ClCG06G004030 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGTCTTCATGCTGGACGAAATCCACGAGTTCGTGGACGCCATCTCCATCCTGGCCGGACTTGACTATGTATTCGATCTCAAGTTCTCACCAAAAATGTTCTCCATAATGGTCAACCGCACACCTTCCTCTCGTTGCACTATAGCCCTTCAACTATTCCCTCCATTCTTCAACCAAGGATATTCTTGCCAACAACTTCACTACTCATGGATTTACATCAACCAGTTTTTCCCCGAAATGTTCCATTTGGAACGAACCGGTTTTTCTTCACTCACTTTCTCTTTCGCAGATCCACATCATGCCGACCTCACATTTCGCAGTGCCGATGGTTTGTTTAATTTTCTCCTCATTCTTGAATATATATATGTTCTTGCAAGTTCTTTAGTGTGTGACATTCAAATTATTGCTTTTAGGCCGTCTTCGTGCAGTTGATTTCCCAATGTATCATTCGGACGAGTCGATGGATGTGGGTGAGTTCGATTTGGGAACTTTCGTCTCCTTCAGTTCACGAGAGTTCATTAACATTGTAACGTTGAATAATTTTGATTCTGGTAAAAAAATTATGCCCTTCTTCTCTTACCACATATTTATTTGAAAGAAAATGCATGGTCTTAAGTTTGAAATAATTTTTTTTATTTTTTGGGTTATATTTCATACAGTTATGGTCACACTCACGAATTCACAAGTCAAGTTCTCTTATGCGGGGACAGACATGATTCTTACTCAAGAGGTATGTATTTTTTTTTTTTTTTTTTTTTTATGGCCAAGATGTTAATTAGACCATTAATTTCTGTAGGCAAAGTTTGAAGATAGCATAAAGTTTTTTTAAGAGTGAAACATATTTGAATTATAGATTTGTTGCGCATGAATTTAACATTCAAATATATGTATATTTTTGAAAATATTCACAAGGCAAGATGGATCAGGAGGTGCACCGCTATATCTCTACTAGGTTGACACCCCCTAGCACCATTTTTTTGTGACAGTTATTTTTAGTCATTAAATGACACACATTCAAGTATGAATATCAACGACACTTTCTAAATAGAAAGATGTCCTTTTGGCATTGATAGAAAGATGTCCTCTTGGCAACACTCATACATCTCAAAAGGGAGAAGATTGACCCTTATACAAGCGGTACTTAGCAGTTTACCAACCTACTACTTATATTTGTTCTGCGCTCCAAATGTCAGTTTGTGAGGTAATTGAGAGAAAAAATGAGGAATTTTTTGTGGGTTGGTTCAGATGACAGAGAGGGGTCTCATCTTGTTAGATGGGATTTCATCACCAGACCCAAAGAAGCTGGAGGGCTCGGTATTGATAGTGTGAAATTCTCAAATGAAACTCTTATTAGCAAATGGATTTGGAGATAGCACAAGGAGCCTAATCAACTTTGGAGAAGACCCATTGACAGTAAATATGTGGTGATTTCACCGGGTGCTATCCCATCGAAATGTAAACATATCAACTCAAAATCTCCATGGTTCAATATTGTAAAAATGGAGACCAATATTGGGAATCACATCCAGCGAAAAGTGAGAAATGGAGCTAATATCCTCTTTTGGTTCCATCAATGGACCAATGAAACCCCATTATATCAGAAACTCTCCAGATTTTTTCATTTAGCTATCAATCCCCTCATTACTGTCAGAGACGCTTGGAACACTACCAATAGTACCTGGGATCCACATTTTAGGCGATCTTTATTGCCCAGGGAGAGTCAAAACTAG ATGTTCGTCTTCATGCTGGACGAAATCCACGAGTTCGTGGACGCCATCTCCATCCTGGCCGGACTTGACTATGTATTCGATCTCAAGTTCTCACCAAAAATGTTCTCCATAATGGTCAACCGCACACCTTCCTCTCGTTGCACTATAGCCCTTCAACTATTCCCTCCATTCTTCAACCAAGGATATTCTTGCCAACAACTTCACTACTCATGGATTTACATCAACCAGTTTTTCCCCGAAATGTTCCATTTGGAACGAACCGGTTTTTCTTCACTCACTTTCTCTTTCGCAGATCCACATCATGCCGACCTCACATTTCGCAGTGCCGATGGCCGTCTTCGTGCAGTTGATTTCCCAATGTATCATTCGGACGAGTCGATGGATGTGGGTGAGTTCGATTTGGGAACTTTCGTCTCCTTCAGTTCACGAGAGTTCATTAACATTGTAACGTTGAATAATTTTGATTCTGTTATGGTCACACTCACGAATTCACAAGTCAAGTTCTCTTATGCGGGGACAGACATGATTCTTACTCAAGAGAAAGATGTCCTCTTGGCAACACTCATACATCTCAAAAGGGAGAAGATTGACCCTTATACAAGCGTTTACCAACCTACTACTTATATTTGTTCTGCGCTCCAAATGTCAGTTTGTGAGATGACAGAGAGGGGTCTCATCTTGTTAGATGGGATTTCATCACCAGACCCAAAGAAGCTGGAGGGCTCGCACAAGGAGCCTAATCAACTTTGGAGAAGACCCATTGACAGTAAATATGTGGTGATTTCACCGGGTGCTATCCCATCGAAATGTAAACATATCAACTCAAAATCTCCATGGTTCAATATTGTAAAAATGGAGACCAATATTGGGAATCACATCCAGCGAAAAGTGAGAAATGGAGCTAATATCCTCTTTTGGTTCCATCAATGGACCAATGAAACCCCATTATATCAGAAACTCTCCAGATTTTTTCATTTAGCTATCAATCCCCTCATTACTGTCAGAGACGCTTGGAACACTACCAATAGTACCTGGGATCCACATTTTAGGCGATCTTTATTGCCCAGGGAGAGTCAAAACTAG ATGTTCGTCTTCATGCTGGACGAAATCCACGAGTTCGTGGACGCCATCTCCATCCTGGCCGGACTTGACTATGTATTCGATCTCAAGTTCTCACCAAAAATGTTCTCCATAATGGTCAACCGCACACCTTCCTCTCGTTGCACTATAGCCCTTCAACTATTCCCTCCATTCTTCAACCAAGGATATTCTTGCCAACAACTTCACTACTCATGGATTTACATCAACCAGTTTTTCCCCGAAATGTTCCATTTGGAACGAACCGGTTTTTCTTCACTCACTTTCTCTTTCGCAGATCCACATCATGCCGACCTCACATTTCGCAGTGCCGATGGCCGTCTTCGTGCAGTTGATTTCCCAATGTATCATTCGGACGAGTCGATGGATGTGGGTGAGTTCGATTTGGGAACTTTCGTCTCCTTCAGTTCACGAGAGTTCATTAACATTGTAACGTTGAATAATTTTGATTCTGTTATGGTCACACTCACGAATTCACAAGTCAAGTTCTCTTATGCGGGGACAGACATGATTCTTACTCAAGAGAAAGATGTCCTCTTGGCAACACTCATACATCTCAAAAGGGAGAAGATTGACCCTTATACAAGCGTTTACCAACCTACTACTTATATTTGTTCTGCGCTCCAAATGTCAGTTTGTGAGATGACAGAGAGGGGTCTCATCTTGTTAGATGGGATTTCATCACCAGACCCAAAGAAGCTGGAGGGCTCGCACAAGGAGCCTAATCAACTTTGGAGAAGACCCATTGACAGTAAATATGTGGTGATTTCACCGGGTGCTATCCCATCGAAATGTAAACATATCAACTCAAAATCTCCATGGTTCAATATTGTAAAAATGGAGACCAATATTGGGAATCACATCCAGCGAAAAGTGAGAAATGGAGCTAATATCCTCTTTTGGTTCCATCAATGGACCAATGAAACCCCATTATATCAGAAACTCTCCAGATTTTTTCATTTAGCTATCAATCCCCTCATTACTGTCAGAGACGCTTGGAACACTACCAATAGTACCTGGGATCCACATTTTAGGCGATCTTTATTGCCCAGGGAGAGTCAAAACTAG MFVFMLDEIHEFVDAISILAGLDYVFDLKFSPKMFSIMVNRTPSSRCTIALQLFPPFFNQGYSCQQLHYSWIYINQFFPEMFHLERTGFSSLTFSFADPHHADLTFRSADGRLRAVDFPMYHSDESMDVGEFDLGTFVSFSSREFINIVTLNNFDSVMVTLTNSQVKFSYAGTDMILTQEKDVLLATLIHLKREKIDPYTSVYQPTTYICSALQMSVCEMTERGLILLDGISSPDPKKLEGSHKEPNQLWRRPIDSKYVVISPGAIPSKCKHINSKSPWFNIVKMETNIGNHIQRKVRNGANILFWFHQWTNETPLYQKLSRFFHLAINPLITVRDAWNTTNSTWDPHFRRSLLPRESQN
BLAST of ClCG06G004030 vs. TrEMBL
Match: A0A0A0K833_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002320 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.1e-48 Identity = 95/111 (85.59%), Postives = 99/111 (89.19%), Query Frame = 1
BLAST of ClCG06G004030 vs. TrEMBL
Match: A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 5.0e-22 Identity = 62/172 (36.05%), Postives = 98/172 (56.98%), Query Frame = 1
BLAST of ClCG06G004030 vs. TrEMBL
Match: A0A0A0KA18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.4e-16 Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 1
BLAST of ClCG06G004030 vs. TrEMBL
Match: A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 3.1e-16 Identity = 58/173 (33.53%), Postives = 88/173 (50.87%), Query Frame = 1
BLAST of ClCG06G004030 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 6.9e-08 Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = 1
BLAST of ClCG06G004030 vs. NCBI nr
Match: gi|659116807|ref|XP_008458269.1| (PREDICTED: uncharacterized protein LOC103497738 [Cucumis melo]) HSP 1 Score: 296.2 bits (757), Expect = 7.7e-77 Identity = 147/182 (80.77%), Postives = 158/182 (86.81%), Query Frame = 1
BLAST of ClCG06G004030 vs. NCBI nr
Match: gi|700190434|gb|KGN45638.1| (hypothetical protein Csa_6G002320 [Cucumis sativus]) HSP 1 Score: 200.7 bits (509), Expect = 4.4e-48 Identity = 95/111 (85.59%), Postives = 99/111 (89.19%), Query Frame = 1
BLAST of ClCG06G004030 vs. NCBI nr
Match: gi|659119586|ref|XP_008459734.1| (PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo]) HSP 1 Score: 127.5 bits (319), Expect = 4.8e-26 Identity = 65/172 (37.79%), Postives = 105/172 (61.05%), Query Frame = 1
BLAST of ClCG06G004030 vs. NCBI nr
Match: gi|659117587|ref|XP_008458680.1| (PREDICTED: uncharacterized protein LOC103498008 [Cucumis melo]) HSP 1 Score: 122.1 bits (305), Expect = 2.0e-24 Identity = 74/158 (46.84%), Postives = 96/158 (60.76%), Query Frame = 1
BLAST of ClCG06G004030 vs. NCBI nr
Match: gi|778686233|ref|XP_004146827.2| (PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus]) HSP 1 Score: 113.6 bits (283), Expect = 7.1e-22 Identity = 62/172 (36.05%), Postives = 98/172 (56.98%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|