ClCG03G011940 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCTCAAACAAAGTCTTCACTACTTTGTTGATTTTGACCTCCAAACCGCTTTCAAAGTCGTCGAGATCGAGCTTGGATTCTTACATGATTCACTCTACACACAATTCCCCATCCTTCTTTGGTGCTCTTCTTCGCTTTATTACTTCCTTTTCCATTCTCTCAGCCATCATTGCATTCATCTTGATCGATAAGCAAAGTACCCTTTACAAGATTGTGTATTTCACTTTTATATTACTTTTTGGAGCTCTAGGAGTTGAAATTTACTCTGTTTTTCGGATTGGTGTGTAATTTGGTTGACCCAAATTGACAATTTTCTTGCTCGTTTGATGTTGAAAGCCCATCTATGCCTTTGGGTGGTCTCTTGAGATGAAAAGATGGTGTAATTCGATTCCGCAGTACAATCTATTTACTAGTTGTTTTGAAGATATAAACATATACAGACACGGCAGGTCGATGGTCTGGTCAAATCCTTTCGAAATCAAGACCAATATTTCACGACCAATTTCGAATCAACTTAAGAAACGAATCTTTGAAGAGTTAAACAAGATGGTGGAAATCAAGAGGGAGGAGGGTGATTGGGTTGGAGCATGGAATTGGATTCAGTTCAAAGCATACTCCTTTGGCACATTGCCACAGAGATTTGCTACTACTCACATCACAAAAACAAGGCTTTCAATCATTCAATATCTCTTCTTCAAGACACTAAATTGTTGTCTAATTACCTCGCCTACCTTTTAGCATATCGTCAATCCTTGTTCTCGAACGGGGTGGGACGAACAAGATTCGAAGCAACGGTTATCGACACTAAGGATTTTCTCCGACGACATGTCCCGATATTGTTGGGAAGAGTTGAGCATGCTTATGAGTATGTATTGGAAGATTTGGAGTTGAGAGTTGGGTGTAGAAAAGATGTTAAAGAATTGGGAGTTGGGTCAGTGCTAAACTATGGGTTCTTGTTGGCTAAGGAGCTTCAAAGGTTGGAAGAAAATGAGAGGTGGGAGATGATGAGCCATGAATGGGTGGAGTTGCTTGCTAAGGTTGCTTGTGAATGTAAATTTTATGATCATATTGAGCAACTTGGACATGGAGGAGACTTACTCACCCATGTTTGGCTTTTGATGCATCATATTGGTTATACAAAACAAGCTTATGATGTTACAAATGCCAGAGATGAACAAATCCAAGAATTTCGTAGGGTTTTAAAACGTCGTAGAGGTGGTGGATCAAGTCGATTTGATCTTATTCAACCATAACGAAGGATTAAAATATCGATGTCGATATTAAAATTTCAATTTTACGGATATATGGATAAAATATCGATATCCAAAAAAAATTTCTATAACTCAAAAATATTTAGAAAGTTTATTTTGATTGATAATTAAGTTGTTTTTATTCTCAAATTAAGTTATGGACATTGTTATTAGTATTTCTATTCATAATGGATTAAATAGATACATTTTTATGTTTTATGAGTATTAAGATATCTGTGGATATTTAATATCGATGTCAAACTCTTAGATTTATGGATATGTCAATGGATATTTCCATCCTTGACCATAACTTAACCTTTTTTTTTTATTTTTTTTATTTTTTTAAATTTTTTTTAATTTTTTTTTTAATTTTTTTTTTTAAGAGATGCCAATTTGGGTAA ATGATCTCAAACAAAGTCTTCACTACTTTGTTGATTTTGACCTCCAAACCGCTTTCAAAGTCGTCGAGATCGAGCTTGGATTCTTACATGATTCACTCTACACACAATTCCCCATCCTTCTTTGGTGCTCTTCTTCGCTTTATTACTTCCTTTTCCATTCTCTCAGCCATCATTGCATTCATCTTGATCGATAAGCAAAGTACCCTTTACAAGATTGTGTATTTCACTTTTATATTACTTTTTGGAGCTCTAGGAGTTGAAATTTACTCTGTTTTTCGGATTGGTCCCATCTATGCCTTTGGGTGGTCTCTTGAGATGAAAAGATGGTGTAATTCGATTCCGCAGTACAATCTATTTACTAGTTGTTTTGAAGATATAAACATATACAGACACGGCAGGTCGATGGTCTGGTCAAATCCTTTCGAAATCAAGACCAATATTTCACGACCAATTTCGAATCAACTTAAGAAACGAATCTTTGAAGAGTTAAACAAGATGGTGGAAATCAAGAGGGAGGAGGTTCAAAGCATACTCCTTTGGCACATTGCCACAGAGATTTGCTACTACTCACATCACAAAAACAAGGCTTTCAATCATTCAATATCTCTTCTTCAAGACACTAAATTGTTGTCTAATTACCTCGCCTACCTTTTAGCATATCGTCAATCCTTGTTCTCGAACGGGGTGGGACGAACAAGATTCGAAGCAACGGTTATCGACACTAAGGATTTTCTCCGACGACATGTCCCGATATTGTTGGGAAGAGTTGAGCATGCTTATGAGTATGTATTGGAAGATTTGGAGTTGAGAGTTGGGTGTAGAAAAGATGTTAAAGAATTGGGAGTTGGGTCAGTGCTAAACTATGGGTTCTTGTTGGCTAAGGAGCTTCAAAGGTTGGAAGAAAATGAGAGGTGGGAGATGATGAGCCATGAATGGGTGGAGTTGCTTGCTAAGGTTGCTTGTGAATGTAAATTTTATGATCATATTGAGCAACTTGGACATGGAGGAGACTTACTCACCCATGTTTGGCTTTTGATGCATCATATTGGTTATACAAAACAAGCTTATGATGTTACAAATGCCAGAGATGAACAAATCCAAGAATTTCGTAGGAGATGCCAATTTGGGTAA ATGATCTCAAACAAAGTCTTCACTACTTTGTTGATTTTGACCTCCAAACCGCTTTCAAAGTCGTCGAGATCGAGCTTGGATTCTTACATGATTCACTCTACACACAATTCCCCATCCTTCTTTGGTGCTCTTCTTCGCTTTATTACTTCCTTTTCCATTCTCTCAGCCATCATTGCATTCATCTTGATCGATAAGCAAAGTACCCTTTACAAGATTGTGTATTTCACTTTTATATTACTTTTTGGAGCTCTAGGAGTTGAAATTTACTCTGTTTTTCGGATTGGTCCCATCTATGCCTTTGGGTGGTCTCTTGAGATGAAAAGATGGTGTAATTCGATTCCGCAGTACAATCTATTTACTAGTTGTTTTGAAGATATAAACATATACAGACACGGCAGGTCGATGGTCTGGTCAAATCCTTTCGAAATCAAGACCAATATTTCACGACCAATTTCGAATCAACTTAAGAAACGAATCTTTGAAGAGTTAAACAAGATGGTGGAAATCAAGAGGGAGGAGGTTCAAAGCATACTCCTTTGGCACATTGCCACAGAGATTTGCTACTACTCACATCACAAAAACAAGGCTTTCAATCATTCAATATCTCTTCTTCAAGACACTAAATTGTTGTCTAATTACCTCGCCTACCTTTTAGCATATCGTCAATCCTTGTTCTCGAACGGGGTGGGACGAACAAGATTCGAAGCAACGGTTATCGACACTAAGGATTTTCTCCGACGACATGTCCCGATATTGTTGGGAAGAGTTGAGCATGCTTATGAGTATGTATTGGAAGATTTGGAGTTGAGAGTTGGGTGTAGAAAAGATGTTAAAGAATTGGGAGTTGGGTCAGTGCTAAACTATGGGTTCTTGTTGGCTAAGGAGCTTCAAAGGTTGGAAGAAAATGAGAGGTGGGAGATGATGAGCCATGAATGGGTGGAGTTGCTTGCTAAGGTTGCTTGTGAATGTAAATTTTATGATCATATTGAGCAACTTGGACATGGAGGAGACTTACTCACCCATGTTTGGCTTTTGATGCATCATATTGGTTATACAAAACAAGCTTATGATGTTACAAATGCCAGAGATGAACAAATCCAAGAATTTCGTAGGAGATGCCAATTTGGGTAA MISNKVFTTLLILTSKPLSKSSRSSLDSYMIHSTHNSPSFFGALLRFITSFSILSAIIAFILIDKQSTLYKIVYFTFILLFGALGVEIYSVFRIGPIYAFGWSLEMKRWCNSIPQYNLFTSCFEDINIYRHGRSMVWSNPFEIKTNISRPISNQLKKRIFEELNKMVEIKREEVQSILLWHIATEICYYSHHKNKAFNHSISLLQDTKLLSNYLAYLLAYRQSLFSNGVGRTRFEATVIDTKDFLRRHVPILLGRVEHAYEYVLEDLELRVGCRKDVKELGVGSVLNYGFLLAKELQRLEENERWEMMSHEWVELLAKVACECKFYDHIEQLGHGGDLLTHVWLLMHHIGYTKQAYDVTNARDEQIQEFRRRCQFG
BLAST of ClCG03G011940 vs. TrEMBL
Match: A0A0A0LZZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G638510 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47 Identity = 126/358 (35.20%), Postives = 190/358 (53.07%), Query Frame = 1
BLAST of ClCG03G011940 vs. TrEMBL
Match: A0A166C0F7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011877 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.6e-34 Identity = 116/377 (30.77%), Postives = 178/377 (47.21%), Query Frame = 1
BLAST of ClCG03G011940 vs. TrEMBL
Match: F6HYV5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00970 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 113/354 (31.92%), Postives = 179/354 (50.56%), Query Frame = 1
BLAST of ClCG03G011940 vs. TrEMBL
Match: A0A061GVR6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041206 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 6.5e-33 Identity = 114/378 (30.16%), Postives = 176/378 (46.56%), Query Frame = 1
BLAST of ClCG03G011940 vs. TrEMBL
Match: M5WZX8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019290mg PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30 Identity = 120/375 (32.00%), Postives = 176/375 (46.93%), Query Frame = 1
BLAST of ClCG03G011940 vs. TAIR10
Match: AT5G45470.1 (AT5G45470.1 Protein of unknown function (DUF594)) HSP 1 Score: 113.6 bits (283), Expect = 2.6e-25 Identity = 74/197 (37.56%), Postives = 106/197 (53.81%), Query Frame = 1
BLAST of ClCG03G011940 vs. TAIR10
Match: AT5G45480.1 (AT5G45480.1 Protein of unknown function (DUF594)) HSP 1 Score: 110.5 bits (275), Expect = 2.2e-24 Identity = 77/192 (40.10%), Postives = 106/192 (55.21%), Query Frame = 1
BLAST of ClCG03G011940 vs. TAIR10
Match: AT5G45530.1 (AT5G45530.1 Protein of unknown function (DUF594)) HSP 1 Score: 106.7 bits (265), Expect = 3.2e-23 Identity = 74/192 (38.54%), Postives = 97/192 (50.52%), Query Frame = 1
BLAST of ClCG03G011940 vs. TAIR10
Match: AT5G45540.1 (AT5G45540.1 Protein of unknown function (DUF594)) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-20 Identity = 73/204 (35.78%), Postives = 97/204 (47.55%), Query Frame = 1
BLAST of ClCG03G011940 vs. TAIR10
Match: AT4G19090.1 (AT4G19090.1 Protein of unknown function (DUF594)) HSP 1 Score: 92.0 bits (227), Expect = 8.2e-19 Identity = 64/187 (34.22%), Postives = 98/187 (52.41%), Query Frame = 1
BLAST of ClCG03G011940 vs. NCBI nr
Match: gi|449442759|ref|XP_004139148.1| (PREDICTED: uncharacterized protein LOC101222078 [Cucumis sativus]) HSP 1 Score: 196.8 bits (499), Expect = 6.7e-47 Identity = 126/358 (35.20%), Postives = 190/358 (53.07%), Query Frame = 1
BLAST of ClCG03G011940 vs. NCBI nr
Match: gi|659117652|ref|XP_008458716.1| (PREDICTED: uncharacterized protein LOC103498043 [Cucumis melo]) HSP 1 Score: 186.8 bits (473), Expect = 6.9e-44 Identity = 129/362 (35.64%), Postives = 189/362 (52.21%), Query Frame = 1
BLAST of ClCG03G011940 vs. NCBI nr
Match: gi|1021045340|gb|KZN03121.1| (hypothetical protein DCAR_011877 [Daucus carota subsp. sativus]) HSP 1 Score: 154.5 bits (389), Expect = 3.8e-34 Identity = 116/377 (30.77%), Postives = 178/377 (47.21%), Query Frame = 1
BLAST of ClCG03G011940 vs. NCBI nr
Match: gi|1009111920|ref|XP_015865713.1| (PREDICTED: uncharacterized protein LOC107403340 [Ziziphus jujuba]) HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33 Identity = 115/382 (30.10%), Postives = 174/382 (45.55%), Query Frame = 1
BLAST of ClCG03G011940 vs. NCBI nr
Match: gi|658053530|ref|XP_008362520.1| (PREDICTED: uncharacterized protein LOC103426202 [Malus domestica]) HSP 1 Score: 150.2 bits (378), Expect = 7.2e-33 Identity = 119/384 (30.99%), Postives = 185/384 (48.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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