ClCG06G010080 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAGGTCGGCAACGCGTAGAAGCCAGCGACGTGTCGCTTGGCGCTGATCTGATCAATCATTTCATCCTCTTTCTCTGGATCTAAATCTCTTTCCCCATTTTCCTTATTTGACTGTCTTCTTCTTCTTCTTACTACACTCTCTTCCGCTCCAATTGCTCTTCGGATCTCTCTCAGGTTAATTCTCCTCCTTTCTTCTTCTTTTCAAATTTCTACTCTCATTGTTCCTATTTTTCTTTCTTTCTCTTCTGTTTAATTTTCTCTTTGTTTTTCTTTTTATTTCTTACATCCTCTTCCTATTTGTTTGCTTCACTTGCTGATCTCCTCGTCATCTGAAAATTTTGATCCGATCCGATCTATATTTTCATAATCTGATTCGGATCTTGAATCGGCTGATTTTCAGGCTGTCTTCTGTAAATCGCACCATTTCTTATTGCTAAATTGTTAATGCCTTTTTGTATCATTTCTTGAGATTCGCTGGTTTCTCTTATGATGTGTGATTAGTTTGGTAGACGTTTAGTAACTTTCAGGGCAACGTATTTTGATCTCCCTCGCAATCAATTTGTTTATGAAGCAATAGTTCTGATCTGAGACTCTAGAATTTTGGTTCATGTTGCTGACGAAAACTATGCATTTTTCTTATGCACGAGTTATTTTGTTTACTTTATCATCCGATTGCATCTCTGTCTTTTTACAACTGAGTGAATACGAGAATTGTTCTAAATTTGTGCATTGGTAATTTGTAATGAAGTTATGGCGTCTTCTGATAAACCTGAGATCGTGGAGAGGGGTGATAAAGACAAAGACCACAAGGAAGATGAAGGTGAAGGGAAGGGTGGATTCCTTGACAAAGTGAAAGATTTCATTCACGATATTGGGGAAAAAATTGAAGAAACGATCGGTTTTGGAAAGCCAACGGCTGATGTCAGTGGGATTCATATTCCATCGATCAATCTAGAGAAGGCTGAGATTGTTGTTGATGTTCTGATTAAAAACCCTAATCCTGTTCCTATTCCCCTAGTTGACATTGACTATTTGATAGAGAGTGATGGCAGGAAACTGATCTCTGGGCTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAGACTGTCAAAATTCCTGTGAAGTTGGTTTATGATGATATAAGGAACACATATCATGACATTAAGCCTGGCAGTATCATTCCATACAGGATCAAGGTTGATCTGATTGTGGATGTGCCTGTTCTTGGGAGGCTGACATTGCCACTTGAGAAAACTGGAGAGATCCCTATTCCTTACAAGCCCGATGTCGATATTGAGAAGATACAGTTCCAGAGATTTTCATTTGAAGAAACTGTTGCCATTCTCCATTTGAAATTGGAAAATAAAAATGACTTTGAGTTGGGATTGAAGGACCTAGATTGTGAAGTCTGGCTCTCTGATGTTAGTATTGGACATGCAGATCTCTCCGAATTTACACCCATTGATAAGAATGGGATCAGTTACGTTGACTTACCCATCACCTTCAGGCCAAAGGACTTCGGTTCGGCACTTTGGGATATGATTAGAGGAAGAGGCACTGGCTACACTATAAAAGGGAATATTCATGTTGACACACCTTTCGGTAAGATGAAGTTGCCCATTGTTAAAGAGGGCGGCACTACTCGCCTCAAGAAGAATAAGGAAGATGGCGTTGACGACGATGACGAGGTATGAGATATCTTCTTCTCTGTTGTTGCTACTGCGTATTTTGACTACCCTTCAAGTTTCAACATCGCAAAAAACCAATTCAACTTGATTCAAAATAGATTTCCCTTGAAACTTCACACTGCTCCAGTGCTGCTATTTTGCACAAACTCTTTAAAGTACTTTGTATATAATTAACATTGAGAAATCATATATTATCTGAAGTCACTATATATCCTTATACAAAAAAGTTAGTTAATGACCGAGACCTGCCTCCTTTCCTAGTTTGTTCAAATTTAAACCAAACGAAGCCATTCTTCCATTGGGTGTACAGGCTCTACTAGAACTAACTCCTGATAGAGTGATAGGACATGGGTCAGAGGAAGCGAGCAAAGTTAAGGGTCATTCAGTTGGATACTCAGAATGAGTCCTCTTTATAACTAGATGATGTGACTGGTAGGGATGAGCAAGACTAAAAAGTTTTAGAGGCTAAAACAATCTAGTGGATAGTTTTATACTATTGGATGTATGAGACAAAATTTTAAAAATATATTTAACCACCATGACGATCAAAGGGAGAACTTGTTAGTAATGAATAGTGAAAGTAGAGGTTATGAATGAATAAAGGTGAATTCTGTTGCATAAAGTTTGTTTCTTTGCCTGTGGGGACATTTATACTTTGTCTGATATGAAGGGTGAATTTGTGGGTGCAGGAGTAAACGAAAGGGCATCATCTGGAGGAATAGTGGTTGGTTTTCTTCTTTCTTATAAAAAGAAGATGATGCTGTTACATAGATGTGTTAAGGAATTGTTTGGCTGAATCTTTTGTTACTTAATTGTCATGGTCGCTGTGTAAGAGACTCCTCCTTTTGTTTTTTAACTACTTAGTTTTGGCACTGACTTTGGATGGTGAATTTGTTGTTTTTGGAAGAGAATGTTGAAATATAGCCAATATTGGCCTTACATTACTTTTAGTTTGTTGTTTCACAAAGGACATTTTCATATGTTGCAATTGATGGTTTCATTGTATCAAGAAAAAATCTACTAAATAAAACAAAAATCTCACCGATGTAGGCATAATATTAATAATAAGAAAAATATTTAAACTTTTTTTTCAAAGGTT AAAAAAAAAGGTCGGCAACGCGTAGAAGCCAGCGACGTGTCGCTTGGCGCTGATCTGATCAATCATTTCATCCTCTTTCTCTGGATCTAAATCTCTTTCCCCATTTTCCTTATTTGACTGTCTTCTTCTTCTTCTTACTACACTCTCTTCCGCTCCAATTGCTCTTCGGATCTCTCTCAGTTATGGCGTCTTCTGATAAACCTGAGATCGTGGAGAGGGGTGATAAAGACAAAGACCACAAGGAAGATGAAGGTGAAGGGAAGGGTGGATTCCTTGACAAAGTGAAAGATTTCATTCACGATATTGGGGAAAAAATTGAAGAAACGATCGGTTTTGGAAAGCCAACGGCTGATGTCAGTGGGATTCATATTCCATCGATCAATCTAGAGAAGGCTGAGATTGTTGTTGATGTTCTGATTAAAAACCCTAATCCTGTTCCTATTCCCCTAGTTGACATTGACTATTTGATAGAGAGTGATGGCAGGAAACTGATCTCTGGGCTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAGACTGTCAAAATTCCTGTGAAGTTGGTTTATGATGATATAAGGAACACATATCATGACATTAAGCCTGGCAGTATCATTCCATACAGGATCAAGGTTGATCTGATTGTGGATGTGCCTGTTCTTGGGAGGCTGACATTGCCACTTGAGAAAACTGGAGAGATCCCTATTCCTTACAAGCCCGATGTCGATATTGAGAAGATACAGTTCCAGAGATTTTCATTTGAAGAAACTGTTGCCATTCTCCATTTGAAATTGGAAAATAAAAATGACTTTGAGTTGGGATTGAAGGACCTAGATTGTGAAGTCTGGCTCTCTGATGTTAGTATTGGACATGCAGATCTCTCCGAATTTACACCCATTGATAAGAATGGGATCAGTTACGTTGACTTACCCATCACCTTCAGGCCAAAGGACTTCGGTTCGGCACTTTGGGATATGATTAGAGGAAGAGGCACTGGCTACACTATAAAAGGGAATATTCATGTTGACACACCTTTCGGTAAGATGAAGTTGCCCATTGTTAAAGAGGGCGGCACTACTCGCCTCAAGAAGAATAAGGAAGATGGCGTTGACGACGATGACGAGGTT ATGGCGTCTTCTGATAAACCTGAGATCGTGGAGAGGGGTGATAAAGACAAAGACCACAAGGAAGATGAAGGTGAAGGGAAGGGTGGATTCCTTGACAAAGTGAAAGATTTCATTCACGATATTGGGGAAAAAATTGAAGAAACGATCGGTTTTGGAAAGCCAACGGCTGATGTCAGTGGGATTCATATTCCATCGATCAATCTAGAGAAGGCTGAGATTGTTGTTGATGTTCTGATTAAAAACCCTAATCCTGTTCCTATTCCCCTAGTTGACATTGACTATTTGATAGAGAGTGATGGCAGGAAACTGATCTCTGGGCTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAGACTGTCAAAATTCCTGTGAAGTTGGTTTATGATGATATAAGGAACACATATCATGACATTAAGCCTGGCAGTATCATTCCATACAGGATCAAGGTTGATCTGATTGTGGATGTGCCTGTTCTTGGGAGGCTGACATTGCCACTTGAGAAAACTGGAGAGATCCCTATTCCTTACAAGCCCGATGTCGATATTGAGAAGATACAGTTCCAGAGATTTTCATTTGAAGAAACTGTTGCCATTCTCCATTTGAAATTGGAAAATAAAAATGACTTTGAGTTGGGATTGAAGGACCTAGATTGTGAAGTCTGGCTCTCTGATGTTAGTATTGGACATGCAGATCTCTCCGAATTTACACCCATTGATAAGAATGGGATCAGTTACGTTGACTTACCCATCACCTTCAGGCCAAAGGACTTCGGTTCGGCACTTTGGGATATGATTAGAGGAAGAGGCACTGGCTACACTATAAAAGGGAATATTCATGTTGACACACCTTTCGGTAAGATGAAGTTGCCCATTGTTAAAGAGGGCGGCACTACTCGCCTCAAGAAGAATAAGGAAGATGGCGTTGACGACGATGACGAGGTT MASSDKPEIVERGDKDKDHKEDEGEGKGGFLDKVKDFIHDIGEKIEETIGFGKPTADVSGIHIPSINLEKAEIVVDVLIKNPNPVPIPLVDIDYLIESDGRKLISGLIPDAGTIHAHGEETVKIPVKLVYDDIRNTYHDIKPGSIIPYRIKVDLIVDVPVLGRLTLPLEKTGEIPIPYKPDVDIEKIQFQRFSFEETVAILHLKLENKNDFELGLKDLDCEVWLSDVSIGHADLSEFTPIDKNGISYVDLPITFRPKDFGSALWDMIRGRGTGYTIKGNIHVDTPFGKMKLPIVKEGGTTRLKKNKEDGVDDDDEV
BLAST of ClCG06G010080 vs. Swiss-Prot
Match: LEA14_SOYBN (Desiccation protectant protein Lea14 homolog OS=Glycine max PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.4e-18 Identity = 47/152 (30.92%), Postives = 83/152 (54.61%), Query Frame = 1
BLAST of ClCG06G010080 vs. Swiss-Prot
Match: LEA14_GOSHI (Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum GN=LEA14-A PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.5e-18 Identity = 49/152 (32.24%), Postives = 79/152 (51.97%), Query Frame = 1
BLAST of ClCG06G010080 vs. Swiss-Prot
Match: LEA14_ARATH (Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana GN=LEA14 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.0e-16 Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 1
BLAST of ClCG06G010080 vs. Swiss-Prot
Match: LEA2R_ARATH (Desiccation-related protein At2g46140 OS=Arabidopsis thaliana GN=At2g46140 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.1e-14 Identity = 46/162 (28.40%), Postives = 74/162 (45.68%), Query Frame = 1
BLAST of ClCG06G010080 vs. Swiss-Prot
Match: DRPD_CRAPL (Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.7e-14 Identity = 41/152 (26.97%), Postives = 79/152 (51.97%), Query Frame = 1
BLAST of ClCG06G010080 vs. TrEMBL
Match: A0A0A0LID3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G151040 PE=4 SV=1) HSP 1 Score: 619.4 bits (1596), Expect = 2.4e-174 Identity = 304/315 (96.51%), Postives = 310/315 (98.41%), Query Frame = 1
BLAST of ClCG06G010080 vs. TrEMBL
Match: B9T526_RICCO (Late embryogenesis abundant protein Lea14-A, putative OS=Ricinus communis GN=RCOM_0211380 PE=4 SV=1) HSP 1 Score: 544.3 bits (1401), Expect = 1.0e-151 Identity = 264/315 (83.81%), Postives = 292/315 (92.70%), Query Frame = 1
BLAST of ClCG06G010080 vs. TrEMBL
Match: A0A067KCH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19252 PE=4 SV=1) HSP 1 Score: 543.5 bits (1399), Expect = 1.7e-151 Identity = 262/317 (82.65%), Postives = 295/317 (93.06%), Query Frame = 1
BLAST of ClCG06G010080 vs. TrEMBL
Match: A0A068VED3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00002111001 PE=4 SV=1) HSP 1 Score: 542.3 bits (1396), Expect = 3.8e-151 Identity = 263/316 (83.23%), Postives = 293/316 (92.72%), Query Frame = 1
BLAST of ClCG06G010080 vs. TrEMBL
Match: A0A067E7B9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018706mg PE=4 SV=1) HSP 1 Score: 540.0 bits (1390), Expect = 1.9e-150 Identity = 257/316 (81.33%), Postives = 290/316 (91.77%), Query Frame = 1
BLAST of ClCG06G010080 vs. TAIR10
Match: AT2G44060.1 (AT2G44060.1 Late embryogenesis abundant protein, group 2) HSP 1 Score: 498.4 bits (1282), Expect = 3.2e-141 Identity = 240/308 (77.92%), Postives = 274/308 (88.96%), Query Frame = 1
BLAST of ClCG06G010080 vs. TAIR10
Match: AT1G01470.1 (AT1G01470.1 Late embryogenesis abundant protein) HSP 1 Score: 89.0 bits (219), Expect = 5.8e-18 Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 1
BLAST of ClCG06G010080 vs. TAIR10
Match: AT2G46140.1 (AT2G46140.1 Late embryogenesis abundant protein) HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15 Identity = 46/162 (28.40%), Postives = 74/162 (45.68%), Query Frame = 1
BLAST of ClCG06G010080 vs. NCBI nr
Match: gi|659114748|ref|XP_008457211.1| (PREDICTED: uncharacterized protein LOC103496938 [Cucumis melo]) HSP 1 Score: 621.3 bits (1601), Expect = 9.2e-175 Identity = 305/315 (96.83%), Postives = 310/315 (98.41%), Query Frame = 1
BLAST of ClCG06G010080 vs. NCBI nr
Match: gi|449442405|ref|XP_004138972.1| (PREDICTED: uncharacterized protein LOC101217348 [Cucumis sativus]) HSP 1 Score: 619.4 bits (1596), Expect = 3.5e-174 Identity = 304/315 (96.51%), Postives = 310/315 (98.41%), Query Frame = 1
BLAST of ClCG06G010080 vs. NCBI nr
Match: gi|255585293|ref|XP_002533345.1| (PREDICTED: uncharacterized protein LOC8261701 [Ricinus communis]) HSP 1 Score: 544.3 bits (1401), Expect = 1.4e-151 Identity = 264/315 (83.81%), Postives = 292/315 (92.70%), Query Frame = 1
BLAST of ClCG06G010080 vs. NCBI nr
Match: gi|802676232|ref|XP_012081906.1| (PREDICTED: uncharacterized protein LOC105641870 [Jatropha curcas]) HSP 1 Score: 543.5 bits (1399), Expect = 2.4e-151 Identity = 262/317 (82.65%), Postives = 295/317 (93.06%), Query Frame = 1
BLAST of ClCG06G010080 vs. NCBI nr
Match: gi|661877011|emb|CDP19086.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 542.3 bits (1396), Expect = 5.4e-151 Identity = 263/316 (83.23%), Postives = 293/316 (92.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|