI nr
Match: gi|700207117|gb|KGN62236.1| (hypothetical protein Csa_2G338800 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-35
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          VDRFNDLVVSVYVTAGHIL
Sbjct: 61 VDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of ClCG02G000050.1 vs. NCBI nr
Match: gi|449459192|ref|XP_004147330.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of ClCG02G000050.1 vs. NCBI nr
Match: gi|641845079|gb|KDO63968.1| (hypothetical protein CISIN_1g032720mg [Citrus sinensis])

HSP 1 Score: 151.8 bits (382), Expect = 5.2e-34
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN IPIYEAEVGSAVKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          +DRFNDLVVSVYVTAGHIL
Sbjct: 61 IDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of ClCG02G000050.1 vs. NCBI nr
Match: gi|659121801|ref|XP_008460820.1| (PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo])

HSP 1 Score: 151.8 bits (382), Expect = 5.2e-34
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of ClCG02G000050.1 vs. NCBI nr
Match: gi|778670342|ref|XP_011649448.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X1 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-33
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAG 77
          VDRFNDLVVSVYVTAG
Sbjct: 61 VDRFNDLVVSVYVTAG 76

The following BLAST results are available for this feature:

BLAST of ClCG02G000050.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TPC2B_HUMAN	2.5e-12	41.98	Trafficking protein particle complex subunit 2B OS=Homo sapiens GN=TRAPPC2B PE=1...	[more]
TPPC2_PONAB	2.5e-12	41.98	Trafficking protein particle complex subunit 2 OS=Pongo abelii GN=TRAPPC2 PE=2 S...	[more]
TPPC2_PIG	2.5e-12	41.98	Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=...	[more]
TPPC2_CANLF	2.5e-12	41.98	Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris GN=TRAP...	[more]
TPPC2_BOVIN	2.5e-12	41.98	Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=...	[more]

BLAST of ClCG02G000050.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQF1_CUCSA	1.1e-35	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338800 PE=4 SV=1	[more]
A0A067F9D4_CITSI	3.6e-34	94.94	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1	[more]
A0A067FKI3_CITSI	2.3e-33	93.67	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1	[more]
A0A067FL79_CITSI	3.0e-33	94.81	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1	[more]
A0A061EJF7_THECC	6.8e-33	93.51	SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019945 PE=4 S...	[more]

BLAST of ClCG02G000050.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80500.1	8.5e-35	89.61	SNARE-like superfamily protein	[more]

BLAST of ClCG02G000050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207117\|gb\|KGN62236.1\|	1.6e-35	100.00	hypothetical protein Csa_2G338800 [Cucumis sativus]	[more]
gi\|449459192\|ref\|XP_004147330.1\|	1.4e-34	100.00	PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus...	[more]
gi\|641845079\|gb\|KDO63968.1\|	5.2e-34	94.94	hypothetical protein CISIN_1g032720mg [Citrus sinensis]	[more]
gi\|659121801\|ref\|XP_008460820.1\|	5.2e-34	98.70	PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo]	[more]
gi\|778670342\|ref\|XP_011649448.1\|	1.2e-33	100.00	PREDICTED: transport protein particle 20 kDa subunit isoform X1 [Cucumis sativus...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006722	Sedlin
IPR011012	Longin-like_dom_sf

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006888	ER to Golgi vesicle-mediated transport
GO:0006810	transport

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006810	transport
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG02G000050	ClCG02G000050	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG02G000050.1	ClCG02G000050.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G000050.1.five_prime_UTR1	ClCG02G000050.1.five_prime_UTR1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G000050.1.cds1	ClCG02G000050.1.cds1	CDS
ClCG02G000050.1.cds2	ClCG02G000050.1.cds2	CDS
ClCG02G000050.1.cds3	ClCG02G000050.1.cds3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G000050.1.three_prime_UTR1	ClCG02G000050.1.three_prime_UTR1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006722	Trafficking protein particle complex subunit 2	PANTHER	PTHR12403	MBP-1 INTERACTING PROTEIN-2A	coord: 1..79 score: 1.4
IPR006722	Trafficking protein particle complex subunit 2	PFAM	PF04628	Sedlin_N	coord: 9..78 score: 2.8
IPR011012	Longin-like domain	unknown	SSF64356	SNARE-like	coord: 1..78 score: 3.57
None	No IPR available	GENE3D	G3DSA:3.30.450.70		coord: 3..78 score: 1.9
None	No IPR available	PANTHER	PTHR12403:SF14	SUBFAMILY NOT NAMED	coord: 1..79 score: 1.4