ClCG06G003920 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTAGGTGATGGTTATGTTTTGAATCGTCAATTGAAGATGTTTGTTTCGGGTCACAGCGATGTAAAGCAACAAATTGATTATTCAATTTTTGTTTCAATTGATTCAAATGAATTCAAACGCATTCTAGAGCATAATGTTTTCTTAGGTTGATATTTTTTTTTTCTTTAATTCCTTTTCTTGGATTATTCCTCGGAAGAAAATGGTTGTGATTTTCTTTAAATTGATTTGTTGCAGTTCATGTTACTCTCACAAATTCACAAGTCAAATTCTCTGGACCAATTGCAGAGATTATTCTTACCACTAAGGTAAGGTTAATCAGAATATTAAATGAATAATTGAAAAATAAGATTTGTATATAAAAGTATAGAAATTCATGAATAAAGATTTGTATTTGATAAAACGATAGATAATTAATTAGTATATTTGCATTACTATTAGTTTAGTTATTAATTTTAGATTAATGTATGTTTATTTAAGTTGGTGTAATTAATTATTTCGTCTTATATATATTTTTTAAGTGTATAAATAGTCCACTTTAGTGTTATATATTTTTCACATAGCGAATTTCTTTGTGGTGGTTTGTAGTTTACTTCAGGTTTAGAGTTTTCCACGTAAATTCTTAATTTTGTCATTTTCATTAAAATTCTCGTGAATTTTCTTAATATGGTTTTTCCCTACATGGATTTTTCATTTTTTAGCTATAGATTTGGTATAATACCTTCGTATCAAACACATATTGAAAAAAAATGGTTGGGTGATGTTGTGCAGGAAAGAAAATGCATAATTGGAGGTCTTGCTGCAGGAGATGAAATTCAATTCCTAATCCCTTTCTCTTTTCATAGCTTTTATTTTGAATTGACAAATTGGTCAAAAAGAATTTGGTTATTCAAGTCAACTAATTCCTGGAGCATGATCACTGCACCTATTGGATTGTATGTTCGATATTCTATTTATTTTCCGGAA TTTTAGGTGATGGTTATGTTTTGAATCGTCAATTGAAGATGTTTGTTTCGGGTCACAGCGATGTAAAGCAACAAATTGATTATTCAATTTTTGTTTCAATTGATTCAAATGAATTCAAACGCATTCTAGAGCATAATGTTTTCTTAGTTCATGTTACTCTCACAAATTCACAAGTCAAATTCTCTGGACCAATTGCAGAGATTATTCTTACCACTAAGATTAATGAAAGAAAATGCATAATTGGAGGTCTTGCTGCAGGAGATGAAATTCAATTCCTAATCCCTTTCTCTTTTCATAGCTTTTATTTTGAATTGACAAATTGGTCAAAAAGAATTTGGTTATTCAAGTCAACTAATTCCTGGAGCATGATCACTGCACCTATTGGATTGTATGTTCGATATTCTATTTATTTTCCGGAA ATGTTTGTTTCGGGTCACAGCGATGTAAAGCAACAAATTGATTATTCAATTTTTGTTTCAATTGATTCAAATGAATTCAAACGCATTCTAGAGCATAATGTTTTCTTAGTTCATGTTACTCTCACAAATTCACAAGTCAAATTCTCTGGACCAATTGCAGAGATTATTCTTACCACTAAGATTAATGAAAGAAAATGCATAATTGGAGGTCTTGCTGCAGGAGATGAAATTCAATTCCTAATCCCTTTCTCTTTTCATAGCTTTTATTTTGAATTGACAAATTGGTCAAAAAGAATTTGGTTATTCAAGTCAACTAATTCCTGGAGCATGATCACTGCACCTATTGGATTGTATGTTCGATATTCTATTTATTTTCCGGAA MFVSGHSDVKQQIDYSIFVSIDSNEFKRILEHNVFLVHVTLTNSQVKFSGPIAEIILTTKINERKCIIGGLAAGDEIQFLIPFSFHSFYFELTNWSKRIWLFKSTNSWSMITAPIGLYVRYSIYFPE
BLAST of ClCG06G003920 vs. TrEMBL
Match: A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.2e-17 Identity = 55/117 (47.01%), Postives = 78/117 (66.67%), Query Frame = 1
BLAST of ClCG06G003920 vs. TrEMBL
Match: A0A0A0LLD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G154090 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.1e-16 Identity = 49/116 (42.24%), Postives = 75/116 (64.66%), Query Frame = 1
BLAST of ClCG06G003920 vs. TrEMBL
Match: A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.0e-14 Identity = 51/117 (43.59%), Postives = 75/117 (64.10%), Query Frame = 1
BLAST of ClCG06G003920 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 6.7e-14 Identity = 48/116 (41.38%), Postives = 69/116 (59.48%), Query Frame = 1
BLAST of ClCG06G003920 vs. TrEMBL
Match: A0A0A0KNE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G469020 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-13 Identity = 47/115 (40.87%), Postives = 70/115 (60.87%), Query Frame = 1
BLAST of ClCG06G003920 vs. NCBI nr
Match: gi|700190437|gb|KGN45641.1| (hypothetical protein Csa_6G002350 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 3.2e-17 Identity = 55/117 (47.01%), Postives = 78/117 (66.67%), Query Frame = 1
BLAST of ClCG06G003920 vs. NCBI nr
Match: gi|659117581|ref|XP_008458677.1| (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]) HSP 1 Score: 93.2 bits (230), Expect = 3.5e-16 Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1
BLAST of ClCG06G003920 vs. NCBI nr
Match: gi|778674138|ref|XP_011650141.1| (PREDICTED: uncharacterized protein LOC101209763 [Cucumis sativus]) HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15 Identity = 49/116 (42.24%), Postives = 75/116 (64.66%), Query Frame = 1
BLAST of ClCG06G003920 vs. NCBI nr
Match: gi|700206403|gb|KGN61522.1| (hypothetical protein Csa_2G154090 [Cucumis sativus]) HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15 Identity = 49/116 (42.24%), Postives = 75/116 (64.66%), Query Frame = 1
BLAST of ClCG06G003920 vs. NCBI nr
Match: gi|659114864|ref|XP_008457262.1| (PREDICTED: uncharacterized protein LOC103496987 [Cucumis melo]) HSP 1 Score: 89.4 bits (220), Expect = 5.1e-15 Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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