Cla008852.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTCGCCGTTAAAATCCAGATCGAAGTCCAAATCGGAATCAGAATTGGCTACTTCGAAGTTCACATCTCAGCAGCTTGTGCCGCACGAGAACAATGCCGTCGCCGATCACACTCCGGAGCCGCTGGCTGTTTTTAACCCTAAGATTTCGATGGCGGCTTGTTTGAGAAGGTCACCGAGGTTTAGTCTTAGTCCTGTGGATGTTCGTCTGCGGAATGTGGCTAGAAATAGCGTTAAAAGAGCTCGTTCTGGCTCTTCTACTGATCTGTGTCTTGGATTGTTAGTAGATGAAACTTGCCAGAGAAGGTCACCGAGGCTACATCCTGGATTGACTAGTGGAAATGGAGATGGAACTGGTAAGCTACCTCTAAAGAAATGCAAATTGTTTTTGATGGATGCTAGTGGTAGTTTGAGAAGGTCGCCACGGTTCGACGTGTCCGGGAATGGAAATGGAGAGATGGAGTTGTCTACAAGAATGGCGTCGAAGAAGAGGAGGAAGATCAGCGATTCAGGAAGGTCTGCAACGGAATCAGCCCAGCTCTTGAGACGGTCTCCTCGATTCGACTCAATTAACGGCGATGAGAGGACATGCGGCTTCAATCAGGTGCCCAATACTGTTTCCTTCCATTATTATTGCATTTTCTCGTCCTGATTTTCACCAATTATATCAAATAAATGTAGAATATCTCAATTTGAAAGCAAAACCCTAACACAAATCGTACTCTGGATTTAGCTGGCCTCTGAATTTTCCATATTTTGGATTTTGAAAATTCAGGAAGCGTTCTCTTCGAGAACTGTTTCAATTTGGTAACACCGCAGATTTCGAAAATTCAAAATTTACCCAATTTACTCGGTGTATTTTCCCCCCAGAAAAATAGTACCATAGGGTCTTTCCTCCCAAAGTTTGCATTATTCTTTATTCTGACGAATTTAACGGTTTCGAAAGGAGTTGTTAAGAGTACGGATAGCGTTTTCCCATCGGCAGGTACTCTCTGAGAAAATCGGAGCCATTATTGAAGAAATTTCCCGATGATAATTTGATATATTATATATATACACACTTCTGTTTTGAACGGATGTATATTTATCTCTCTTTTTCGAAAAGTTTATCCTTTCAATTGTGCTGTCCTATCGTGAGCAAAACCCAAGACATTTCCGGCGGGGAGAGTTTTTTTTTCTAGAATTTTAGTCGATTTCTAATAGTTTTGTGTGCGCATTTATCAATGTTCCCTCGTATCAATTAAAATTTTGCTAATAATTGTGTCATTTTCGTAAGTTTATCTATTTATACGTTCTTGGTAGGAAAAAAAATCATACTCTCCACTCTACTTCGTTTGGATAAAAAACTTAATTAGCCTTTTAAAATTTTACAAGCAAATCAATTTGGAATTTCATCGTTGTTTATTTTGTTAGTTGTACACTTGGAAGAAATGTGTAAGAATTTATATATCGACAATTTTTATAAAAGTTTAAATTGATTTACTTATAAAAATTAAAAAATTTATTAGAAATAATTATATGTTGCATATAATAGTTTTCAAACAATTTTTTTCTTTGGATGAAGGTATAAATTGTTAATCTATAGAATTTCATGTTTAAATTAAAATATTTATTATTTGATTGTTTTCAAATATAGCAAAATGAACTAGAATATTTACAAATATAAAGAAATTAGAAATTTAATCGTTTAGTGATAGAAGTCACCGTGATTTTTTTTTAATATTTGTAAATATTTTGATATTTTTCCATTTATAATAATTTTCTTTTATTATTTTAGGGTTTTAATTGTGAAGATTAAGGTTATAACTAACTAATCAAAATTAAAATTGTTTTAGTTGATTTTTTTTTCTGTAAAATTGATTTGAAACAATCACACACTATTTTACTTCTTTAAATAAAGAGACTCTTTCAAAAATAGAAAAATTGTTGAAACAAAATTTTACTTTCTATTAGAGACGTGATAGACTTGGATTGGATAGTATTTGTAAGTAGTTTGATTTTTTTTTTTTTATTTCTAATAATTTTCAATAAATAAATATCACTTTTCTTTTTTCTTTTCAATTTACGATAATCTCGATAATATTTGTTTTTTGCTATTTAATTTACAAGAGGTTTGAAATTTTTGTTGTTAATAATGTCCGGCTGATCAACTGATTTGTTTTTTTCATTATTGTTATTTAACTAAAACTTTTCACATTTTGTAAGAAGCTTTCGAATTGTTAGAAAAAATTTAAAAAGAAAAACCAGTTTTTCAAAAGGAAAGTTATTTTAATTGGCAAAATTGTTGAAAATATTTATAATTCTGTGAAATTTTGCTATATTTGTAAATATTTTGGTATTCGCTTTTTAAATTATCCTGTTATTTTATTTTATTTTATCTTATTGTTATTATTTTTTTAACAACTTAGTTTAGATTTTCAAAATATTATTTTGATGTAGGTTAAAAGAAAAAAGGAAAAAAAAAAAAAAAAAACTCAAAGTGAGAGTAGCATTTCTAAACTTATTATGACCAACAACTAAAAAACAACAGTTATCGAATGGCCTTAATATTAGAACTATAAACCTCAGCTACTGACTAAACTAAATAACAATAAGCCGTCAATTCGAAGGAAAAAAAAAAAAAAAAAAAGCCGTCAATTATGAACCATGATCCTCTTACGAAAATGAACTTCATTTTATAGAGAGCTGGAGTTAGAGTCAATAACACATGGCCCCAACCTTCATTTTATAGAGTGTTGTAGTTGGAGTTATTTTTTTTATTTCGTTTTTTATTCTTTAAATTTGTTCTTTTTGTCATTTTTGTTTAAAGAGAAATAAGTTTATATAGTCTTTCGTCGATGAAAATCTTGTGTTATATTATGAGAGTGAAATGTTTCTTTTACATCATTATAATTAAAAAACTTATAGAAGTCAGTAGACAGTTCAAAGACTTAGATTTTAATTGGTTACAATAAGTTATTACGTCATCATATGTTAAACTAACATTCTAAATCAGTGTTGGTGAAAGAAATATAATTGTTTAATAGAGTAATCCAGCAATTTCTTTCAATTATGATTAAAAGGTATTCCGGCAATTCTTGAAGTCTGAACTTCTTGTTGATGCTGCTACTGTTACTGTATGGCCTACAAGCGTTGCGAGTTACTTTATCATCTGTTTCTTGGTGACGAGCTTATTGAACGGATTTGTTTTACTGCTGAATTGGAAACTGAATTTTACAGGGTGAAAAGGCTACTGAACAATGCTTGACCTCTAAGTGAGTTACGATCTACAAACTTTTATTTGGGGTTAATATTGGTTCAATGCAGCTGAATCTAAATTCCATTTCTAATTGAATTTTGCATCTCCGTTGACAAAGAGCGGGGAATGATGTAGCCAAAAATGTGGAGGGCATGGAACAGAAGTCCGTTAGGAAATCTCCAAGATTTTCATCTAATCAAGTAGAAAATGAAATTCGATGTAATATGTCTTCATCGAAGAAGATTTCCTCAAGAAAGCTTAAATCTCCTAAGAAAGACAGCTTTGATGCACCATTGACAGTCTGCGATGCTGAAATGAGTTCATCAAGAAAATTAGACACAGAAGAATTATCTTTCTTAAAGCAAGAAGAGATTAATGAAGCAATAATTTCTTCGATGTTAGGAACTTCAAAACTCAACGTAGGATTTTGTCACAAGATAGAAGACGAACCATCACCTAGCTTACTGTGTAGAAATCACGAAGAAGAGCCTAAACTCTTCGCTTGCAACTCTCATTTAATTGCCGAGAAGCTTTTAAGAAGGTCTCCAAGGCTTTCCTCAGACTGTAAATGTAATTGCAATGTTGATTATTGTAGTGGATTTGATATGAAAATTCACAAGCCATTAAGTAGATCTCCAAGTCCTTCATTATCTTCACGTGGAAATGAGCAATCCAAGTCCTTAGATAATCAAACGTCCACGTTTGCATGTGGGACTGAAACTAGTAAAATCAGACATTCTTCCTCTGAACTTCTAGAGTCAGGGATAGAAAAAATTAGTAATTCTTCTGGTGCTGACAAGAAAAACAACGTAAGCAAAATGACTTCTTTCTTTGTTGGAGATCCAGTTCCTGCTGTGCTGATGAGGCTCAACAGAGATGGAAATGGCGCTATGAAATGA ATGCCGTCGCCGTTAAAATCCAGATCGAAGTCCAAATCGGAATCAGAATTGGCTACTTCGAAGTTCACATCTCAGCAGCTTGTGCCGCACGAGAACAATGCCGTCGCCGATCACACTCCGGAGCCGCTGGCTGTTTTTAACCCTAAGATTTCGATGGCGGCTTGTTTGAGAAGGTCACCGAGGTTTAGTCTTAGTCCTGTGGATGTTCGTCTGCGGAATGTGGCTAGAAATAGCGTTAAAAGAGCTCGTTCTGGCTCTTCTACTGATCTGTGTCTTGGATTGTTAGTAGATGAAACTTGCCAGAGAAGGTCACCGAGGCTACATCCTGGATTGACTAGTGGAAATGGAGATGGAACTGGTAAGCTACCTCTAAAGAAATGCAAATTGTTTTTGATGGATGCTAGTGGTAGTTTGAGAAGGTCGCCACGGTTCGACGTGTCCGGGAATGGAAATGGAGAGATGGAGTTGTCTACAAGAATGGCGTCGAAGAAGAGGAGGAAGATCAGCGATTCAGGAAGGTCTGCAACGGAATCAGCCCAGCTCTTGAGACGGTCTCCTCGATTCGACTCAATTAACGGCGATGAGAGGACATGCGGCTTCAATCAGGGTGAAAAGGCTACTGAACAATGCTTGACCTCTAAAGCGGGGAATGATGTAGCCAAAAATGTGGAGGGCATGGAACAGAAGTCCGTTAGGAAATCTCCAAGATTTTCATCTAATCAAGTAGAAAATGAAATTCGATGTAATATGTCTTCATCGAAGAAGATTTCCTCAAGAAAGCTTAAATCTCCTAAGAAAGACAGCTTTGATGCACCATTGACAGTCTGCGATGCTGAAATGAGTTCATCAAGAAAATTAGACACAGAAGAATTATCTTTCTTAAAGCAAGAAGAGATTAATGAAGCAATAATTTCTTCGATGTTAGGAACTTCAAAACTCAACGTAGGATTTTGTCACAAGATAGAAGACGAACCATCACCTAGCTTACTGTGTAGAAATCACGAAGAAGAGCCTAAACTCTTCGCTTGCAACTCTCATTTAATTGCCGAGAAGCTTTTAAGAAGGTCTCCAAGGCTTTCCTCAGACTGTAAATGTAATTGCAATGTTGATTATTGTAGTGGATTTGATATGAAAATTCACAAGCCATTAAGTAGATCTCCAAGTCCTTCATTATCTTCACGTGGAAATGAGCAATCCAAGTCCTTAGATAATCAAACGTCCACGTTTGCATGTGGGACTGAAACTAGTAAAATCAGACATTCTTCCTCTGAACTTCTAGAGTCAGGGATAGAAAAAATTAGTAATTCTTCTGGTGCTGACAAGAAAAACAACGTAAGCAAAATGACTTCTTTCTTTGTTGGAGATCCAGTTCCTGCTGTGCTGATGAGGCTCAACAGAGATGGAAATGGCGCTATGAAATGA ATGCCGTCGCCGTTAAAATCCAGATCGAAGTCCAAATCGGAATCAGAATTGGCTACTTCGAAGTTCACATCTCAGCAGCTTGTGCCGCACGAGAACAATGCCGTCGCCGATCACACTCCGGAGCCGCTGGCTGTTTTTAACCCTAAGATTTCGATGGCGGCTTGTTTGAGAAGGTCACCGAGGTTTAGTCTTAGTCCTGTGGATGTTCGTCTGCGGAATGTGGCTAGAAATAGCGTTAAAAGAGCTCGTTCTGGCTCTTCTACTGATCTGTGTCTTGGATTGTTAGTAGATGAAACTTGCCAGAGAAGGTCACCGAGGCTACATCCTGGATTGACTAGTGGAAATGGAGATGGAACTGGTAAGCTACCTCTAAAGAAATGCAAATTGTTTTTGATGGATGCTAGTGGTAGTTTGAGAAGGTCGCCACGGTTCGACGTGTCCGGGAATGGAAATGGAGAGATGGAGTTGTCTACAAGAATGGCGTCGAAGAAGAGGAGGAAGATCAGCGATTCAGGAAGGTCTGCAACGGAATCAGCCCAGCTCTTGAGACGGTCTCCTCGATTCGACTCAATTAACGGCGATGAGAGGACATGCGGCTTCAATCAGGGTGAAAAGGCTACTGAACAATGCTTGACCTCTAAAGCGGGGAATGATGTAGCCAAAAATGTGGAGGGCATGGAACAGAAGTCCGTTAGGAAATCTCCAAGATTTTCATCTAATCAAGTAGAAAATGAAATTCGATGTAATATGTCTTCATCGAAGAAGATTTCCTCAAGAAAGCTTAAATCTCCTAAGAAAGACAGCTTTGATGCACCATTGACAGTCTGCGATGCTGAAATGAGTTCATCAAGAAAATTAGACACAGAAGAATTATCTTTCTTAAAGCAAGAAGAGATTAATGAAGCAATAATTTCTTCGATGTTAGGAACTTCAAAACTCAACGTAGGATTTTGTCACAAGATAGAAGACGAACCATCACCTAGCTTACTGTGTAGAAATCACGAAGAAGAGCCTAAACTCTTCGCTTGCAACTCTCATTTAATTGCCGAGAAGCTTTTAAGAAGGTCTCCAAGGCTTTCCTCAGACTGTAAATGTAATTGCAATGTTGATTATTGTAGTGGATTTGATATGAAAATTCACAAGCCATTAAGTAGATCTCCAAGTCCTTCATTATCTTCACGTGGAAATGAGCAATCCAAGTCCTTAGATAATCAAACGTCCACGTTTGCATGTGGGACTGAAACTAGTAAAATCAGACATTCTTCCTCTGAACTTCTAGAGTCAGGGATAGAAAAAATTAGTAATTCTTCTGGTGCTGACAAGAAAAACAACGTAAGCAAAATGACTTCTTTCTTTGTTGGAGATCCAGTTCCTGCTGTGCTGATGAGGCTCAACAGAGATGGAAATGGCGCTATGAAATGA MPSPLKSRSKSKSESELATSKFTSQQLVPHENNAVADHTPEPLAVFNPKISMAACLRRSPRFSLSPVDVRLRNVARNSVKRARSGSSTDLCLGLLVDETCQRRSPRLHPGLTSGNGDGTGKLPLKKCKLFLMDASGSLRRSPRFDVSGNGNGEMELSTRMASKKRRKISDSGRSATESAQLLRRSPRFDSINGDERTCGFNQGEKATEQCLTSKAGNDVAKNVEGMEQKSVRKSPRFSSNQVENEIRCNMSSSKKISSRKLKSPKKDSFDAPLTVCDAEMSSSRKLDTEELSFLKQEEINEAIISSMLGTSKLNVGFCHKIEDEPSPSLLCRNHEEEPKLFACNSHLIAEKLLRRSPRLSSDCKCNCNVDYCSGFDMKIHKPLSRSPSPSLSSRGNEQSKSLDNQTSTFACGTETSKIRHSSSELLESGIEKISNSSGADKKNNVSKMTSFFVGDPVPAVLMRLNRDGNGAMK
BLAST of Cla008852 vs. TrEMBL
Match: A0A0A0L513_CUCSA (Cytosine-specific methyltransferase OS=Cucumis sativus GN=Csa_3G006640 PE=3 SV=1) HSP 1 Score: 656.0 bits (1691), Expect = 3.5e-185 Identity = 355/469 (75.69%), Postives = 388/469 (82.73%), Query Frame = 1
BLAST of Cla008852 vs. TrEMBL
Match: W9SFR4_9ROSA (DNA (Cytosine-5)-methyltransferase CMT2 OS=Morus notabilis GN=L484_022822 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 5.0e-06 Identity = 72/245 (29.39%), Postives = 100/245 (40.82%), Query Frame = 1
BLAST of Cla008852 vs. TrEMBL
Match: W9SFR4_9ROSA (DNA (Cytosine-5)-methyltransferase CMT2 OS=Morus notabilis GN=L484_022822 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 7.2e-05 Identity = 57/188 (30.32%), Postives = 81/188 (43.09%), Query Frame = 1
HSP 2 Score: 33.1 bits (74), Expect = 1.1e+03 Identity = 34/121 (28.10%), Postives = 49/121 (40.50%), Query Frame = 1
BLAST of Cla008852 vs. NCBI nr
Match: gi|778674903|ref|XP_011650321.1| (PREDICTED: DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [Cucumis sativus]) HSP 1 Score: 656.0 bits (1691), Expect = 5.0e-185 Identity = 355/469 (75.69%), Postives = 388/469 (82.73%), Query Frame = 1
BLAST of Cla008852 vs. NCBI nr
Match: gi|659095493|ref|XP_008448610.1| (PREDICTED: DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [Cucumis melo]) HSP 1 Score: 642.1 bits (1655), Expect = 7.5e-181 Identity = 354/468 (75.64%), Postives = 381/468 (81.41%), Query Frame = 1
BLAST of Cla008852 vs. NCBI nr
Match: gi|778674908|ref|XP_011650322.1| (PREDICTED: DNA (cytosine-5)-methyltransferase CMT2 isoform X2 [Cucumis sativus]) HSP 1 Score: 350.1 bits (897), Expect = 5.9e-93 Identity = 186/238 (78.15%), Postives = 201/238 (84.45%), Query Frame = 1
BLAST of Cla008852 vs. NCBI nr
Match: gi|659095495|ref|XP_008448611.1| (PREDICTED: DNA (cytosine-5)-methyltransferase CMT2 isoform X2 [Cucumis melo]) HSP 1 Score: 335.5 bits (859), Expect = 1.5e-88 Identity = 181/238 (76.05%), Postives = 192/238 (80.67%), Query Frame = 1
BLAST of Cla008852 vs. NCBI nr
Match: gi|1009165926|ref|XP_015901309.1| (PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 78.2 bits (191), Expect = 4.3e-11 Identity = 130/489 (26.58%), Postives = 198/489 (40.49%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
|